Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G25260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032499: detection of peptidoglycan0.00E+00
2GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0043048: dolichyl monophosphate biosynthetic process0.00E+00
5GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
6GO:0033198: response to ATP0.00E+00
7GO:1900367: positive regulation of defense response to insect0.00E+00
8GO:0002764: immune response-regulating signaling pathway0.00E+00
9GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
10GO:0033587: shikimate biosynthetic process0.00E+00
11GO:0010200: response to chitin9.16E-08
12GO:0006468: protein phosphorylation3.98E-07
13GO:0080142: regulation of salicylic acid biosynthetic process2.00E-06
14GO:0042742: defense response to bacterium7.65E-06
15GO:0006952: defense response2.42E-05
16GO:0009751: response to salicylic acid2.96E-05
17GO:0031348: negative regulation of defense response4.31E-05
18GO:0046777: protein autophosphorylation6.23E-05
19GO:0060548: negative regulation of cell death1.54E-04
20GO:0045227: capsule polysaccharide biosynthetic process1.54E-04
21GO:0033358: UDP-L-arabinose biosynthetic process1.54E-04
22GO:0009611: response to wounding2.19E-04
23GO:0010225: response to UV-C2.36E-04
24GO:0009697: salicylic acid biosynthetic process2.36E-04
25GO:0009816: defense response to bacterium, incompatible interaction2.91E-04
26GO:0006470: protein dephosphorylation3.74E-04
27GO:0009617: response to bacterium4.10E-04
28GO:0010365: positive regulation of ethylene biosynthetic process5.34E-04
29GO:0051938: L-glutamate import5.34E-04
30GO:0046256: 2,4,6-trinitrotoluene catabolic process5.34E-04
31GO:0051245: negative regulation of cellular defense response5.34E-04
32GO:0019567: arabinose biosynthetic process5.34E-04
33GO:0015969: guanosine tetraphosphate metabolic process5.34E-04
34GO:0051180: vitamin transport5.34E-04
35GO:0099132: ATP hydrolysis coupled cation transmembrane transport5.34E-04
36GO:0010941: regulation of cell death5.34E-04
37GO:0010421: hydrogen peroxide-mediated programmed cell death5.34E-04
38GO:0030974: thiamine pyrophosphate transport5.34E-04
39GO:1901183: positive regulation of camalexin biosynthetic process5.34E-04
40GO:0032491: detection of molecule of fungal origin5.34E-04
41GO:0042759: long-chain fatty acid biosynthetic process5.34E-04
42GO:0009867: jasmonic acid mediated signaling pathway5.94E-04
43GO:0009787: regulation of abscisic acid-activated signaling pathway7.07E-04
44GO:0006887: exocytosis7.74E-04
45GO:2000031: regulation of salicylic acid mediated signaling pathway8.61E-04
46GO:0090333: regulation of stomatal closure1.03E-03
47GO:0046939: nucleotide phosphorylation1.15E-03
48GO:0080151: positive regulation of salicylic acid mediated signaling pathway1.15E-03
49GO:0015802: basic amino acid transport1.15E-03
50GO:0080185: effector dependent induction by symbiont of host immune response1.15E-03
51GO:0010618: aerenchyma formation1.15E-03
52GO:0010115: regulation of abscisic acid biosynthetic process1.15E-03
53GO:0015865: purine nucleotide transport1.15E-03
54GO:0010271: regulation of chlorophyll catabolic process1.15E-03
55GO:0010541: acropetal auxin transport1.15E-03
56GO:0019725: cellular homeostasis1.15E-03
57GO:0031349: positive regulation of defense response1.15E-03
58GO:0015893: drug transport1.15E-03
59GO:0002221: pattern recognition receptor signaling pathway1.15E-03
60GO:0043091: L-arginine import1.15E-03
61GO:1900426: positive regulation of defense response to bacterium1.21E-03
62GO:0010150: leaf senescence1.28E-03
63GO:0006032: chitin catabolic process1.41E-03
64GO:0009737: response to abscisic acid1.57E-03
65GO:0006904: vesicle docking involved in exocytosis1.59E-03
66GO:0006954: inflammatory response1.89E-03
67GO:0010498: proteasomal protein catabolic process1.89E-03
68GO:0016045: detection of bacterium1.89E-03
