co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G22350

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046865: terpenoid transport	0.00E+00
2	GO:2000636: positive regulation of primary miRNA processing	0.00E+00
3	GO:0010324: membrane invagination	0.00E+00
4	GO:0010055: atrichoblast differentiation	0.00E+00
5	GO:0090480: purine nucleotide-sugar transmembrane transport	0.00E+00
6	GO:1902001: fatty acid transmembrane transport	0.00E+00
7	GO:2000630: positive regulation of miRNA metabolic process	0.00E+00
8	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
9	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
10	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
11	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
12	GO:0009312: oligosaccharide biosynthetic process	0.00E+00
13	GO:0071456: cellular response to hypoxia	6.77E-07
14	GO:0009737: response to abscisic acid	1.03E-05
15	GO:0009751: response to salicylic acid	4.95E-05
16	GO:0051707: response to other organism	6.02E-05
17	GO:0010200: response to chitin	1.09E-04
18	GO:0009643: photosynthetic acclimation	2.25E-04
19	GO:0009753: response to jasmonic acid	3.19E-04
20	GO:0050691: regulation of defense response to virus by host	4.15E-04
21	GO:0032491: detection of molecule of fungal origin	4.15E-04
22	GO:1990542: mitochondrial transmembrane transport	4.15E-04
23	GO:0032107: regulation of response to nutrient levels	4.15E-04
24	GO:0048508: embryonic meristem development	4.15E-04
25	GO:0015760: glucose-6-phosphate transport	4.15E-04
26	GO:0015969: guanosine tetraphosphate metabolic process	4.15E-04
27	GO:0033306: phytol metabolic process	4.15E-04
28	GO:0042742: defense response to bacterium	5.08E-04
29	GO:0010204: defense response signaling pathway, resistance gene-independent	5.98E-04
30	GO:0010112: regulation of systemic acquired resistance	7.15E-04
31	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.44E-04
32	GO:0015712: hexose phosphate transport	8.99E-04
33	GO:0051258: protein polymerization	8.99E-04
34	GO:0015012: heparan sulfate proteoglycan biosynthetic process	8.99E-04
35	GO:0071668: plant-type cell wall assembly	8.99E-04
36	GO:0009446: putrescine biosynthetic process	8.99E-04
37	GO:0080183: response to photooxidative stress	8.99E-04
38	GO:0010155: regulation of proton transport	8.99E-04
39	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	8.99E-04
40	GO:0006527: arginine catabolic process	8.99E-04
41	GO:0080181: lateral root branching	8.99E-04
42	GO:0006024: glycosaminoglycan biosynthetic process	8.99E-04
43	GO:0055088: lipid homeostasis	8.99E-04
44	GO:0010115: regulation of abscisic acid biosynthetic process	8.99E-04
45	GO:0015908: fatty acid transport	8.99E-04
46	GO:0002240: response to molecule of oomycetes origin	8.99E-04
47	GO:0015865: purine nucleotide transport	8.99E-04
48	GO:0044419: interspecies interaction between organisms	8.99E-04
49	GO:0009945: radial axis specification	8.99E-04
50	GO:0010271: regulation of chlorophyll catabolic process	8.99E-04
51	GO:0043328: protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	1.46E-03
52	GO:0080163: regulation of protein serine/threonine phosphatase activity	1.46E-03
53	GO:0035436: triose phosphate transmembrane transport	1.46E-03
54	GO:0015783: GDP-fucose transport	1.46E-03
55	GO:0015692: lead ion transport	1.46E-03
56	GO:0031022: nuclear migration along microfilament	1.46E-03
57	GO:0015695: organic cation transport	1.46E-03
58	GO:0015714: phosphoenolpyruvate transport	1.46E-03
59	GO:0080168: abscisic acid transport	1.46E-03
60	GO:0006954: inflammatory response	1.46E-03
61	GO:0010498: proteasomal protein catabolic process	1.46E-03
62	GO:0034051: negative regulation of plant-type hypersensitive response	1.46E-03
63	GO:0006979: response to oxidative stress	1.59E-03
64	GO:0002237: response to molecule of bacterial origin	1.65E-03
