Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G24530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010055: atrichoblast differentiation0.00E+00
2GO:0006654: phosphatidic acid biosynthetic process0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:1902289: negative regulation of defense response to oomycetes0.00E+00
6GO:0005993: trehalose catabolic process0.00E+00
7GO:0043620: regulation of DNA-templated transcription in response to stress0.00E+00
8GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
9GO:0052386: cell wall thickening0.00E+00
10GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
11GO:0019427: acetyl-CoA biosynthetic process from acetate0.00E+00
12GO:0046865: terpenoid transport0.00E+00
13GO:0018063: cytochrome c-heme linkage0.00E+00
14GO:0010793: regulation of mRNA export from nucleus0.00E+00
15GO:1902009: positive regulation of toxin transport0.00E+00
16GO:0051707: response to other organism3.46E-05
17GO:0051607: defense response to virus8.04E-05
18GO:0000162: tryptophan biosynthetic process1.32E-04
19GO:0009751: response to salicylic acid1.40E-04
20GO:0009759: indole glucosinolate biosynthetic process1.74E-04
21GO:0006631: fatty acid metabolic process2.92E-04
22GO:1900057: positive regulation of leaf senescence3.06E-04
23GO:1990641: response to iron ion starvation3.52E-04
24GO:0010230: alternative respiration3.52E-04
25GO:0046246: terpene biosynthetic process3.52E-04
26GO:0050691: regulation of defense response to virus by host3.52E-04
27GO:0006680: glucosylceramide catabolic process3.52E-04
28GO:0006083: acetate metabolic process3.52E-04
29GO:0032107: regulation of response to nutrient levels3.52E-04
30GO:0006102: isocitrate metabolic process3.84E-04
31GO:0006605: protein targeting3.84E-04
32GO:0006623: protein targeting to vacuole4.83E-04
33GO:0015031: protein transport4.95E-04
34GO:0010193: response to ozone5.27E-04
35GO:0010112: regulation of systemic acquired resistance5.65E-04
36GO:0080151: positive regulation of salicylic acid mediated signaling pathway7.67E-04
37GO:0055088: lipid homeostasis7.67E-04
38GO:0050684: regulation of mRNA processing7.67E-04
39GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex7.67E-04
40GO:0015908: fatty acid transport7.67E-04
41GO:0006101: citrate metabolic process7.67E-04
42GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.67E-04
43GO:0051252: regulation of RNA metabolic process7.67E-04
44GO:0071668: plant-type cell wall assembly7.67E-04
45GO:0042742: defense response to bacterium8.60E-04
46GO:0009684: indoleacetic acid biosynthetic process8.95E-04
47GO:0045037: protein import into chloroplast stroma1.02E-03
48GO:0015783: GDP-fucose transport1.24E-03
49GO:0032504: multicellular organism reproduction1.24E-03
50GO:0010476: gibberellin mediated signaling pathway1.24E-03
51GO:0010325: raffinose family oligosaccharide biosynthetic process1.24E-03
52GO:0009410: response to xenobiotic stimulus1.24E-03
53GO:0015692: lead ion transport1.24E-03
54GO:0080168: abscisic acid transport1.24E-03
55GO:0032784: regulation of DNA-templated transcription, elongation1.24E-03
56GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway1.24E-03
57GO:0080163: regulation of protein serine/threonine phosphatase activity1.24E-03
58GO:0061158: 3'-UTR-mediated mRNA destabilization1.24E-03
59GO:0071398: cellular response to fatty acid1.24E-03
