co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G22060

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033587: shikimate biosynthetic process	0.00E+00
2	GO:0032491: detection of molecule of fungal origin	0.00E+00
3	GO:0009268: response to pH	0.00E+00
4	GO:0032499: detection of peptidoglycan	0.00E+00
5	GO:0002752: cell surface pattern recognition receptor signaling pathway	0.00E+00
6	GO:0071327: cellular response to trehalose stimulus	0.00E+00
7	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
8	GO:1900367: positive regulation of defense response to insect	0.00E+00
9	GO:0002764: immune response-regulating signaling pathway	0.00E+00
10	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
11	GO:0006468: protein phosphorylation	2.69E-06
12	GO:0046777: protein autophosphorylation	3.30E-06
13	GO:0002238: response to molecule of fungal origin	1.36E-04
14	GO:0031348: negative regulation of defense response	1.69E-04
15	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.69E-04
16	GO:0042759: long-chain fatty acid biosynthetic process	3.02E-04
17	GO:0048482: plant ovule morphogenesis	3.02E-04
18	GO:0015969: guanosine tetraphosphate metabolic process	3.02E-04
19	GO:0010941: regulation of cell death	3.02E-04
20	GO:0051180: vitamin transport	3.02E-04
21	GO:0030974: thiamine pyrophosphate transport	3.02E-04
22	GO:0019673: GDP-mannose metabolic process	3.02E-04
23	GO:1901183: positive regulation of camalexin biosynthetic process	3.02E-04
24	GO:0006486: protein glycosylation	3.73E-04
25	GO:0010204: defense response signaling pathway, resistance gene-independent	3.75E-04
26	GO:0035556: intracellular signal transduction	3.84E-04
27	GO:0009751: response to salicylic acid	4.04E-04
28	GO:0006904: vesicle docking involved in exocytosis	5.46E-04
29	GO:0009620: response to fungus	5.63E-04
30	GO:0010271: regulation of chlorophyll catabolic process	6.60E-04
31	GO:0019725: cellular homeostasis	6.60E-04
32	GO:0046939: nucleotide phosphorylation	6.60E-04
33	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	6.60E-04
34	GO:0080185: effector dependent induction by symbiont of host immune response	6.60E-04
35	GO:0010618: aerenchyma formation	6.60E-04
36	GO:1902066: regulation of cell wall pectin metabolic process	6.60E-04
37	GO:0002240: response to molecule of oomycetes origin	6.60E-04
38	GO:0031349: positive regulation of defense response	6.60E-04
39	GO:0010115: regulation of abscisic acid biosynthetic process	6.60E-04
40	GO:0015893: drug transport	6.60E-04
41	GO:0043066: negative regulation of apoptotic process	6.60E-04
42	GO:0045732: positive regulation of protein catabolic process	6.60E-04
43	GO:0018105: peptidyl-serine phosphorylation	6.76E-04
44	GO:0010200: response to chitin	9.46E-04
45	GO:0009266: response to temperature stimulus	1.04E-03
46	GO:0002237: response to molecule of bacterial origin	1.04E-03
47	GO:0007034: vacuolar transport	1.04E-03
48	GO:0016045: detection of bacterium	1.07E-03
49	GO:0034051: negative regulation of plant-type hypersensitive response	1.07E-03
50	GO:0010359: regulation of anion channel activity	1.07E-03
51	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.07E-03
52	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	1.07E-03
53	GO:0051176: positive regulation of sulfur metabolic process	1.07E-03
54	GO:0045836: positive regulation of meiotic nuclear division	1.07E-03
55	GO:0046621: negative regulation of organ growth	1.07E-03
56	GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process	1.07E-03
57	GO:0010498: proteasomal protein catabolic process	1.07E-03
58	GO:0048586: regulation of long-day photoperiodism, flowering	1.07E-03
59	GO:0032922: circadian regulation of gene expression	1.07E-03
60	GO:1901672: positive regulation of systemic acquired resistance	1.07E-03
61	GO:0010167: response to nitrate	1.17E-03
62	GO:0009863: salicylic acid mediated signaling pathway	1.44E-03
63	GO:0071323: cellular response to chitin	1.53E-03
64	GO:0043967: histone H4 acetylation	1.53E-03
65	GO:0036092: phosphatidylinositol-3-phosphate biosynthetic process	1.53E-03
66	GO:0006986: response to unfolded protein	1.53E-03
67	GO:0046513: ceramide biosynthetic process	1.53E-03