65	GO:0080167: response to karrikin	2.06E-03
66	GO:0071323: cellular response to chitin	2.11E-03
67	GO:0080024: indolebutyric acid metabolic process	2.11E-03
68	GO:0010116: positive regulation of abscisic acid biosynthetic process	2.11E-03
69	GO:0046902: regulation of mitochondrial membrane permeability	2.11E-03
70	GO:0010731: protein glutathionylation	2.11E-03
71	GO:0015696: ammonium transport	2.11E-03
72	GO:0009863: salicylic acid mediated signaling pathway	2.29E-03
73	GO:0006897: endocytosis	2.69E-03
74	GO:0008295: spermidine biosynthetic process	2.84E-03
75	GO:0015867: ATP transport	2.84E-03
76	GO:0009902: chloroplast relocation	2.84E-03
77	GO:0010109: regulation of photosynthesis	2.84E-03
78	GO:0060548: negative regulation of cell death	2.84E-03
79	GO:0045227: capsule polysaccharide biosynthetic process	2.84E-03
80	GO:0072488: ammonium transmembrane transport	2.84E-03
81	GO:0033358: UDP-L-arabinose biosynthetic process	2.84E-03
82	GO:0015713: phosphoglycerate transport	2.84E-03
83	GO:0031348: negative regulation of defense response	3.04E-03
84	GO:0010150: leaf senescence	3.05E-03
85	GO:0009738: abscisic acid-activated signaling pathway	3.17E-03
86	GO:0006012: galactose metabolic process	3.32E-03
87	GO:0009636: response to toxic substance	3.46E-03
88	GO:0009611: response to wounding	3.54E-03
89	GO:0006952: defense response	3.60E-03
90	GO:0009306: protein secretion	3.61E-03
91	GO:0009229: thiamine diphosphate biosynthetic process	3.63E-03
92	GO:0009435: NAD biosynthetic process	3.63E-03
93	GO:0018344: protein geranylgeranylation	3.63E-03
94	GO:0034052: positive regulation of plant-type hypersensitive response	3.63E-03
95	GO:0007166: cell surface receptor signaling pathway	3.75E-03
96	GO:0006470: protein dephosphorylation	3.75E-03
97	GO:0031347: regulation of defense response	3.81E-03
98	GO:0042391: regulation of membrane potential	4.23E-03
99	GO:0009228: thiamine biosynthetic process	4.49E-03
100	GO:0002238: response to molecule of fungal origin	4.49E-03
101	GO:0009759: indole glucosinolate biosynthetic process	4.49E-03
102	GO:0015866: ADP transport	4.49E-03
103	GO:0010256: endomembrane system organization	4.49E-03
104	GO:0006596: polyamine biosynthetic process	4.49E-03
105	GO:0009942: longitudinal axis specification	5.42E-03
106	GO:0045926: negative regulation of growth	5.42E-03
107	GO:0010193: response to ozone	5.63E-03
108	GO:1902074: response to salt	6.41E-03
109	GO:0010044: response to aluminum ion	6.41E-03
110	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	6.41E-03
111	GO:0046470: phosphatidylcholine metabolic process	6.41E-03
112	GO:0043090: amino acid import	6.41E-03
113	GO:0071446: cellular response to salicylic acid stimulus	6.41E-03
114	GO:1900056: negative regulation of leaf senescence	6.41E-03
115	GO:1900057: positive regulation of leaf senescence	6.41E-03
116	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.41E-03
117	GO:0031540: regulation of anthocyanin biosynthetic process	7.45E-03
118	GO:0009787: regulation of abscisic acid-activated signaling pathway	7.45E-03
119	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	7.45E-03
120	GO:0009819: drought recovery	7.45E-03
121	GO:0009850: auxin metabolic process	7.45E-03
122	GO:0043068: positive regulation of programmed cell death	7.45E-03
123	GO:0015031: protein transport	7.82E-03
124	GO:0050832: defense response to fungus	8.35E-03
125	GO:2000031: regulation of salicylic acid mediated signaling pathway	8.55E-03
126	GO:0010208: pollen wall assembly	8.55E-03
127	GO:0010120: camalexin biosynthetic process	8.55E-03
128	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	8.64E-03
129	GO:0010029: regulation of seed germination	8.64E-03
130	GO:0015780: nucleotide-sugar transport	9.71E-03
131	GO:0007338: single fertilization	9.71E-03