69GO:0034051: negative regulation of plant-type hypersensitive response1.89E-03
70GO:1900140: regulation of seedling development1.89E-03
71GO:0010359: regulation of anion channel activity1.89E-03
72GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.89E-03
73GO:0051176: positive regulation of sulfur metabolic process1.89E-03
74GO:0009626: plant-type hypersensitive response1.96E-03
75GO:0009620: response to fungus2.06E-03
76GO:0055046: microgametogenesis2.13E-03
77GO:0034605: cellular response to heat2.41E-03
78GO:0002237: response to molecule of bacterial origin2.41E-03
79GO:0009817: defense response to fungus, incompatible interaction2.59E-03
80GO:0009225: nucleotide-sugar metabolic process2.70E-03
81GO:0010167: response to nitrate2.70E-03
82GO:0070588: calcium ion transmembrane transport2.70E-03
83GO:0048194: Golgi vesicle budding2.73E-03
84GO:0046902: regulation of mitochondrial membrane permeability2.73E-03
85GO:0010306: rhamnogalacturonan II biosynthetic process2.73E-03
86GO:0006612: protein targeting to membrane2.73E-03
87GO:0072583: clathrin-dependent endocytosis2.73E-03
88GO:0071323: cellular response to chitin2.73E-03
89GO:0046513: ceramide biosynthetic process2.73E-03
90GO:0046836: glycolipid transport2.73E-03
91GO:0000187: activation of MAPK activity2.73E-03
92GO:0009863: salicylic acid mediated signaling pathway3.34E-03
93GO:0046345: abscisic acid catabolic process3.68E-03
94GO:0010483: pollen tube reception3.68E-03
95GO:0045088: regulation of innate immune response3.68E-03
96GO:0010363: regulation of plant-type hypersensitive response3.68E-03
97GO:0071219: cellular response to molecule of bacterial origin3.68E-03
98GO:0010508: positive regulation of autophagy3.68E-03
99GO:0007165: signal transduction3.69E-03
100GO:0016998: cell wall macromolecule catabolic process4.06E-03
101GO:0071456: cellular response to hypoxia4.45E-03
102GO:0010017: red or far-red light signaling pathway4.45E-03
103GO:0016226: iron-sulfur cluster assembly4.45E-03
104GO:2000022: regulation of jasmonic acid mediated signaling pathway4.45E-03
105GO:0018344: protein geranylgeranylation4.72E-03
106GO:0006012: galactose metabolic process4.85E-03
107GO:0051707: response to other organism4.85E-03
108GO:0009625: response to insect4.85E-03
109GO:1900425: negative regulation of defense response to bacterium5.86E-03
110GO:0010337: regulation of salicylic acid metabolic process5.86E-03
111GO:0018258: protein O-linked glycosylation via hydroxyproline5.86E-03
112GO:0002238: response to molecule of fungal origin5.86E-03
113GO:0010942: positive regulation of cell death5.86E-03
114GO:0010405: arabinogalactan protein metabolic process5.86E-03
115GO:0006855: drug transmembrane transport5.91E-03
116GO:0007166: cell surface receptor signaling pathway6.71E-03
117GO:0010555: response to mannitol7.07E-03
118GO:2000037: regulation of stomatal complex patterning7.07E-03
119GO:0010310: regulation of hydrogen peroxide metabolic process7.07E-03
120GO:2000067: regulation of root morphogenesis7.07E-03
121GO:0071470: cellular response to osmotic stress7.07E-03
122GO:0045926: negative regulation of growth7.07E-03
123GO:0009423: chorismate biosynthetic process7.07E-03
124GO:0006486: protein glycosylation7.11E-03
125GO:0009749: response to glucose7.72E-03
126GO:0009409: response to cold7.97E-03
127GO:0035556: intracellular signal transduction8.01E-03
128GO:0002229: defense response to oomycetes8.27E-03
129GO:0006891: intra-Golgi vesicle-mediated transport8.27E-03
130GO:0010193: response to ozone8.27E-03
131GO:0010161: red light signaling pathway8.37E-03
132GO:0071446: cellular response to salicylic acid stimulus8.37E-03
133GO:1900056: negative regulation of leaf senescence8.37E-03
134GO:0070370: cellular heat acclimation8.37E-03
135GO:0010928: regulation of auxin mediated signaling pathway9.75E-03
136GO:0030162: regulation of proteolysis9.75E-03
137GO:0045010: actin nucleation9.75E-03
138GO:0010099: regulation of photomorphogenesis1.12E-02
