GO Enrichment Analysis of Co-expressed Genes with
AT5G20935
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905177: tracheary element differentiation | 0.00E+00 |
| 2 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 3 | GO:0051503: adenine nucleotide transport | 0.00E+00 |
| 4 | GO:0090351: seedling development | 1.42E-05 |
| 5 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.60E-05 |
| 6 | GO:0071482: cellular response to light stimulus | 1.20E-04 |
| 7 | GO:0043087: regulation of GTPase activity | 1.40E-04 |
| 8 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 1.40E-04 |
| 9 | GO:0015969: guanosine tetraphosphate metabolic process | 1.40E-04 |
| 10 | GO:0006352: DNA-templated transcription, initiation | 2.44E-04 |
| 11 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.20E-04 |
| 12 | GO:0000256: allantoin catabolic process | 3.20E-04 |
| 13 | GO:0005977: glycogen metabolic process | 5.26E-04 |
| 14 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.26E-04 |
| 15 | GO:0010136: ureide catabolic process | 5.26E-04 |
| 16 | GO:0010623: programmed cell death involved in cell development | 5.26E-04 |
| 17 | GO:0006730: one-carbon metabolic process | 6.63E-04 |
| 18 | GO:2001141: regulation of RNA biosynthetic process | 7.53E-04 |
| 19 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.53E-04 |
| 20 | GO:0046902: regulation of mitochondrial membrane permeability | 7.53E-04 |
| 21 | GO:0006145: purine nucleobase catabolic process | 7.53E-04 |
| 22 | GO:0042989: sequestering of actin monomers | 7.53E-04 |
| 23 | GO:0009226: nucleotide-sugar biosynthetic process | 7.53E-04 |
| 24 | GO:0009793: embryo development ending in seed dormancy | 8.93E-04 |
| 25 | GO:0010021: amylopectin biosynthetic process | 9.98E-04 |
| 26 | GO:0051322: anaphase | 9.98E-04 |
| 27 | GO:0010508: positive regulation of autophagy | 9.98E-04 |
| 28 | GO:0031122: cytoplasmic microtubule organization | 9.98E-04 |
| 29 | GO:0071483: cellular response to blue light | 9.98E-04 |
| 30 | GO:0007059: chromosome segregation | 1.05E-03 |
| 31 | GO:0009107: lipoate biosynthetic process | 1.26E-03 |
| 32 | GO:0080110: sporopollenin biosynthetic process | 1.26E-03 |
| 33 | GO:0030041: actin filament polymerization | 1.26E-03 |
| 34 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.55E-03 |
| 35 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.55E-03 |
| 36 | GO:0009612: response to mechanical stimulus | 1.86E-03 |
| 37 | GO:0006400: tRNA modification | 2.18E-03 |
| 38 | GO:0051510: regulation of unidimensional cell growth | 2.18E-03 |
| 39 | GO:0009395: phospholipid catabolic process | 2.18E-03 |
| 40 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.18E-03 |
| 41 | GO:0009645: response to low light intensity stimulus | 2.18E-03 |
| 42 | GO:0010492: maintenance of shoot apical meristem identity | 2.52E-03 |
| 43 | GO:0048564: photosystem I assembly | 2.52E-03 |
| 44 | GO:0042255: ribosome assembly | 2.52E-03 |
| 45 | GO:0006353: DNA-templated transcription, termination | 2.52E-03 |
| 46 | GO:0006605: protein targeting | 2.52E-03 |
| 47 | GO:0032544: plastid translation | 2.88E-03 |
| 48 | GO:0009658: chloroplast organization | 3.22E-03 |
| 49 | GO:0000373: Group II intron splicing | 3.26E-03 |
| 50 | GO:0048507: meristem development | 3.26E-03 |
| 51 | GO:0009821: alkaloid biosynthetic process | 3.26E-03 |
| 52 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.26E-03 |
| 53 | GO:0010206: photosystem II repair | 3.26E-03 |
| 54 | GO:0042546: cell wall biogenesis | 3.75E-03 |
| 55 | GO:0006259: DNA metabolic process | 4.06E-03 |
| 56 | GO:0019538: protein metabolic process | 4.06E-03 |
| 57 | GO:0006265: DNA topological change | 4.48E-03 |
| 58 | GO:0045037: protein import into chloroplast stroma | 4.92E-03 |
| 59 | GO:0006094: gluconeogenesis | 5.37E-03 |
| 60 | GO:0009767: photosynthetic electron transport chain | 5.37E-03 |
| 61 | GO:0006096: glycolytic process | 5.73E-03 |