60GO:0002237: response to molecule of bacterial origin1.30E-03
61GO:0006099: tricarboxylic acid cycle1.67E-03
62GO:0070301: cellular response to hydrogen peroxide1.79E-03
63GO:0071323: cellular response to chitin1.79E-03
64GO:0080024: indolebutyric acid metabolic process1.79E-03
65GO:0055070: copper ion homeostasis1.79E-03
66GO:0001676: long-chain fatty acid metabolic process1.79E-03
67GO:0010116: positive regulation of abscisic acid biosynthetic process1.79E-03
68GO:0006874: cellular calcium ion homeostasis1.98E-03
69GO:0071456: cellular response to hypoxia2.38E-03
70GO:0009939: positive regulation of gibberellic acid mediated signaling pathway2.40E-03
71GO:0048830: adventitious root development2.40E-03
72GO:0006621: protein retention in ER lumen2.40E-03
73GO:1901002: positive regulation of response to salt stress2.40E-03
74GO:0015867: ATP transport2.40E-03
75GO:0006097: glyoxylate cycle3.07E-03
76GO:0009229: thiamine diphosphate biosynthetic process3.07E-03
77GO:0008152: metabolic process3.14E-03
78GO:0015866: ADP transport3.79E-03
79GO:0006777: Mo-molybdopterin cofactor biosynthetic process3.79E-03
80GO:0010256: endomembrane system organization3.79E-03
81GO:1900425: negative regulation of defense response to bacterium3.79E-03
82GO:0009228: thiamine biosynthetic process3.79E-03
83GO:0006014: D-ribose metabolic process3.79E-03
84GO:0030643: cellular phosphate ion homeostasis4.57E-03
85GO:0006970: response to osmotic stress4.57E-03
86GO:0048444: floral organ morphogenesis4.57E-03
87GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.40E-03
88GO:1900056: negative regulation of leaf senescence5.40E-03
89GO:0000122: negative regulation of transcription from RNA polymerase II promoter5.40E-03
90GO:0006333: chromatin assembly or disassembly5.40E-03
91GO:1902074: response to salt5.40E-03
92GO:0010044: response to aluminum ion5.40E-03
93GO:0016559: peroxisome fission6.27E-03
94GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline6.27E-03
95GO:0009819: drought recovery6.27E-03
96GO:0009850: auxin metabolic process6.27E-03
97GO:0045010: actin nucleation6.27E-03
98GO:0031540: regulation of anthocyanin biosynthetic process6.27E-03
99GO:0009816: defense response to bacterium, incompatible interaction6.74E-03
100GO:0009627: systemic acquired resistance7.12E-03
101GO:0010208: pollen wall assembly7.19E-03
102GO:0010120: camalexin biosynthetic process7.19E-03
103GO:0010417: glucuronoxylan biosynthetic process7.19E-03
104GO:0006997: nucleus organization7.19E-03
105GO:0010204: defense response signaling pathway, resistance gene-independent7.19E-03
106GO:0017004: cytochrome complex assembly7.19E-03
107GO:0006886: intracellular protein transport7.80E-03
108GO:0016311: dephosphorylation7.91E-03
109GO:0015780: nucleotide-sugar transport8.16E-03
110GO:0009835: fruit ripening8.16E-03
111GO:0007338: single fertilization8.16E-03
112GO:0009056: catabolic process8.16E-03
113GO:0000902: cell morphogenesis8.16E-03
114GO:0006979: response to oxidative stress8.43E-03
115GO:0009086: methionine biosynthetic process9.17E-03
116GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway9.17E-03
117GO:0008202: steroid metabolic process9.17E-03
118GO:0040008: regulation of growth9.47E-03
119GO:0010150: leaf senescence1.01E-02
120GO:0009641: shade avoidance1.02E-02
121GO:0010629: negative regulation of gene expression1.02E-02