68	GO:0046836: glycolipid transport	1.53E-03
69	GO:0048194: Golgi vesicle budding	1.53E-03
70	GO:0030100: regulation of endocytosis	1.53E-03
71	GO:0010104: regulation of ethylene-activated signaling pathway	1.53E-03
72	GO:0072583: clathrin-dependent endocytosis	1.53E-03
73	GO:0010731: protein glutathionylation	1.53E-03
74	GO:0042742: defense response to bacterium	1.63E-03
75	GO:0010017: red or far-red light signaling pathway	1.90E-03
76	GO:0016226: iron-sulfur cluster assembly	1.90E-03
77	GO:0006952: defense response	2.01E-03
78	GO:0080142: regulation of salicylic acid biosynthetic process	2.06E-03
79	GO:0060548: negative regulation of cell death	2.06E-03
80	GO:0045227: capsule polysaccharide biosynthetic process	2.06E-03
81	GO:0033358: UDP-L-arabinose biosynthetic process	2.06E-03
82	GO:0010508: positive regulation of autophagy	2.06E-03
83	GO:0071219: cellular response to molecule of bacterial origin	2.06E-03
84	GO:0018344: protein geranylgeranylation	2.63E-03
85	GO:0010225: response to UV-C	2.63E-03
86	GO:0009247: glycolipid biosynthetic process	2.63E-03
87	GO:0045927: positive regulation of growth	2.63E-03
88	GO:0009626: plant-type hypersensitive response	3.20E-03
89	GO:0010942: positive regulation of cell death	3.24E-03
90	GO:0010405: arabinogalactan protein metabolic process	3.24E-03
91	GO:0048317: seed morphogenesis	3.24E-03
92	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.24E-03
93	GO:0010310: regulation of hydrogen peroxide metabolic process	3.90E-03
94	GO:0009423: chorismate biosynthetic process	3.90E-03
95	GO:0031930: mitochondria-nucleus signaling pathway	3.90E-03
96	GO:1900056: negative regulation of leaf senescence	4.60E-03
97	GO:0070370: cellular heat acclimation	4.60E-03
98	GO:0001666: response to hypoxia	5.06E-03
99	GO:0019375: galactolipid biosynthetic process	5.35E-03
100	GO:0032875: regulation of DNA endoreduplication	5.35E-03
101	GO:0045010: actin nucleation	5.35E-03
102	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.35E-03
103	GO:0030162: regulation of proteolysis	5.35E-03
104	GO:0006491: N-glycan processing	5.35E-03
105	GO:1900150: regulation of defense response to fungus	5.35E-03
106	GO:0009816: defense response to bacterium, incompatible interaction	5.35E-03
107	GO:0009627: systemic acquired resistance	5.66E-03
108	GO:0030968: endoplasmic reticulum unfolded protein response	6.13E-03
109	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.13E-03
110	GO:0009932: cell tip growth	6.13E-03
111	GO:0009817: defense response to fungus, incompatible interaction	6.61E-03
112	GO:0006098: pentose-phosphate shunt	6.95E-03
113	GO:1900426: positive regulation of defense response to bacterium	7.80E-03
114	GO:0048268: clathrin coat assembly	7.80E-03
115	GO:0048354: mucilage biosynthetic process involved in seed coat development	7.80E-03
116	GO:0010380: regulation of chlorophyll biosynthetic process	7.80E-03
117	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	7.80E-03
118	GO:0009867: jasmonic acid mediated signaling pathway	8.39E-03
119	GO:0009737: response to abscisic acid	8.42E-03
120	GO:0015031: protein transport	8.43E-03
121	GO:0006032: chitin catabolic process	8.70E-03
122	GO:0006470: protein dephosphorylation	8.89E-03
123	GO:0009617: response to bacterium	9.39E-03
124	GO:0009073: aromatic amino acid family biosynthetic process	9.63E-03
125	GO:0006887: exocytosis	9.98E-03
126	GO:0006897: endocytosis	9.98E-03
127	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.06E-02
128	GO:0016925: protein sumoylation	1.06E-02
129	GO:0002213: defense response to insect	1.06E-02
130	GO:0015706: nitrate transport	1.06E-02
131	GO:0051707: response to other organism	1.08E-02
132	GO:0006626: protein targeting to mitochondrion	1.16E-02
133	GO:2000028: regulation of photoperiodism, flowering	1.16E-02
134	GO:0018107: peptidyl-threonine phosphorylation	1.16E-02
135	GO:0055046: microgametogenesis	1.16E-02
136	GO:0009785: blue light signaling pathway	1.16E-02
137	GO:0034605: cellular response to heat	1.26E-02
138	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.31E-02
139	GO:0046854: phosphatidylinositol phosphorylation	1.37E-02
