co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G24910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046680: response to DDT	0.00E+00
2	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0006654: phosphatidic acid biosynthetic process	0.00E+00
5	GO:0052386: cell wall thickening	0.00E+00
6	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
7	GO:0080149: sucrose induced translational repression	0.00E+00
8	GO:0097250: mitochondrial respiratory chain supercomplex assembly	0.00E+00
9	GO:0071669: plant-type cell wall organization or biogenesis	1.54E-04
10	GO:0006102: isocitrate metabolic process	1.97E-04
11	GO:0019478: D-amino acid catabolic process	2.25E-04
12	GO:0006680: glucosylceramide catabolic process	2.25E-04
13	GO:0006083: acetate metabolic process	2.25E-04
14	GO:0042350: GDP-L-fucose biosynthetic process	2.25E-04
15	GO:1990641: response to iron ion starvation	2.25E-04
16	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.25E-04
17	GO:0000032: cell wall mannoprotein biosynthetic process	2.25E-04
18	GO:0051607: defense response to virus	3.41E-04
19	GO:0006101: citrate metabolic process	5.00E-04
20	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.00E-04
21	GO:0015709: thiosulfate transport	5.00E-04
22	GO:0071422: succinate transmembrane transport	5.00E-04
23	GO:0009805: coumarin biosynthetic process	5.00E-04
24	GO:0042853: L-alanine catabolic process	5.00E-04
25	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	5.00E-04
26	GO:0006886: intracellular protein transport	6.08E-04
27	GO:0055046: microgametogenesis	6.19E-04
28	GO:0006099: tricarboxylic acid cycle	7.39E-04
29	GO:0006556: S-adenosylmethionine biosynthetic process	8.13E-04
30	GO:0061158: 3'-UTR-mediated mRNA destabilization	8.13E-04
31	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	8.13E-04
32	GO:0010253: UDP-rhamnose biosynthetic process	8.13E-04
33	GO:0006517: protein deglycosylation	8.13E-04
34	GO:0032504: multicellular organism reproduction	8.13E-04
35	GO:0010272: response to silver ion	8.13E-04
36	GO:0033591: response to L-ascorbic acid	8.13E-04
37	GO:0007275: multicellular organism development	8.82E-04
38	GO:0080024: indolebutyric acid metabolic process	1.16E-03
39	GO:0009298: GDP-mannose biosynthetic process	1.16E-03
40	GO:0070301: cellular response to hydrogen peroxide	1.16E-03
41	GO:0015729: oxaloacetate transport	1.16E-03
42	GO:0009226: nucleotide-sugar biosynthetic process	1.16E-03
43	GO:0015867: ATP transport	1.54E-03
44	GO:1902584: positive regulation of response to water deprivation	1.54E-03
45	GO:0033356: UDP-L-arabinose metabolic process	1.54E-03
46	GO:1901002: positive regulation of response to salt stress	1.54E-03
47	GO:0006097: glyoxylate cycle	1.97E-03
48	GO:0045927: positive regulation of growth	1.97E-03
49	GO:0071423: malate transmembrane transport	1.97E-03
50	GO:0035435: phosphate ion transmembrane transport	2.43E-03
51	GO:0015866: ADP transport	2.43E-03
52	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	2.43E-03
53	GO:0006555: methionine metabolic process	2.43E-03
54	GO:0010315: auxin efflux	2.43E-03
55	GO:0009082: branched-chain amino acid biosynthetic process	2.91E-03
56	GO:0017148: negative regulation of translation	2.91E-03
57	GO:0009099: valine biosynthetic process	2.91E-03
58	GO:0080113: regulation of seed growth	2.91E-03
59	GO:0019509: L-methionine salvage from methylthioadenosine	2.91E-03
60	GO:0030643: cellular phosphate ion homeostasis	2.91E-03
61	GO:0034389: lipid particle organization	2.91E-03
62	GO:0050829: defense response to Gram-negative bacterium	3.43E-03
63	GO:0006744: ubiquinone biosynthetic process	3.43E-03
64	GO:0080186: developmental vegetative growth	3.43E-03
65	GO:0008272: sulfate transport	3.43E-03
66	GO:0009816: defense response to bacterium, incompatible interaction	3.50E-03
67	GO:0015031: protein transport	3.62E-03
68	GO:0006491: N-glycan processing	3.98E-03
69	GO:0006605: protein targeting	3.98E-03
70	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.98E-03
71	GO:0009819: drought recovery	3.98E-03