139GO:0009932: cell tip growth1.12E-02
140GO:0007186: G-protein coupled receptor signaling pathway1.12E-02
141GO:0010204: defense response signaling pathway, resistance gene-independent1.12E-02
142GO:0030968: endoplasmic reticulum unfolded protein response1.12E-02
143GO:0001666: response to hypoxia1.20E-02
144GO:0009742: brassinosteroid mediated signaling pathway1.20E-02
145GO:0009051: pentose-phosphate shunt, oxidative branch1.27E-02
146GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.27E-02
147GO:0006098: pentose-phosphate shunt1.27E-02
148GO:0046916: cellular transition metal ion homeostasis1.27E-02
149GO:0010112: regulation of systemic acquired resistance1.27E-02
150GO:0009060: aerobic respiration1.27E-02
151GO:0009627: systemic acquired resistance1.34E-02
152GO:0006950: response to stress1.42E-02
153GO:0048268: clathrin coat assembly1.43E-02
154GO:0048354: mucilage biosynthetic process involved in seed coat development1.43E-02
155GO:0010380: regulation of chlorophyll biosynthetic process1.43E-02
156GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.43E-02
157GO:0008219: cell death1.57E-02
158GO:0007064: mitotic sister chromatid cohesion1.60E-02
159GO:0009970: cellular response to sulfate starvation1.60E-02
160GO:0006535: cysteine biosynthetic process from serine1.60E-02
161GO:0043069: negative regulation of programmed cell death1.60E-02
162GO:0009682: induced systemic resistance1.77E-02
163GO:0009073: aromatic amino acid family biosynthetic process1.77E-02
164GO:0015770: sucrose transport1.77E-02
165GO:0000272: polysaccharide catabolic process1.77E-02
166GO:0009750: response to fructose1.77E-02
167GO:0048527: lateral root development1.82E-02
168GO:0010119: regulation of stomatal movement1.82E-02
169GO:0008361: regulation of cell size1.95E-02
170GO:0012501: programmed cell death1.95E-02
171GO:0015706: nitrate transport1.95E-02
172GO:0002213: defense response to insect1.95E-02
173GO:0010105: negative regulation of ethylene-activated signaling pathway1.95E-02
174GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.95E-02
175GO:0045087: innate immune response2.00E-02
176GO:0006829: zinc II ion transport2.14E-02
177GO:0009785: blue light signaling pathway2.14E-02
178GO:0006006: glucose metabolic process2.14E-02
179GO:2000028: regulation of photoperiodism, flowering2.14E-02
180GO:0010229: inflorescence development2.14E-02
181GO:0050832: defense response to fungus2.15E-02
182GO:0010540: basipetal auxin transport2.33E-02
183GO:0009266: response to temperature stimulus2.33E-02
184GO:0007034: vacuolar transport2.33E-02
185GO:0010053: root epidermal cell differentiation2.53E-02
186GO:0005985: sucrose metabolic process2.53E-02
187GO:0046854: phosphatidylinositol phosphorylation2.53E-02
188GO:0009744: response to sucrose2.58E-02
189GO:0009408: response to heat2.64E-02
190GO:0009414: response to water deprivation2.67E-02
191GO:0019344: cysteine biosynthetic process2.94E-02
192GO:0031347: regulation of defense response3.12E-02
193GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.12E-02
194GO:0009695: jasmonic acid biosynthetic process3.16E-02
195GO:0055085: transmembrane transport3.22E-02
196GO:0006812: cation transport3.24E-02
197GO:0009269: response to desiccation3.38E-02
198GO:0048278: vesicle docking3.38E-02
199GO:0003333: amino acid transmembrane transport3.38E-02
200GO:0009809: lignin biosynthetic process3.48E-02
201GO:0009814: defense response, incompatible interaction3.61E-02
202GO:0010227: floral organ abscission3.83E-02
203GO:0009873: ethylene-activated signaling pathway3.83E-02
204GO:0009909: regulation of flower development3.85E-02
205GO:0006284: base-excision repair4.07E-02
206GO:0009561: megagametogenesis4.07E-02
207GO:0006970: response to osmotic stress4.23E-02
208GO:0042147: retrograde transport, endosome to Golgi4.31E-02
209GO:0042631: cellular response to water deprivation4.55E-02
210GO:0042391: regulation of membrane potential4.55E-02