132	GO:0019432: triglyceride biosynthetic process	9.71E-03
133	GO:0006468: protein phosphorylation	9.79E-03
134	GO:0008202: steroid metabolic process	1.09E-02
135	GO:0009086: methionine biosynthetic process	1.09E-02
136	GO:0048268: clathrin coat assembly	1.09E-02
137	GO:0010380: regulation of chlorophyll biosynthetic process	1.09E-02
138	GO:0009407: toxin catabolic process	1.18E-02
139	GO:0006032: chitin catabolic process	1.22E-02
140	GO:0010629: negative regulation of gene expression	1.22E-02
141	GO:0051555: flavonol biosynthetic process	1.22E-02
142	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.22E-02
143	GO:0010119: regulation of stomatal movement	1.24E-02
144	GO:0009414: response to water deprivation	1.28E-02
145	GO:0009684: indoleacetic acid biosynthetic process	1.35E-02
146	GO:0019684: photosynthesis, light reaction	1.35E-02
147	GO:0009089: lysine biosynthetic process via diaminopimelate	1.35E-02
148	GO:0009867: jasmonic acid mediated signaling pathway	1.36E-02
149	GO:0045037: protein import into chloroplast stroma	1.49E-02
150	GO:0009408: response to heat	1.49E-02
151	GO:0006839: mitochondrial transport	1.55E-02
152	GO:0018107: peptidyl-threonine phosphorylation	1.63E-02
153	GO:0055046: microgametogenesis	1.63E-02
154	GO:0006829: zinc II ion transport	1.63E-02
155	GO:0010102: lateral root morphogenesis	1.63E-02
156	GO:0055085: transmembrane transport	1.68E-02
157	GO:0009617: response to bacterium	1.73E-02
158	GO:0034605: cellular response to heat	1.77E-02
159	GO:0090351: seedling development	1.92E-02
160	GO:0009225: nucleotide-sugar metabolic process	1.92E-02
161	GO:0080188: RNA-directed DNA methylation	1.92E-02
162	GO:0046688: response to copper ion	1.92E-02
163	GO:0006855: drug transmembrane transport	2.05E-02
164	GO:0000162: tryptophan biosynthetic process	2.08E-02
165	GO:0006351: transcription, DNA-templated	2.13E-02
166	GO:0006812: cation transport	2.21E-02
167	GO:0042538: hyperosmotic salinity response	2.21E-02
168	GO:2000377: regulation of reactive oxygen species metabolic process	2.24E-02
169	GO:0080147: root hair cell development	2.24E-02
170	GO:0006486: protein glycosylation	2.37E-02
171	GO:0009409: response to cold	2.39E-02
172	GO:0006825: copper ion transport	2.40E-02
173	GO:0016998: cell wall macromolecule catabolic process	2.57E-02
174	GO:0006970: response to osmotic stress	2.63E-02
175	GO:0016226: iron-sulfur cluster assembly	2.74E-02
176	GO:0006810: transport	2.78E-02
177	GO:0009723: response to ethylene	2.87E-02
178	GO:0009626: plant-type hypersensitive response	2.98E-02
179	GO:0009620: response to fungus	3.08E-02
180	GO:0009561: megagametogenesis	3.09E-02
181	GO:0009624: response to nematode	3.37E-02
182	GO:0000271: polysaccharide biosynthetic process	3.46E-02
183	GO:0000413: protein peptidyl-prolyl isomerization	3.46E-02
184	GO:0018105: peptidyl-serine phosphorylation	3.47E-02
185	GO:0006885: regulation of pH	3.65E-02
186	GO:0045489: pectin biosynthetic process	3.65E-02
187	GO:0006520: cellular amino acid metabolic process	3.65E-02
188	GO:0000398: mRNA splicing, via spliceosome	3.88E-02
189	GO:0045892: negative regulation of transcription, DNA-templated	3.99E-02
190	GO:0009749: response to glucose	4.04E-02
191	GO:0006635: fatty acid beta-oxidation	4.24E-02
192	GO:0071554: cell wall organization or biogenesis	4.24E-02
193	GO:0002229: defense response to oomycetes	4.24E-02
194	GO:0019761: glucosinolate biosynthetic process	4.44E-02
195	GO:0009845: seed germination	4.55E-02
196	GO:0009567: double fertilization forming a zygote and endosperm	4.86E-02
197	GO:0006464: cellular protein modification process	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0005212: structural constituent of eye lens	0.00E+00
2	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
3	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
