GO Enrichment Analysis of Co-expressed Genes with
AT5G24314
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009069: serine family amino acid metabolic process | 0.00E+00 |
| 2 | GO:1905421: regulation of plant organ morphogenesis | 0.00E+00 |
| 3 | GO:0030155: regulation of cell adhesion | 0.00E+00 |
| 4 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 5 | GO:0070178: D-serine metabolic process | 0.00E+00 |
| 6 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 7 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 8 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 9 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 10 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 11 | GO:0017038: protein import | 0.00E+00 |
| 12 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 13 | GO:1904966: positive regulation of vitamin E biosynthetic process | 0.00E+00 |
| 14 | GO:1904964: positive regulation of phytol biosynthetic process | 0.00E+00 |
| 15 | GO:0015979: photosynthesis | 4.80E-10 |
| 16 | GO:0032544: plastid translation | 8.30E-08 |
| 17 | GO:0015995: chlorophyll biosynthetic process | 2.42E-06 |
| 18 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.02E-06 |
| 19 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.46E-05 |
| 20 | GO:0010190: cytochrome b6f complex assembly | 1.04E-04 |
| 21 | GO:0009735: response to cytokinin | 1.48E-04 |
| 22 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 2.55E-04 |
| 23 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.55E-04 |
| 24 | GO:0019544: arginine catabolic process to glutamate | 2.55E-04 |
| 25 | GO:0006659: phosphatidylserine biosynthetic process | 2.55E-04 |
| 26 | GO:0042371: vitamin K biosynthetic process | 2.55E-04 |
| 27 | GO:0010027: thylakoid membrane organization | 4.65E-04 |
| 28 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 5.64E-04 |
| 29 | GO:0018026: peptidyl-lysine monomethylation | 5.64E-04 |
| 30 | GO:0009773: photosynthetic electron transport in photosystem I | 5.68E-04 |
| 31 | GO:0019684: photosynthesis, light reaction | 5.68E-04 |
| 32 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.51E-04 |
| 33 | GO:0006412: translation | 8.04E-04 |
| 34 | GO:0010207: photosystem II assembly | 8.30E-04 |
| 35 | GO:0048281: inflorescence morphogenesis | 9.15E-04 |
| 36 | GO:0006954: inflammatory response | 9.15E-04 |
| 37 | GO:0006166: purine ribonucleoside salvage | 1.31E-03 |
| 38 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.31E-03 |
| 39 | GO:0010148: transpiration | 1.31E-03 |
| 40 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.31E-03 |
| 41 | GO:0010731: protein glutathionylation | 1.31E-03 |
| 42 | GO:0006168: adenine salvage | 1.31E-03 |
| 43 | GO:0006986: response to unfolded protein | 1.31E-03 |
| 44 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 1.31E-03 |
| 45 | GO:0010109: regulation of photosynthesis | 1.75E-03 |
| 46 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.75E-03 |
| 47 | GO:0009765: photosynthesis, light harvesting | 1.75E-03 |
| 48 | GO:0006109: regulation of carbohydrate metabolic process | 1.75E-03 |
| 49 | GO:0010107: potassium ion import | 1.75E-03 |
| 50 | GO:0006546: glycine catabolic process | 1.75E-03 |
| 51 | GO:0006021: inositol biosynthetic process | 1.75E-03 |
| 52 | GO:0044209: AMP salvage | 2.23E-03 |
| 53 | GO:0006465: signal peptide processing | 2.23E-03 |
| 54 | GO:0016120: carotene biosynthetic process | 2.23E-03 |
| 55 | GO:0000304: response to singlet oxygen | 2.23E-03 |
| 56 | GO:0098719: sodium ion import across plasma membrane | 2.23E-03 |
| 57 | GO:0006564: L-serine biosynthetic process | 2.23E-03 |
| 58 | GO:0006751: glutathione catabolic process | 2.75E-03 |
| 59 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.75E-03 |
| 60 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 2.75E-03 |
| 61 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.75E-03 |
| 62 | GO:0000741: karyogamy | 2.75E-03 |
| 63 | GO:0006563: L-serine metabolic process | 2.75E-03 |
| 64 | GO:0009955: adaxial/abaxial pattern specification | 3.30E-03 |
| 65 | GO:1901259: chloroplast rRNA processing | 3.30E-03 |