122GO:0051555: flavonol biosynthetic process1.02E-02
123GO:0009870: defense response signaling pathway, resistance gene-dependent1.02E-02
124GO:0009688: abscisic acid biosynthetic process1.02E-02
125GO:0009682: induced systemic resistance1.13E-02
126GO:0052544: defense response by callose deposition in cell wall1.13E-02
127GO:0019684: photosynthesis, light reaction1.13E-02
128GO:0009753: response to jasmonic acid1.14E-02
129GO:0006508: proteolysis1.22E-02
130GO:0071365: cellular response to auxin stimulus1.25E-02
131GO:0000266: mitochondrial fission1.25E-02
132GO:0009617: response to bacterium1.26E-02
133GO:0042542: response to hydrogen peroxide1.31E-02
134GO:2000012: regulation of auxin polar transport1.37E-02
135GO:0009651: response to salt stress1.49E-02
136GO:0007015: actin filament organization1.49E-02
137GO:0009636: response to toxic substance1.54E-02
138GO:0006855: drug transmembrane transport1.60E-02
139GO:0090351: seedling development1.61E-02
140GO:0031347: regulation of defense response1.66E-02
141GO:0009863: salicylic acid mediated signaling pathway1.88E-02
142GO:0030150: protein import into mitochondrial matrix1.88E-02
143GO:0006289: nucleotide-excision repair1.88E-02
144GO:0051302: regulation of cell division2.01E-02
145GO:0009723: response to ethylene2.11E-02
146GO:0006334: nucleosome assembly2.15E-02
147GO:0009269: response to desiccation2.15E-02
148GO:0016114: terpenoid biosynthetic process2.15E-02
149GO:0009814: defense response, incompatible interaction2.29E-02
150GO:0016226: iron-sulfur cluster assembly2.29E-02
151GO:0031348: negative regulation of defense response2.29E-02
152GO:0010200: response to chitin2.40E-02
153GO:0009620: response to fungus2.40E-02
154GO:0006012: galactose metabolic process2.44E-02
155GO:0009693: ethylene biosynthetic process2.44E-02
156GO:0016192: vesicle-mediated transport2.45E-02
157GO:0009611: response to wounding2.50E-02
158GO:0010118: stomatal movement2.90E-02
159GO:0010051: xylem and phloem pattern formation2.90E-02
160GO:0007275: multicellular organism development3.01E-02
161GO:0045489: pectin biosynthetic process3.06E-02
162GO:0006520: cellular amino acid metabolic process3.06E-02
163GO:0010182: sugar mediated signaling pathway3.06E-02
164GO:0019252: starch biosynthetic process3.39E-02
165GO:0009737: response to abscisic acid3.49E-02
166GO:0071554: cell wall organization or biogenesis3.55E-02
167GO:0002229: defense response to oomycetes3.55E-02
168GO:0000302: response to reactive oxygen species3.55E-02
169GO:0006635: fatty acid beta-oxidation3.55E-02
170GO:0009567: double fertilization forming a zygote and endosperm4.07E-02
171GO:0010029: regulation of seed germination4.80E-02
RankGO TermAdjusted P value
1GO:0097007: 4,8,12-trimethyltrideca-1,3,7,11-tetraene synthase activity0.00E+00
2GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
3GO:0004555: alpha,alpha-trehalase activity0.00E+00
4GO:0050334: thiaminase activity0.00E+00
5GO:0005046: KDEL sequence binding0.00E+00
6GO:0097008: (3E)-4,8-dimethyl-1,3,7-nonatriene synthase activity0.00E+00
7GO:0034338: short-chain carboxylesterase activity0.00E+00
8GO:0102391: decanoate--CoA ligase activity2.36E-04
9GO:0008320: protein transmembrane transporter activity3.06E-04
10GO:0004467: long-chain fatty acid-CoA ligase activity3.06E-04
11GO:0016229: steroid dehydrogenase activity3.52E-04
12GO:0010179: IAA-Ala conjugate hydrolase activity3.52E-04