72	GO:0010417: glucuronoxylan biosynthetic process	4.56E-03
73	GO:0009097: isoleucine biosynthetic process	4.56E-03
74	GO:0009699: phenylpropanoid biosynthetic process	4.56E-03
75	GO:0006002: fructose 6-phosphate metabolic process	4.56E-03
76	GO:0010043: response to zinc ion	4.98E-03
77	GO:0009056: catabolic process	5.16E-03
78	GO:0046686: response to cadmium ion	5.39E-03
79	GO:0009098: leucine biosynthetic process	5.79E-03
80	GO:0006839: mitochondrial transport	6.22E-03
81	GO:0006032: chitin catabolic process	6.45E-03
82	GO:0009688: abscisic acid biosynthetic process	6.45E-03
83	GO:0051555: flavonol biosynthetic process	6.45E-03
84	GO:0006631: fatty acid metabolic process	6.49E-03
85	GO:0042542: response to hydrogen peroxide	6.76E-03
86	GO:0009744: response to sucrose	7.04E-03
87	GO:0051707: response to other organism	7.04E-03
88	GO:0006415: translational termination	7.13E-03
89	GO:0000272: polysaccharide catabolic process	7.13E-03
90	GO:0000209: protein polyubiquitination	7.32E-03
91	GO:0045037: protein import into chloroplast stroma	7.84E-03
92	GO:0009636: response to toxic substance	7.91E-03
93	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	8.53E-03
94	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	8.57E-03
95	GO:0034605: cellular response to heat	9.33E-03
96	GO:0019853: L-ascorbic acid biosynthetic process	1.01E-02
97	GO:0090351: seedling development	1.01E-02
98	GO:0010053: root epidermal cell differentiation	1.01E-02
99	GO:0009225: nucleotide-sugar metabolic process	1.01E-02
100	GO:0016192: vesicle-mediated transport	1.06E-02
101	GO:0000162: tryptophan biosynthetic process	1.09E-02
102	GO:0034976: response to endoplasmic reticulum stress	1.09E-02
103	GO:0030150: protein import into mitochondrial matrix	1.17E-02
104	GO:0009620: response to fungus	1.24E-02
105	GO:0051302: regulation of cell division	1.26E-02
106	GO:0008299: isoprenoid biosynthetic process	1.26E-02
107	GO:0006874: cellular calcium ion homeostasis	1.26E-02
108	GO:0006457: protein folding	1.32E-02
109	GO:0016998: cell wall macromolecule catabolic process	1.34E-02
110	GO:0019915: lipid storage	1.34E-02
111	GO:0006730: one-carbon metabolic process	1.43E-02
112	GO:0030433: ubiquitin-dependent ERAD pathway	1.43E-02
113	GO:0019748: secondary metabolic process	1.43E-02
114	GO:0030245: cellulose catabolic process	1.43E-02
115	GO:0006810: transport	1.52E-02
116	GO:0009411: response to UV	1.53E-02
117	GO:0009693: ethylene biosynthetic process	1.53E-02
118	GO:0009561: megagametogenesis	1.62E-02
119	GO:0042127: regulation of cell proliferation	1.62E-02
120	GO:0010051: xylem and phloem pattern formation	1.81E-02
121	GO:0010118: stomatal movement	1.81E-02
122	GO:0010182: sugar mediated signaling pathway	1.91E-02
123	GO:0045489: pectin biosynthetic process	1.91E-02
124	GO:0009646: response to absence of light	2.01E-02
125	GO:0006623: protein targeting to vacuole	2.11E-02
126	GO:0010193: response to ozone	2.22E-02
127	GO:0006635: fatty acid beta-oxidation	2.22E-02
128	GO:0016032: viral process	2.32E-02
129	GO:0010150: leaf senescence	2.35E-02
130	GO:0009651: response to salt stress	2.36E-02
131	GO:0071281: cellular response to iron ion	2.43E-02
132	GO:0006464: cellular protein modification process	2.54E-02
133	GO:0019760: glucosinolate metabolic process	2.54E-02
134	GO:0009617: response to bacterium	2.80E-02
135	GO:0001666: response to hypoxia	2.88E-02
136	GO:0009615: response to virus	2.88E-02
137	GO:0009627: systemic acquired resistance	3.12E-02
138	GO:0016311: dephosphorylation	3.36E-02
139	GO:0030244: cellulose biosynthetic process	3.48E-02
140	GO:0009817: defense response to fungus, incompatible interaction	3.48E-02
141	GO:0009832: plant-type cell wall biogenesis	3.61E-02
142	GO:0009407: toxin catabolic process	3.73E-02
143	GO:0007568: aging	3.86E-02
144	GO:0006970: response to osmotic stress	3.91E-02
145	GO:0045893: positive regulation of transcription, DNA-templated	3.97E-02
146	GO:0045087: innate immune response	4.12E-02
147	GO:0016051: carbohydrate biosynthetic process	4.12E-02