| 66 | GO:0009772: photosynthetic electron transport in photosystem II | 3.89E-03 |
| 67 | GO:0070370: cellular heat acclimation | 3.89E-03 |
| 68 | GO:0010103: stomatal complex morphogenesis | 3.89E-03 |
| 69 | GO:0007155: cell adhesion | 4.52E-03 |
| 70 | GO:0048564: photosystem I assembly | 4.52E-03 |
| 71 | GO:0006605: protein targeting | 4.52E-03 |
| 72 | GO:0055075: potassium ion homeostasis | 4.52E-03 |
| 73 | GO:0017004: cytochrome complex assembly | 5.18E-03 |
| 74 | GO:0071482: cellular response to light stimulus | 5.18E-03 |
| 75 | GO:0009817: defense response to fungus, incompatible interaction | 5.18E-03 |
| 76 | GO:0001558: regulation of cell growth | 5.18E-03 |
| 77 | GO:0018298: protein-chromophore linkage | 5.18E-03 |
| 78 | GO:0009813: flavonoid biosynthetic process | 5.44E-03 |
| 79 | GO:0090333: regulation of stomatal closure | 5.86E-03 |
| 80 | GO:0046916: cellular transition metal ion homeostasis | 5.86E-03 |
| 81 | GO:0009853: photorespiration | 6.56E-03 |
| 82 | GO:0051453: regulation of intracellular pH | 6.58E-03 |
| 83 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.58E-03 |
| 84 | GO:0006810: transport | 6.92E-03 |
| 85 | GO:0009641: shade avoidance | 7.33E-03 |
| 86 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.33E-03 |
| 87 | GO:0045036: protein targeting to chloroplast | 7.33E-03 |
| 88 | GO:0030001: metal ion transport | 7.48E-03 |
| 89 | GO:0006415: translational termination | 8.11E-03 |
| 90 | GO:0009089: lysine biosynthetic process via diaminopimelate | 8.11E-03 |
| 91 | GO:0043085: positive regulation of catalytic activity | 8.11E-03 |
| 92 | GO:0005983: starch catabolic process | 8.92E-03 |
| 93 | GO:0009658: chloroplast organization | 9.58E-03 |
| 94 | GO:0009767: photosynthetic electron transport chain | 9.75E-03 |
| 95 | GO:0042254: ribosome biogenesis | 9.81E-03 |
| 96 | GO:0010143: cutin biosynthetic process | 1.06E-02 |
| 97 | GO:0019853: L-ascorbic acid biosynthetic process | 1.15E-02 |
| 98 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.34E-02 |
| 99 | GO:0051302: regulation of cell division | 1.43E-02 |
| 100 | GO:0006418: tRNA aminoacylation for protein translation | 1.43E-02 |
| 101 | GO:0019915: lipid storage | 1.53E-02 |
| 102 | GO:0031408: oxylipin biosynthetic process | 1.53E-02 |
| 103 | GO:0030245: cellulose catabolic process | 1.64E-02 |
| 104 | GO:0006730: one-carbon metabolic process | 1.64E-02 |
| 105 | GO:0016226: iron-sulfur cluster assembly | 1.64E-02 |
| 106 | GO:0055114: oxidation-reduction process | 1.68E-02 |
| 107 | GO:0009742: brassinosteroid mediated signaling pathway | 1.73E-02 |
| 108 | GO:0006012: galactose metabolic process | 1.74E-02 |
| 109 | GO:0009686: gibberellin biosynthetic process | 1.74E-02 |
| 110 | GO:0001944: vasculature development | 1.74E-02 |
| 111 | GO:0009561: megagametogenesis | 1.85E-02 |
| 112 | GO:0009306: protein secretion | 1.85E-02 |
| 113 | GO:0016117: carotenoid biosynthetic process | 1.95E-02 |
| 114 | GO:0000413: protein peptidyl-prolyl isomerization | 2.07E-02 |
| 115 | GO:0010268: brassinosteroid homeostasis | 2.18E-02 |
| 116 | GO:0006885: regulation of pH | 2.18E-02 |
| 117 | GO:0006662: glycerol ether metabolic process | 2.18E-02 |
| 118 | GO:0010197: polar nucleus fusion | 2.18E-02 |
| 119 | GO:0009646: response to absence of light | 2.29E-02 |
| 120 | GO:0048544: recognition of pollen | 2.29E-02 |
| 121 | GO:0015986: ATP synthesis coupled proton transport | 2.29E-02 |
| 122 | GO:0006814: sodium ion transport | 2.29E-02 |
| 123 | GO:0009791: post-embryonic development | 2.41E-02 |
| 124 | GO:0008654: phospholipid biosynthetic process | 2.41E-02 |
| 125 | GO:0016132: brassinosteroid biosynthetic process | 2.53E-02 |
| 126 | GO:0006413: translational initiation | 2.64E-02 |
| 127 | GO:0032502: developmental process | 2.65E-02 |
| 128 | GO:0040008: regulation of growth | 2.70E-02 |
| 129 | GO:0010090: trichome morphogenesis | 2.78E-02 |
| 130 | GO:0016125: sterol metabolic process | 2.90E-02 |
| 131 | GO:0048481: plant ovule development | 3.97E-02 |
| 132 | GO:0016051: carbohydrate biosynthetic process | 4.70E-02 |