140	GO:0007033: vacuole organization	1.37E-02
141	GO:0009225: nucleotide-sugar metabolic process	1.37E-02
142	GO:0034976: response to endoplasmic reticulum stress	1.48E-02
143	GO:0006487: protein N-linked glycosylation	1.59E-02
144	GO:0006338: chromatin remodeling	1.59E-02
145	GO:0009909: regulation of flower development	1.62E-02
146	GO:0009695: jasmonic acid biosynthetic process	1.71E-02
147	GO:0009611: response to wounding	1.77E-02
148	GO:0016567: protein ubiquitination	1.79E-02
149	GO:0003333: amino acid transmembrane transport	1.82E-02
150	GO:0016998: cell wall macromolecule catabolic process	1.82E-02
151	GO:0051321: meiotic cell cycle	1.82E-02
152	GO:0009625: response to insect	2.07E-02
153	GO:0006012: galactose metabolic process	2.07E-02
154	GO:0007165: signal transduction	2.18E-02
155	GO:0009306: protein secretion	2.20E-02
156	GO:0009561: megagametogenesis	2.20E-02
157	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.33E-02
158	GO:0051028: mRNA transport	2.33E-02
159	GO:0042391: regulation of membrane potential	2.46E-02
160	GO:0006885: regulation of pH	2.59E-02
161	GO:0048544: recognition of pollen	2.73E-02
162	GO:0009408: response to heat	2.80E-02
163	GO:0009749: response to glucose	2.87E-02
164	GO:0016310: phosphorylation	2.95E-02
165	GO:0048364: root development	2.96E-02
166	GO:0006891: intra-Golgi vesicle-mediated transport	3.01E-02
167	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.01E-02
168	GO:0010193: response to ozone	3.01E-02
169	GO:0030163: protein catabolic process	3.31E-02
170	GO:0019760: glucosinolate metabolic process	3.46E-02
171	GO:0010150: leaf senescence	3.61E-02
172	GO:0051607: defense response to virus	3.76E-02
173	GO:0000910: cytokinesis	3.76E-02
174	GO:0016579: protein deubiquitination	3.76E-02
175	GO:0009615: response to virus	3.92E-02
176	GO:0009911: positive regulation of flower development	3.92E-02
177	GO:0009739: response to gibberellin	4.03E-02
178	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.03E-02
179	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.07E-02
180	GO:0042128: nitrate assimilation	4.24E-02
181	GO:0048573: photoperiodism, flowering	4.40E-02
182	GO:0009813: flavonoid biosynthetic process	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:2001080: chitosan binding	0.00E+00
2	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
3	GO:0005522: profilin binding	0.00E+00
4	GO:0004107: chorismate synthase activity	0.00E+00
5	GO:0005212: structural constituent of eye lens	0.00E+00
6	GO:0016301: kinase activity	1.37E-07
7	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	9.78E-07
8	GO:0004674: protein serine/threonine kinase activity	1.48E-05
9	GO:0019199: transmembrane receptor protein kinase activity	5.93E-05
10	GO:0005515: protein binding	7.83E-05
11	GO:0005524: ATP binding	9.69E-05
12	GO:0046481: digalactosyldiacylglycerol synthase activity	3.02E-04
13	GO:0032050: clathrin heavy chain binding	3.02E-04
14	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.02E-04
15	GO:1901149: salicylic acid binding	3.02E-04
16	GO:0090422: thiamine pyrophosphate transporter activity	3.02E-04
17	GO:0004662: CAAX-protein geranylgeranyltransferase activity	3.02E-04
18	GO:1990188: euchromatin binding	3.02E-04
19	GO:0008446: GDP-mannose 4,6-dehydratase activity	3.02E-04
20	GO:0004568: chitinase activity	6.23E-04
21	GO:0008728: GTP diphosphokinase activity	6.60E-04
22	GO:0050291: sphingosine N-acyltransferase activity	6.60E-04
23	GO:0048531: beta-1,3-galactosyltransferase activity	6.60E-04
24	GO:0009931: calcium-dependent protein serine/threonine kinase activity	7.27E-04
25	GO:0004683: calmodulin-dependent protein kinase activity	7.77E-04
26	GO:0008378: galactosyltransferase activity	8.22E-04
27	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.29E-04
28	GO:0046423: allene-oxide cyclase activity	1.07E-03
29	GO:0019948: SUMO activating enzyme activity	1.07E-03
30	GO:0004190: aspartic-type endopeptidase activity	1.17E-03
31	GO:0017089: glycolipid transporter activity	1.53E-03
32	GO:0004571: mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	1.53E-03
33	GO:0019201: nucleotide kinase activity	1.53E-03