4	GO:0055105: ubiquitin-protein transferase inhibitor activity	0.00E+00
5	GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.00E+00
6	GO:0008734: L-aspartate oxidase activity	0.00E+00
7	GO:0050334: thiaminase activity	0.00E+00
8	GO:0043565: sequence-specific DNA binding	1.88E-04
9	GO:0003978: UDP-glucose 4-epimerase activity	3.03E-04
10	GO:2001147: camalexin binding	4.15E-04
11	GO:0008792: arginine decarboxylase activity	4.15E-04
12	GO:0015245: fatty acid transporter activity	4.15E-04
13	GO:0010285: L,L-diaminopimelate aminotransferase activity	4.15E-04
14	GO:2001227: quercitrin binding	4.15E-04
15	GO:0004662: CAAX-protein geranylgeranyltransferase activity	4.15E-04
16	GO:0047150: betaine-homocysteine S-methyltransferase activity	4.15E-04
17	GO:0015036: disulfide oxidoreductase activity	8.99E-04
18	GO:0048531: beta-1,3-galactosyltransferase activity	8.99E-04
19	GO:0008728: GTP diphosphokinase activity	8.99E-04
20	GO:0047364: desulfoglucosinolate sulfotransferase activity	8.99E-04
21	GO:0015152: glucose-6-phosphate transmembrane transporter activity	8.99E-04
22	GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity	8.99E-04
23	GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity	8.99E-04
24	GO:0032934: sterol binding	8.99E-04
25	GO:0050736: O-malonyltransferase activity	8.99E-04
26	GO:0005509: calcium ion binding	1.28E-03
27	GO:0008375: acetylglucosaminyltransferase activity	1.31E-03
28	GO:0030247: polysaccharide binding	1.40E-03
29	GO:0032403: protein complex binding	1.46E-03
30	GO:0071917: triose-phosphate transmembrane transporter activity	1.46E-03
31	GO:0005457: GDP-fucose transmembrane transporter activity	1.46E-03
32	GO:0004838: L-tyrosine:2-oxoglutarate aminotransferase activity	1.46E-03
33	GO:0016531: copper chaperone activity	1.46E-03
34	GO:0016301: kinase activity	1.80E-03
35	GO:0030552: cAMP binding	1.85E-03
36	GO:0030553: cGMP binding	1.85E-03
37	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.11E-03
38	GO:0017077: oxidative phosphorylation uncoupler activity	2.11E-03
39	GO:0035529: NADH pyrophosphatase activity	2.11E-03
40	GO:0001046: core promoter sequence-specific DNA binding	2.29E-03
41	GO:0005216: ion channel activity	2.53E-03
42	GO:0015120: phosphoglycerate transmembrane transporter activity	2.84E-03
43	GO:0050373: UDP-arabinose 4-epimerase activity	2.84E-03
44	GO:0004834: tryptophan synthase activity	2.84E-03
45	GO:0015297: antiporter activity	2.84E-03
46	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.61E-03
47	GO:0005496: steroid binding	3.63E-03
48	GO:0047631: ADP-ribose diphosphatase activity	3.63E-03
49	GO:0005471: ATP:ADP antiporter activity	3.63E-03
50	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.63E-03
51	GO:0005249: voltage-gated potassium channel activity	4.23E-03
52	GO:0030551: cyclic nucleotide binding	4.23E-03
53	GO:0008519: ammonium transmembrane transporter activity	4.49E-03
54	GO:0000210: NAD+ diphosphatase activity	4.49E-03
55	GO:0004144: diacylglycerol O-acyltransferase activity	5.42E-03
56	GO:0005347: ATP transmembrane transporter activity	5.42E-03
57	GO:0004656: procollagen-proline 4-dioxygenase activity	5.42E-03
58	GO:0015217: ADP transmembrane transporter activity	5.42E-03
59	GO:0102391: decanoate--CoA ligase activity	5.42E-03
60	GO:0043295: glutathione binding	6.41E-03
61	GO:0004467: long-chain fatty acid-CoA ligase activity	6.41E-03
62	GO:0003700: transcription factor activity, sequence-specific DNA binding	6.60E-03
63	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	7.26E-03
64	GO:0008483: transaminase activity	7.26E-03
65	GO:0004033: aldo-keto reductase (NADP) activity	7.45E-03
66	GO:0004714: transmembrane receptor protein tyrosine kinase activity	7.45E-03
67	GO:0047893: flavonol 3-O-glucosyltransferase activity	7.45E-03
68	GO:0005516: calmodulin binding	7.56E-03