| 133 | GO:0034599: cellular response to oxidative stress | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 2 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 5 | GO:0030378: serine racemase activity | 0.00E+00 |
| 6 | GO:0003941: L-serine ammonia-lyase activity | 0.00E+00 |
| 7 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 8 | GO:0008721: D-serine ammonia-lyase activity | 0.00E+00 |
| 9 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 10 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 11 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 12 | GO:0019843: rRNA binding | 4.48E-07 |
| 13 | GO:0005528: FK506 binding | 2.38E-06 |
| 14 | GO:0004033: aldo-keto reductase (NADP) activity | 5.29E-06 |
| 15 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.65E-05 |
| 16 | GO:0016851: magnesium chelatase activity | 2.46E-05 |
| 17 | GO:0003735: structural constituent of ribosome | 2.80E-05 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.46E-05 |
| 19 | GO:0043495: protein anchor | 4.46E-05 |
| 20 | GO:0045430: chalcone isomerase activity | 4.46E-05 |
| 21 | GO:0019899: enzyme binding | 1.88E-04 |
| 22 | GO:0050308: sugar-phosphatase activity | 2.55E-04 |
| 23 | GO:0051777: ent-kaurenoate oxidase activity | 2.55E-04 |
| 24 | GO:0004856: xylulokinase activity | 2.55E-04 |
| 25 | GO:0019203: carbohydrate phosphatase activity | 2.55E-04 |
| 26 | GO:0005080: protein kinase C binding | 2.55E-04 |
| 27 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.55E-04 |
| 28 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.64E-04 |
| 29 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 5.64E-04 |
| 30 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.64E-04 |
| 31 | GO:0004047: aminomethyltransferase activity | 5.64E-04 |
| 32 | GO:0004512: inositol-3-phosphate synthase activity | 5.64E-04 |
| 33 | GO:0016630: protochlorophyllide reductase activity | 5.64E-04 |
| 34 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.64E-04 |
| 35 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 5.64E-04 |
| 36 | GO:0031072: heat shock protein binding | 7.37E-04 |
| 37 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 9.15E-04 |
| 38 | GO:0002161: aminoacyl-tRNA editing activity | 9.15E-04 |
| 39 | GO:0005504: fatty acid binding | 9.15E-04 |
| 40 | GO:0004751: ribose-5-phosphate isomerase activity | 9.15E-04 |
| 41 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 9.15E-04 |
| 42 | GO:0070402: NADPH binding | 9.15E-04 |
| 43 | GO:0008097: 5S rRNA binding | 1.31E-03 |
| 44 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.31E-03 |
| 45 | GO:0003999: adenine phosphoribosyltransferase activity | 1.31E-03 |
| 46 | GO:0016149: translation release factor activity, codon specific | 1.31E-03 |
| 47 | GO:0042802: identical protein binding | 1.46E-03 |
| 48 | GO:0022891: substrate-specific transmembrane transporter activity | 1.63E-03 |
| 49 | GO:0008453: alanine-glyoxylate transaminase activity | 1.75E-03 |
| 50 | GO:0019199: transmembrane receptor protein kinase activity | 1.75E-03 |
| 51 | GO:0042277: peptide binding | 1.75E-03 |
| 52 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.75E-03 |
| 53 | GO:0016279: protein-lysine N-methyltransferase activity | 1.75E-03 |
| 54 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.23E-03 |
| 55 | GO:0003959: NADPH dehydrogenase activity | 2.23E-03 |
| 56 | GO:0051082: unfolded protein binding | 2.74E-03 |
| 57 | GO:2001070: starch binding | 2.75E-03 |
| 58 | GO:0048038: quinone binding | 2.75E-03 |
| 59 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.75E-03 |
| 60 | GO:0004462: lactoylglutathione lyase activity | 2.75E-03 |
| 61 | GO:0015081: sodium ion transmembrane transporter activity | 2.75E-03 |
| 62 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.75E-03 |
| 63 | GO:0005509: calcium ion binding | 2.77E-03 |
| 64 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.30E-03 |
| 65 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.30E-03 |
| 66 | GO:0016168: chlorophyll binding | 4.20E-03 |
| 67 | GO:0046914: transition metal ion binding | 5.18E-03 |
| 68 | GO:0009055: electron carrier activity | 5.53E-03 |