148	GO:0010114: response to red light	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0051499: D-aminoacyl-tRNA deacylase activity	0.00E+00
2	GO:0016504: peptidase activator activity	0.00E+00
3	GO:0034338: short-chain carboxylesterase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
6	GO:0008320: protein transmembrane transporter activity	2.52E-06
7	GO:0004476: mannose-6-phosphate isomerase activity	2.25E-04
8	GO:0004348: glucosylceramidase activity	2.25E-04
9	GO:0009000: selenocysteine lyase activity	2.25E-04
10	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.25E-04
11	GO:0050577: GDP-L-fucose synthase activity	2.25E-04
12	GO:0003987: acetate-CoA ligase activity	2.25E-04
13	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.25E-04
14	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.25E-04
15	GO:0015117: thiosulfate transmembrane transporter activity	5.00E-04
16	GO:1901677: phosphate transmembrane transporter activity	5.00E-04
17	GO:0010297: heteropolysaccharide binding	5.00E-04
18	GO:0008460: dTDP-glucose 4,6-dehydratase activity	5.00E-04
19	GO:0003994: aconitate hydratase activity	5.00E-04
20	GO:0010280: UDP-L-rhamnose synthase activity	5.00E-04
21	GO:0050347: trans-octaprenyltranstransferase activity	5.00E-04
22	GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity	5.00E-04
23	GO:0000774: adenyl-nucleotide exchange factor activity	5.00E-04
24	GO:0008805: carbon-monoxide oxygenase activity	5.00E-04
25	GO:0052691: UDP-arabinopyranose mutase activity	5.00E-04
26	GO:0050377: UDP-glucose 4,6-dehydratase activity	5.00E-04
27	GO:1990585: hydroxyproline O-arabinosyltransferase activity	5.00E-04
28	GO:0004478: methionine adenosyltransferase activity	8.13E-04
29	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	8.13E-04
30	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	8.13E-04
31	GO:0005310: dicarboxylic acid transmembrane transporter activity	8.13E-04
32	GO:0015141: succinate transmembrane transporter activity	8.13E-04
33	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.16E-03
34	GO:0016149: translation release factor activity, codon specific	1.16E-03
35	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.16E-03
36	GO:0052656: L-isoleucine transaminase activity	1.16E-03
37	GO:0052654: L-leucine transaminase activity	1.16E-03
38	GO:0017077: oxidative phosphorylation uncoupler activity	1.16E-03
39	GO:0052655: L-valine transaminase activity	1.16E-03
40	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.16E-03
41	GO:0015131: oxaloacetate transmembrane transporter activity	1.16E-03
42	GO:0016866: intramolecular transferase activity	1.54E-03
43	GO:0004659: prenyltransferase activity	1.54E-03
44	GO:0004084: branched-chain-amino-acid transaminase activity	1.54E-03
45	GO:0070628: proteasome binding	1.54E-03
46	GO:0004623: phospholipase A2 activity	1.97E-03
47	GO:0030151: molybdenum ion binding	1.97E-03
48	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.97E-03
49	GO:0016853: isomerase activity	2.00E-03
50	GO:0016208: AMP binding	2.43E-03
51	GO:0005347: ATP transmembrane transporter activity	2.91E-03
52	GO:0004656: procollagen-proline 4-dioxygenase activity	2.91E-03
53	GO:0015217: ADP transmembrane transporter activity	2.91E-03
54	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.91E-03
55	GO:0003872: 6-phosphofructokinase activity	3.43E-03
56	GO:0015140: malate transmembrane transporter activity	3.43E-03
57	GO:0052747: sinapyl alcohol dehydrogenase activity	3.98E-03
58	GO:0004630: phospholipase D activity	4.56E-03
59	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.56E-03
60	GO:0003747: translation release factor activity	5.16E-03
61	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	5.46E-03
62	GO:0045309: protein phosphorylated amino acid binding	5.79E-03
63	GO:0004568: chitinase activity	6.45E-03
64	GO:0019904: protein domain specific binding	7.13E-03
65	GO:0004161: dimethylallyltranstransferase activity	7.13E-03
66	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.84E-03
67	GO:0015116: sulfate transmembrane transporter activity	7.84E-03