13GO:0003987: acetate-CoA ligase activity3.52E-04
14GO:0004425: indole-3-glycerol-phosphate synthase activity3.52E-04
15GO:0015927: trehalase activity3.52E-04
16GO:0070401: NADP+ binding3.52E-04
17GO:0004348: glucosylceramidase activity3.52E-04
18GO:0047150: betaine-homocysteine S-methyltransferase activity3.52E-04
19GO:0009000: selenocysteine lyase activity3.52E-04
20GO:0015245: fatty acid transporter activity3.52E-04
21GO:0016920: pyroglutamyl-peptidase activity3.52E-04
22GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.52E-04
23GO:0047893: flavonol 3-O-glucosyltransferase activity3.84E-04
24GO:0003994: aconitate hydratase activity7.67E-04
25GO:0032934: sterol binding7.67E-04
26GO:0008428: ribonuclease inhibitor activity7.67E-04
27GO:0050736: O-malonyltransferase activity7.67E-04
28GO:0015036: disulfide oxidoreductase activity7.67E-04
29GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity7.67E-04
30GO:0010331: gibberellin binding7.67E-04
31GO:0016758: transferase activity, transferring hexosyl groups1.23E-03
32GO:0005457: GDP-fucose transmembrane transporter activity1.24E-03
33GO:0008265: Mo-molybdopterin cofactor sulfurase activity1.24E-03
34GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity1.24E-03
35GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.24E-03
36GO:0032403: protein complex binding1.24E-03
37GO:0005217: intracellular ligand-gated ion channel activity1.45E-03
38GO:0004970: ionotropic glutamate receptor activity1.45E-03
39GO:0035529: NADH pyrophosphatase activity1.79E-03
40GO:0004449: isocitrate dehydrogenase (NAD+) activity1.79E-03
41GO:0030527: structural constituent of chromatin1.79E-03
42GO:0008106: alcohol dehydrogenase (NADP+) activity1.79E-03
43GO:0010178: IAA-amino acid conjugate hydrolase activity1.79E-03
44GO:0016656: monodehydroascorbate reductase (NADH) activity1.79E-03
45GO:0031418: L-ascorbic acid binding1.80E-03
46GO:0001046: core promoter sequence-specific DNA binding1.80E-03
47GO:0035251: UDP-glucosyltransferase activity2.18E-03
48GO:0004834: tryptophan synthase activity2.40E-03
49GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor2.40E-03
50GO:0046923: ER retention sequence binding2.40E-03
51GO:0008194: UDP-glycosyltransferase activity2.48E-03
52GO:0030151: molybdenum ion binding3.07E-03
53GO:0008948: oxaloacetate decarboxylase activity3.07E-03
54GO:0004623: phospholipase A2 activity3.07E-03
55GO:0047631: ADP-ribose diphosphatase activity3.07E-03
56GO:0000210: NAD+ diphosphatase activity3.79E-03
57GO:0016208: AMP binding3.79E-03
58GO:0080043: quercetin 3-O-glucosyltransferase activity4.46E-03
59GO:0080044: quercetin 7-O-glucosyltransferase activity4.46E-03
60GO:0015217: ADP transmembrane transporter activity4.57E-03
61GO:0004747: ribokinase activity4.57E-03
62GO:0003978: UDP-glucose 4-epimerase activity4.57E-03
63GO:0005347: ATP transmembrane transporter activity4.57E-03
64GO:0004656: procollagen-proline 4-dioxygenase activity4.57E-03
65GO:0016791: phosphatase activity5.34E-03
66GO:0102425: myricetin 3-O-glucosyltransferase activity5.40E-03
67GO:0102360: daphnetin 3-O-glucosyltransferase activity5.40E-03
68GO:0008483: transaminase activity5.67E-03
69GO:0008237: metallopeptidase activity5.67E-03
70GO:0052747: sinapyl alcohol dehydrogenase activity6.27E-03
71GO:0004033: aldo-keto reductase (NADP) activity6.27E-03