| 69 | GO:0003747: translation release factor activity | 5.86E-03 |
| 70 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 5.86E-03 |
| 71 | GO:0008047: enzyme activator activity | 7.33E-03 |
| 72 | GO:0015020: glucuronosyltransferase activity | 7.33E-03 |
| 73 | GO:0015386: potassium:proton antiporter activity | 8.11E-03 |
| 74 | GO:0008378: galactosyltransferase activity | 8.92E-03 |
| 75 | GO:0000049: tRNA binding | 8.92E-03 |
| 76 | GO:0035091: phosphatidylinositol binding | 9.16E-03 |
| 77 | GO:0008266: poly(U) RNA binding | 1.06E-02 |
| 78 | GO:0051536: iron-sulfur cluster binding | 1.34E-02 |
| 79 | GO:0004857: enzyme inhibitor activity | 1.34E-02 |
| 80 | GO:0051087: chaperone binding | 1.43E-02 |
| 81 | GO:0043424: protein histidine kinase binding | 1.43E-02 |
| 82 | GO:0016746: transferase activity, transferring acyl groups | 1.68E-02 |
| 83 | GO:0008810: cellulase activity | 1.74E-02 |
| 84 | GO:0004812: aminoacyl-tRNA ligase activity | 1.95E-02 |
| 85 | GO:0047134: protein-disulfide reductase activity | 1.95E-02 |
| 86 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.18E-02 |
| 87 | GO:0030170: pyridoxal phosphate binding | 2.27E-02 |
| 88 | GO:0004791: thioredoxin-disulfide reductase activity | 2.29E-02 |
| 89 | GO:0015385: sodium:proton antiporter activity | 2.78E-02 |
| 90 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.78E-02 |
| 91 | GO:0046872: metal ion binding | 2.90E-02 |
| 92 | GO:0016791: phosphatase activity | 2.90E-02 |
| 93 | GO:0008483: transaminase activity | 3.03E-02 |
| 94 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.03E-02 |
| 95 | GO:0016597: amino acid binding | 3.16E-02 |
| 96 | GO:0003743: translation initiation factor activity | 3.30E-02 |
| 97 | GO:0008375: acetylglucosaminyltransferase activity | 3.56E-02 |
| 98 | GO:0004721: phosphoprotein phosphatase activity | 3.70E-02 |
| 99 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.97E-02 |
| 100 | GO:0015238: drug transmembrane transporter activity | 4.12E-02 |
| 101 | GO:0008168: methyltransferase activity | 4.20E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.54E-50 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.55E-31 |
| 4 | GO:0009570: chloroplast stroma | 4.32E-27 |
| 5 | GO:0009579: thylakoid | 1.23E-22 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 2.03E-17 |
| 7 | GO:0009941: chloroplast envelope | 4.66E-16 |
| 8 | GO:0009534: chloroplast thylakoid | 7.02E-16 |
| 9 | GO:0031977: thylakoid lumen | 4.05E-15 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 8.13E-10 |
| 11 | GO:0005840: ribosome | 1.89E-07 |
| 12 | GO:0019898: extrinsic component of membrane | 4.67E-07 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.07E-05 |
| 14 | GO:0010007: magnesium chelatase complex | 1.09E-05 |
| 15 | GO:0031969: chloroplast membrane | 1.00E-04 |
| 16 | GO:0009547: plastid ribosome | 2.55E-04 |
| 17 | GO:0005787: signal peptidase complex | 2.55E-04 |
| 18 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.55E-04 |
| 19 | GO:0030095: chloroplast photosystem II | 8.30E-04 |
| 20 | GO:0033281: TAT protein transport complex | 9.15E-04 |
| 21 | GO:0042651: thylakoid membrane | 1.25E-03 |
| 22 | GO:0005960: glycine cleavage complex | 1.31E-03 |
| 23 | GO:0016020: membrane | 2.42E-03 |
| 24 | GO:0009523: photosystem II | 2.57E-03 |
| 25 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.75E-03 |
| 26 | GO:0010319: stromule | 3.54E-03 |
| 27 | GO:0009533: chloroplast stromal thylakoid | 3.89E-03 |
| 28 | GO:0009539: photosystem II reaction center | 5.18E-03 |
| 29 | GO:0005763: mitochondrial small ribosomal subunit | 5.86E-03 |
| 30 | GO:0016021: integral component of membrane | 7.36E-03 |
| 31 | GO:0000311: plastid large ribosomal subunit | 8.92E-03 |
| 32 | GO:0000312: plastid small ribosomal subunit | 1.06E-02 |
| 33 | GO:0043234: protein complex | 1.24E-02 |
| 34 | GO:0009536: plastid | 1.53E-02 |
| 35 | GO:0010287: plastoglobule | 1.94E-02 |
| 36 | GO:0009522: photosystem I | 2.29E-02 |
| 37 | GO:0046658: anchored component of plasma membrane | 3.74E-02 |
| 38 | GO:0009707: chloroplast outer membrane | 3.97E-02 |
| 39 | GO:0015934: large ribosomal subunit | 4.41E-02 |