69	GO:0008142: oxysterol binding	8.55E-03
70	GO:0004630: phospholipase D activity	8.55E-03
71	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	8.55E-03
72	GO:0016758: transferase activity, transferring hexosyl groups	8.83E-03
73	GO:0016757: transferase activity, transferring glycosyl groups	1.17E-02
74	GO:0004568: chitinase activity	1.22E-02
75	GO:0005545: 1-phosphatidylinositol binding	1.22E-02
76	GO:0015020: glucuronosyltransferase activity	1.22E-02
77	GO:0004864: protein phosphatase inhibitor activity	1.22E-02
78	GO:0004722: protein serine/threonine phosphatase activity	1.25E-02
79	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.26E-02
80	GO:0008559: xenobiotic-transporting ATPase activity	1.35E-02
81	GO:0050661: NADP binding	1.55E-02
82	GO:0016740: transferase activity	1.57E-02
83	GO:0008194: UDP-glycosyltransferase activity	1.59E-02
84	GO:0005315: inorganic phosphate transmembrane transporter activity	1.63E-02
85	GO:0004364: glutathione transferase activity	1.68E-02
86	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.87E-02
87	GO:0008061: chitin binding	1.92E-02
88	GO:0003712: transcription cofactor activity	1.92E-02
89	GO:0008146: sulfotransferase activity	1.92E-02
90	GO:0051536: iron-sulfur cluster binding	2.24E-02
91	GO:0031418: L-ascorbic acid binding	2.24E-02
92	GO:0008324: cation transmembrane transporter activity	2.40E-02
93	GO:0033612: receptor serine/threonine kinase binding	2.57E-02
94	GO:0035251: UDP-glucosyltransferase activity	2.57E-02
95	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.74E-02
96	GO:0004674: protein serine/threonine kinase activity	2.85E-02
97	GO:0008810: cellulase activity	2.91E-02
98	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.08E-02
99	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.08E-02
100	GO:0016874: ligase activity	3.17E-02
101	GO:0005451: monovalent cation:proton antiporter activity	3.46E-02
102	GO:0015035: protein disulfide oxidoreductase activity	3.47E-02
103	GO:0046873: metal ion transmembrane transporter activity	3.65E-02
104	GO:0030276: clathrin binding	3.65E-02
105	GO:0015299: solute:proton antiporter activity	3.85E-02
106	GO:0019901: protein kinase binding	4.04E-02
107	GO:0005524: ATP binding	4.10E-02
108	GO:0004197: cysteine-type endopeptidase activity	4.44E-02
109	GO:0015385: sodium:proton antiporter activity	4.65E-02
110	GO:0030170: pyridoxal phosphate binding	4.67E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	1.36E-09
2	GO:0005886: plasma membrane	3.09E-05
3	GO:0005794: Golgi apparatus	4.17E-05
4	GO:0005953: CAAX-protein geranylgeranyltransferase complex	4.15E-04
5	GO:0005901: caveola	8.99E-04
6	GO:0031314: extrinsic component of mitochondrial inner membrane	8.99E-04
7	GO:0008287: protein serine/threonine phosphatase complex	1.46E-03
8	GO:0030658: transport vesicle membrane	2.11E-03
9	GO:0005743: mitochondrial inner membrane	3.60E-03
10	GO:0000813: ESCRT I complex	3.63E-03
11	GO:0000164: protein phosphatase type 1 complex	3.63E-03
12	GO:0005774: vacuolar membrane	5.13E-03
13	GO:0005779: integral component of peroxisomal membrane	8.55E-03
14	GO:0015030: Cajal body	1.09E-02
15	GO:0005740: mitochondrial envelope	1.22E-02
16	GO:0000325: plant-type vacuole	1.24E-02
17	GO:0005795: Golgi stack	1.92E-02
18	GO:0005758: mitochondrial intermembrane space	2.24E-02
19	GO:0005802: trans-Golgi network	2.50E-02
20	GO:0005905: clathrin-coated pit	2.57E-02
21	GO:0005681: spliceosomal complex	2.80E-02
22	GO:0005789: endoplasmic reticulum membrane	3.00E-02
23	GO:0005768: endosome	3.10E-02
24	GO:0005783: endoplasmic reticulum	3.19E-02
25	GO:0030136: clathrin-coated vesicle	3.28E-02
26	GO:0009706: chloroplast inner membrane	3.37E-02
27	GO:0005770: late endosome	3.65E-02
28	GO:0005777: peroxisome	4.25E-02
29	GO:0032580: Golgi cisterna membrane	4.86E-02