72GO:0008865: fructokinase activity6.27E-03
73GO:0008142: oxysterol binding7.19E-03
74GO:0030247: polysaccharide binding7.51E-03
75GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity8.16E-03
76GO:0015297: antiporter activity9.47E-03
77GO:0004864: protein phosphatase inhibitor activity1.02E-02
78GO:0003993: acid phosphatase activity1.11E-02
79GO:0051539: 4 iron, 4 sulfur cluster binding1.21E-02
80GO:0045551: cinnamyl-alcohol dehydrogenase activity1.25E-02
81GO:0005198: structural molecule activity1.54E-02
82GO:0008061: chitin binding1.61E-02
83GO:0003712: transcription cofactor activity1.61E-02
84GO:0043565: sequence-specific DNA binding1.72E-02
85GO:0051536: iron-sulfur cluster binding1.88E-02
86GO:0003682: chromatin binding1.88E-02
87GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.29E-02
88GO:0008810: cellulase activity2.44E-02
89GO:0004499: N,N-dimethylaniline monooxygenase activity2.59E-02
90GO:0003727: single-stranded RNA binding2.59E-02
91GO:0005102: receptor binding2.74E-02
92GO:0005215: transporter activity2.88E-02
93GO:0042803: protein homodimerization activity3.05E-02
94GO:0010181: FMN binding3.22E-02
95GO:0004722: protein serine/threonine phosphatase activity3.23E-02
96GO:0016740: transferase activity3.24E-02
97GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.38E-02
98GO:0004872: receptor activity3.39E-02
99GO:0030170: pyridoxal phosphate binding3.65E-02
100GO:0016413: O-acetyltransferase activity4.43E-02
RankGO TermAdjusted P value
1GO:0005794: Golgi apparatus2.17E-05
2GO:0016021: integral component of membrane5.18E-05
3GO:0005801: cis-Golgi network2.36E-04
4GO:0005789: endoplasmic reticulum membrane2.54E-04
5GO:0045252: oxoglutarate dehydrogenase complex3.52E-04
6GO:0031314: extrinsic component of mitochondrial inner membrane7.67E-04
7GO:0030134: ER to Golgi transport vesicle7.67E-04
8GO:0017119: Golgi transport complex7.77E-04
9GO:0042406: extrinsic component of endoplasmic reticulum membrane1.24E-03
10GO:0030658: transport vesicle membrane1.79E-03
11GO:0005743: mitochondrial inner membrane2.33E-03
12GO:0000813: ESCRT I complex3.07E-03
13GO:0000164: protein phosphatase type 1 complex3.07E-03
14GO:0005783: endoplasmic reticulum3.37E-03
15GO:0031965: nuclear membrane4.11E-03
16GO:0005885: Arp2/3 protein complex4.57E-03
17GO:0005802: trans-Golgi network5.25E-03
18GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.40E-03
19GO:0009986: cell surface5.40E-03
20GO:0005623: cell6.89E-03
21GO:0009514: glyoxysome7.19E-03
22GO:0005779: integral component of peroxisomal membrane7.19E-03
23GO:0030665: clathrin-coated vesicle membrane9.17E-03
24GO:0046658: anchored component of plasma membrane1.44E-02
25GO:0031225: anchored component of membrane1.56E-02
26GO:0005829: cytosol1.56E-02
27GO:0005768: endosome2.04E-02
28GO:0005741: mitochondrial outer membrane2.15E-02
29GO:0005744: mitochondrial inner membrane presequence translocase complex2.59E-02
30GO:0009706: chloroplast inner membrane2.63E-02
31GO:0005777: peroxisome2.96E-02
32GO:0005886: plasma membrane3.19E-02
33GO:0019898: extrinsic component of membrane3.39E-02
34GO:0009504: cell plate3.39E-02
35GO:0000785: chromatin3.72E-02
36GO:0032580: Golgi cisterna membrane4.07E-02
37GO:0005778: peroxisomal membrane4.25E-02
38GO:0005788: endoplasmic reticulum lumen4.80E-02
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Gene type



Gene DE type