68	GO:0031624: ubiquitin conjugating enzyme binding	9.33E-03
69	GO:0008061: chitin binding	1.01E-02
70	GO:0003712: transcription cofactor activity	1.01E-02
71	GO:0005217: intracellular ligand-gated ion channel activity	1.01E-02
72	GO:0004970: ionotropic glutamate receptor activity	1.01E-02
73	GO:0004867: serine-type endopeptidase inhibitor activity	1.01E-02
74	GO:0031625: ubiquitin protein ligase binding	1.05E-02
75	GO:0061630: ubiquitin protein ligase activity	1.06E-02
76	GO:0031418: L-ascorbic acid binding	1.17E-02
77	GO:0051087: chaperone binding	1.26E-02
78	GO:0022857: transmembrane transporter activity	1.28E-02
79	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.43E-02
80	GO:0008810: cellulase activity	1.53E-02
81	GO:0005507: copper ion binding	1.53E-02
82	GO:0016760: cellulose synthase (UDP-forming) activity	1.53E-02
83	GO:0003727: single-stranded RNA binding	1.62E-02
84	GO:0003756: protein disulfide isomerase activity	1.62E-02
85	GO:0005102: receptor binding	1.71E-02
86	GO:0030170: pyridoxal phosphate binding	1.89E-02
87	GO:0050662: coenzyme binding	2.01E-02
88	GO:0015297: antiporter activity	2.24E-02
89	GO:0004518: nuclease activity	2.32E-02
90	GO:0016791: phosphatase activity	2.54E-02
91	GO:0044212: transcription regulatory region DNA binding	2.58E-02
92	GO:0016887: ATPase activity	2.83E-02
93	GO:0051213: dioxygenase activity	2.88E-02
94	GO:0003824: catalytic activity	2.96E-02
95	GO:0046872: metal ion binding	3.07E-02
96	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.24E-02
97	GO:0004806: triglyceride lipase activity	3.24E-02
98	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.48E-02
99	GO:0003746: translation elongation factor activity	4.12E-02
100	GO:0050660: flavin adenine dinucleotide binding	4.19E-02
101	GO:0003993: acid phosphatase activity	4.25E-02
102	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.39E-02
103	GO:0051539: 4 iron, 4 sulfur cluster binding	4.52E-02
104	GO:0003729: mRNA binding	4.59E-02
105	GO:0004364: glutathione transferase activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005789: endoplasmic reticulum membrane	2.44E-05
2	GO:0005783: endoplasmic reticulum	1.35E-04
3	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	1.54E-04
4	GO:0001405: presequence translocase-associated import motor	2.25E-04
5	GO:0000138: Golgi trans cisterna	2.25E-04
6	GO:0045252: oxoglutarate dehydrogenase complex	2.25E-04
7	GO:0005794: Golgi apparatus	2.69E-04
8	GO:0030134: ER to Golgi transport vesicle	5.00E-04
9	GO:0030132: clathrin coat of coated pit	8.13E-04
10	GO:0030130: clathrin coat of trans-Golgi network vesicle	8.13E-04
11	GO:0030658: transport vesicle membrane	1.16E-03
12	GO:0005945: 6-phosphofructokinase complex	1.97E-03
13	GO:0016592: mediator complex	2.45E-03
14	GO:0032580: Golgi cisterna membrane	2.78E-03
15	GO:0005801: cis-Golgi network	2.91E-03
16	GO:0009986: cell surface	3.43E-03
17	GO:0005788: endoplasmic reticulum lumen	3.50E-03
18	GO:0005811: lipid particle	4.56E-03
19	GO:0009514: glyoxysome	4.56E-03
20	GO:0005779: integral component of peroxisomal membrane	4.56E-03
21	GO:0030665: clathrin-coated vesicle membrane	5.79E-03
22	GO:0008540: proteasome regulatory particle, base subcomplex	5.79E-03
23	GO:0005829: cytosol	6.15E-03
24	GO:0017119: Golgi transport complex	6.45E-03
25	GO:0031902: late endosome membrane	6.49E-03
26	GO:0009506: plasmodesma	6.95E-03
27	GO:0005886: plasma membrane	7.52E-03
28	GO:0016020: membrane	8.12E-03
29	GO:0016021: integral component of membrane	8.65E-03
30	GO:0005795: Golgi stack	1.01E-02
31	GO:0005737: cytoplasm	1.10E-02
32	GO:0005839: proteasome core complex	1.34E-02
33	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.62E-02
34	GO:0019898: extrinsic component of membrane	2.11E-02
35	GO:0031965: nuclear membrane	2.11E-02
36	GO:0071944: cell periphery	2.43E-02
37	GO:0005774: vacuolar membrane	2.51E-02
38	GO:0005615: extracellular space	2.63E-02
39	GO:0000151: ubiquitin ligase complex	3.48E-02
40	GO:0009707: chloroplast outer membrane	3.48E-02
41	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.98E-02