211GO:0006885: regulation of pH4.80E-02
212GO:0016567: protein ubiquitination4.85E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0004168: dolichol kinase activity0.00E+00
3GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
4GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
5GO:0010290: chlorophyll catabolite transmembrane transporter activity0.00E+00
6GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
7GO:0005522: profilin binding0.00E+00
8GO:0015431: glutathione S-conjugate-exporting ATPase activity0.00E+00
9GO:0004107: chorismate synthase activity0.00E+00
10GO:2001080: chitosan binding0.00E+00
11GO:0005212: structural constituent of eye lens0.00E+00
12GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
13GO:0004674: protein serine/threonine kinase activity3.38E-08
14GO:0016301: kinase activity1.96E-07
15GO:0070696: transmembrane receptor protein serine/threonine kinase binding4.43E-06
16GO:0005524: ATP binding8.11E-06
17GO:0004568: chitinase activity1.05E-04
18GO:0008559: xenobiotic-transporting ATPase activity1.31E-04
19GO:0019199: transmembrane receptor protein kinase activity1.54E-04
20GO:0050373: UDP-arabinose 4-epimerase activity1.54E-04
21GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.41E-04
22GO:0005509: calcium ion binding3.78E-04
23GO:0004012: phospholipid-translocating ATPase activity4.43E-04
24GO:0003978: UDP-glucose 4-epimerase activity4.43E-04
25GO:0033612: receptor serine/threonine kinase binding4.68E-04
26GO:0032050: clathrin heavy chain binding5.34E-04
27GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity5.34E-04
28GO:1901149: salicylic acid binding5.34E-04
29GO:0090422: thiamine pyrophosphate transporter activity5.34E-04
30GO:0004662: CAAX-protein geranylgeranyltransferase activity5.34E-04
31GO:0015085: calcium ion transmembrane transporter activity5.34E-04
32GO:0004714: transmembrane receptor protein tyrosine kinase activity7.07E-04
33GO:0005515: protein binding7.60E-04
34GO:0005525: GTP binding8.11E-04
35GO:0019901: protein kinase binding1.06E-03
36GO:0050291: sphingosine N-acyltransferase activity1.15E-03
37GO:0022821: potassium ion antiporter activity1.15E-03
38GO:0001671: ATPase activator activity1.15E-03
39GO:0008728: GTP diphosphokinase activity1.15E-03
40GO:0048531: beta-1,3-galactosyltransferase activity1.15E-03
41GO:0004672: protein kinase activity1.41E-03
42GO:0004722: protein serine/threonine phosphatase activity1.84E-03
43GO:0001664: G-protein coupled receptor binding1.89E-03
44GO:0016174: NAD(P)H oxidase activity1.89E-03
45GO:0046423: allene-oxide cyclase activity1.89E-03
46GO:0031683: G-protein beta/gamma-subunit complex binding1.89E-03
47GO:0016595: glutamate binding1.89E-03
48GO:0005388: calcium-transporting ATPase activity2.13E-03
49GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.13E-03
50GO:0003924: GTPase activity2.32E-03
51GO:0004190: aspartic-type endopeptidase activity2.70E-03
52GO:0008061: chitin binding2.70E-03
53GO:0009001: serine O-acetyltransferase activity2.73E-03
54GO:0015189: L-lysine transmembrane transporter activity2.73E-03
55GO:0017089: glycolipid transporter activity2.73E-03
56GO:0019201: nucleotide kinase activity2.73E-03
57GO:0015181: arginine transmembrane transporter activity2.73E-03
58GO:0015238: drug transmembrane transporter activity2.76E-03
59GO:0004842: ubiquitin-protein transferase activity3.20E-03
60GO:0043531: ADP binding3.26E-03
61GO:0004345: glucose-6-phosphate dehydrogenase activity3.68E-03
62GO:0051861: glycolipid binding3.68E-03
63GO:0005313: L-glutamate transmembrane transporter activity3.68E-03
64GO:0043424: protein histidine kinase binding3.69E-03
65GO:0045431: flavonol synthase activity4.72E-03
66GO:0008725: DNA-3-methyladenine glycosylase activity4.72E-03
67GO:0010294: abscisic acid glucosyltransferase activity4.72E-03
68GO:0005471: ATP:ADP antiporter activity4.72E-03
69GO:0004605: phosphatidate cytidylyltransferase activity5.86E-03