34	GO:0035250: UDP-galactosyltransferase activity	1.53E-03
35	GO:0050373: UDP-arabinose 4-epimerase activity	2.06E-03
36	GO:0051861: glycolipid binding	2.06E-03
37	GO:0045431: flavonol synthase activity	2.63E-03
38	GO:0004040: amidase activity	2.63E-03
39	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.24E-03
40	GO:0042578: phosphoric ester hydrolase activity	3.24E-03
41	GO:0004842: ubiquitin-protein transferase activity	3.31E-03
42	GO:0004672: protein kinase activity	3.77E-03
43	GO:0003730: mRNA 3'-UTR binding	3.90E-03
44	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.90E-03
45	GO:0004559: alpha-mannosidase activity	3.90E-03
46	GO:0004012: phospholipid-translocating ATPase activity	3.90E-03
47	GO:0004017: adenylate kinase activity	3.90E-03
48	GO:0003978: UDP-glucose 4-epimerase activity	3.90E-03
49	GO:0005509: calcium ion binding	4.50E-03
50	GO:0008375: acetylglucosaminyltransferase activity	5.66E-03
51	GO:0004430: 1-phosphatidylinositol 4-kinase activity	6.13E-03
52	GO:0071949: FAD binding	6.95E-03
53	GO:0015112: nitrate transmembrane transporter activity	7.80E-03
54	GO:0005545: 1-phosphatidylinositol binding	8.70E-03
55	GO:0008047: enzyme activator activity	8.70E-03
56	GO:0008559: xenobiotic-transporting ATPase activity	9.63E-03
57	GO:0005543: phospholipid binding	9.63E-03
58	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.06E-02
59	GO:0005525: GTP binding	1.15E-02
60	GO:0030552: cAMP binding	1.37E-02
61	GO:0030553: cGMP binding	1.37E-02
62	GO:0008061: chitin binding	1.37E-02
63	GO:0043130: ubiquitin binding	1.59E-02
64	GO:0031625: ubiquitin protein ligase binding	1.62E-02
65	GO:0051087: chaperone binding	1.71E-02
66	GO:0043424: protein histidine kinase binding	1.71E-02
67	GO:0005216: ion channel activity	1.71E-02
68	GO:0033612: receptor serine/threonine kinase binding	1.82E-02
69	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.82E-02
70	GO:0004722: protein serine/threonine phosphatase activity	2.42E-02
71	GO:0005451: monovalent cation:proton antiporter activity	2.46E-02
72	GO:0005249: voltage-gated potassium channel activity	2.46E-02
73	GO:0030551: cyclic nucleotide binding	2.46E-02
74	GO:0016758: transferase activity, transferring hexosyl groups	2.55E-02
75	GO:0030276: clathrin binding	2.59E-02
76	GO:0015299: solute:proton antiporter activity	2.73E-02
77	GO:0010181: FMN binding	2.73E-02
78	GO:0003924: GTPase activity	2.80E-02
79	GO:0004843: thiol-dependent ubiquitin-specific protease activity	3.01E-02
80	GO:0008565: protein transporter activity	3.13E-02
81	GO:0005516: calmodulin binding	3.14E-02
82	GO:0015385: sodium:proton antiporter activity	3.31E-02
83	GO:0051015: actin filament binding	3.31E-02
84	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.36E-02
85	GO:0004806: triglyceride lipase activity	4.40E-02
86	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.56E-02
87	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.57E-02
88	GO:0044212: transcription regulatory region DNA binding	4.81E-02
89	GO:0015238: drug transmembrane transporter activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.85E-06
2	GO:0005911: cell-cell junction	3.02E-04
3	GO:0005953: CAAX-protein geranylgeranyltransferase complex	3.02E-04
4	GO:0005901: caveola	6.60E-04
5	GO:0005654: nucleoplasm	8.73E-04
6	GO:0030139: endocytic vesicle	1.07E-03
7	GO:0000145: exocyst	3.74E-03
8	GO:0000815: ESCRT III complex	3.90E-03
9	GO:0000123: histone acetyltransferase complex	4.60E-03
10	GO:0005794: Golgi apparatus	6.71E-03
11	GO:0030125: clathrin vesicle coat	8.70E-03
12	GO:0048471: perinuclear region of cytoplasm	9.63E-03
13	GO:0090404: pollen tube tip	9.63E-03
14	GO:0005795: Golgi stack	1.37E-02
15	GO:0005768: endosome	1.37E-02
16	GO:0005635: nuclear envelope	1.57E-02
17	GO:0005758: mitochondrial intermembrane space	1.59E-02
18	GO:0005905: clathrin-coated pit	1.82E-02
19	GO:0030136: clathrin-coated vesicle	2.33E-02
20	GO:0016021: integral component of membrane	2.36E-02
21	GO:0005770: late endosome	2.59E-02
22	GO:0009504: cell plate	2.87E-02
23	GO:0032580: Golgi cisterna membrane	3.46E-02
24	GO:0019005: SCF ubiquitin ligase complex	4.73E-02
25	GO:0009707: chloroplast outer membrane	4.73E-02