70GO:1990714: hydroxyproline O-galactosyltransferase activity5.86E-03
71GO:0035252: UDP-xylosyltransferase activity5.86E-03
72GO:0004017: adenylate kinase activity7.07E-03
73GO:0042626: ATPase activity, coupled to transmembrane movement of substances7.89E-03
74GO:0031625: ubiquitin protein ligase binding8.10E-03
75GO:0008506: sucrose:proton symporter activity8.37E-03
76GO:0043295: glutathione binding8.37E-03
77GO:0052747: sinapyl alcohol dehydrogenase activity9.75E-03
78GO:0004708: MAP kinase kinase activity9.75E-03
79GO:0004430: 1-phosphatidylinositol 4-kinase activity1.12E-02
80GO:0071949: FAD binding1.27E-02
81GO:0008375: acetylglucosaminyltransferase activity1.34E-02
82GO:0004721: phosphoprotein phosphatase activity1.42E-02
83GO:0004806: triglyceride lipase activity1.42E-02
84GO:0015112: nitrate transmembrane transporter activity1.43E-02
85GO:0015174: basic amino acid transmembrane transporter activity1.43E-02
86GO:0005545: 1-phosphatidylinositol binding1.60E-02
87GO:0008047: enzyme activator activity1.60E-02
88GO:0004713: protein tyrosine kinase activity1.60E-02
89GO:0008515: sucrose transmembrane transporter activity1.77E-02
90GO:0005543: phospholipid binding1.77E-02
91GO:0008378: galactosyltransferase activity1.95E-02
92GO:0004521: endoribonuclease activity1.95E-02
93GO:0045551: cinnamyl-alcohol dehydrogenase activity1.95E-02
94GO:0015297: antiporter activity2.11E-02
95GO:0031072: heat shock protein binding2.14E-02
96GO:0030552: cAMP binding2.53E-02
97GO:0030553: cGMP binding2.53E-02
98GO:0003954: NADH dehydrogenase activity2.94E-02
99GO:0051087: chaperone binding3.16E-02
100GO:0005216: ion channel activity3.16E-02
101GO:0008324: cation transmembrane transporter activity3.16E-02
102GO:0005215: transporter activity3.36E-02
103GO:0004707: MAP kinase activity3.38E-02
104GO:0019706: protein-cysteine S-palmitoyltransferase activity3.38E-02
105GO:0046982: protein heterodimerization activity3.77E-02
106GO:0008234: cysteine-type peptidase activity3.85E-02
107GO:0043565: sequence-specific DNA binding3.85E-02
108GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups4.23E-02
109GO:0005516: calmodulin binding4.25E-02
110GO:0005249: voltage-gated potassium channel activity4.55E-02
111GO:0030551: cyclic nucleotide binding4.55E-02
112GO:0005451: monovalent cation:proton antiporter activity4.55E-02
113GO:0046873: metal ion transmembrane transporter activity4.80E-02
114GO:0030276: clathrin binding4.80E-02
115GO:0046872: metal ion binding4.97E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane1.60E-11
2GO:0016021: integral component of membrane3.20E-04
3GO:0005911: cell-cell junction5.34E-04
4GO:0005953: CAAX-protein geranylgeranyltransferase complex5.34E-04
5GO:0031304: intrinsic component of mitochondrial inner membrane1.15E-03
6GO:0000145: exocyst1.25E-03
7GO:0042406: extrinsic component of endoplasmic reticulum membrane1.89E-03
8GO:0008287: protein serine/threonine phosphatase complex1.89E-03
9GO:0030139: endocytic vesicle1.89E-03
10GO:0031012: extracellular matrix2.13E-03
11GO:0070062: extracellular exosome2.73E-03
12GO:0000325: plant-type vacuole3.12E-03
13GO:0032580: Golgi cisterna membrane1.00E-02
14GO:0005887: integral component of plasma membrane1.36E-02
15GO:0005740: mitochondrial envelope1.60E-02
16GO:0030125: clathrin vesicle coat1.60E-02
17GO:0090404: pollen tube tip1.77E-02
18GO:0005578: proteinaceous extracellular matrix2.14E-02
19GO:0005795: Golgi stack2.53E-02
20GO:0030176: integral component of endoplasmic reticulum membrane2.53E-02
21GO:0043234: protein complex2.74E-02
22GO:0005758: mitochondrial intermembrane space2.94E-02
23GO:0005905: clathrin-coated pit3.38E-02
24GO:0010008: endosome membrane4.23E-02
25GO:0030136: clathrin-coated vesicle4.31E-02
26GO:0005834: heterotrimeric G-protein complex4.37E-02
27GO:0012505: endomembrane system4.78E-02
28GO:0005770: late endosome4.80E-02
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Gene type



Gene DE type