| 62 | GO:0010207: photosystem II assembly | 5.84E-03 |
| 63 | GO:0006833: water transport | 6.81E-03 |
| 64 | GO:0006629: lipid metabolic process | 6.93E-03 |
| 65 | GO:0007010: cytoskeleton organization | 7.32E-03 |
| 66 | GO:0010431: seed maturation | 8.38E-03 |
| 67 | GO:0071555: cell wall organization | 9.37E-03 |
| 68 | GO:0009306: protein secretion | 1.01E-02 |
| 69 | GO:0010089: xylem development | 1.01E-02 |
| 70 | GO:0010584: pollen exine formation | 1.01E-02 |
| 71 | GO:0019722: calcium-mediated signaling | 1.01E-02 |
| 72 | GO:0008033: tRNA processing | 1.12E-02 |
| 73 | GO:0034220: ion transmembrane transport | 1.12E-02 |
| 74 | GO:0048868: pollen tube development | 1.18E-02 |
| 75 | GO:0010268: brassinosteroid homeostasis | 1.18E-02 |
| 76 | GO:0045489: pectin biosynthetic process | 1.18E-02 |
| 77 | GO:0019252: starch biosynthetic process | 1.31E-02 |
| 78 | GO:0016132: brassinosteroid biosynthetic process | 1.37E-02 |
| 79 | GO:0032502: developmental process | 1.44E-02 |
| 80 | GO:0010583: response to cyclopentenone | 1.44E-02 |
| 81 | GO:0016032: viral process | 1.44E-02 |
| 82 | GO:0016125: sterol metabolic process | 1.58E-02 |
| 83 | GO:0007267: cell-cell signaling | 1.64E-02 |
| 84 | GO:0006810: transport | 1.67E-02 |
| 85 | GO:0000910: cytokinesis | 1.71E-02 |
| 86 | GO:0005975: carbohydrate metabolic process | 1.76E-02 |
| 87 | GO:0010027: thylakoid membrane organization | 1.79E-02 |
| 88 | GO:0016126: sterol biosynthetic process | 1.79E-02 |
| 89 | GO:0010411: xyloglucan metabolic process | 2.00E-02 |
| 90 | GO:0016311: dephosphorylation | 2.08E-02 |
| 91 | GO:0009817: defense response to fungus, incompatible interaction | 2.16E-02 |
| 92 | GO:0048527: lateral root development | 2.39E-02 |
| 93 | GO:0009853: photorespiration | 2.55E-02 |
| 94 | GO:0009644: response to high light intensity | 3.23E-02 |
| 95 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.87E-02 |
| 96 | GO:0048367: shoot system development | 4.35E-02 |
| 97 | GO:0048316: seed development | 4.35E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 3 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 5 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 6 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 9.68E-07 |
| 7 | GO:0001053: plastid sigma factor activity | 1.59E-05 |
| 8 | GO:0016987: sigma factor activity | 1.59E-05 |
| 9 | GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity | 1.40E-04 |
| 10 | GO:0008568: microtubule-severing ATPase activity | 1.40E-04 |
| 11 | GO:0008728: GTP diphosphokinase activity | 3.20E-04 |
| 12 | GO:0048531: beta-1,3-galactosyltransferase activity | 3.20E-04 |
| 13 | GO:0019156: isoamylase activity | 3.20E-04 |
| 14 | GO:0004802: transketolase activity | 3.20E-04 |
| 15 | GO:0004180: carboxypeptidase activity | 5.26E-04 |
| 16 | GO:0016992: lipoate synthase activity | 5.26E-04 |
| 17 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 7.53E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.98E-04 |
| 19 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.98E-04 |
| 20 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 9.98E-04 |
| 21 | GO:0048038: quinone binding | 1.20E-03 |
| 22 | GO:0005471: ATP:ADP antiporter activity | 1.26E-03 |
| 23 | GO:0008374: O-acyltransferase activity | 1.26E-03 |
| 24 | GO:0003785: actin monomer binding | 1.26E-03 |
| 25 | GO:0004556: alpha-amylase activity | 1.55E-03 |
| 26 | GO:0004462: lactoylglutathione lyase activity | 1.55E-03 |
| 27 | GO:0008236: serine-type peptidase activity | 2.11E-03 |
| 28 | GO:0008312: 7S RNA binding | 2.52E-03 |
| 29 | GO:0043022: ribosome binding | 2.52E-03 |
| 30 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.88E-03 |
| 31 | GO:0030955: potassium ion binding | 3.65E-03 |
| 32 | GO:0016844: strictosidine synthase activity | 3.65E-03 |
| 33 | GO:0004743: pyruvate kinase activity | 3.65E-03 |
| 34 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.85E-03 |
| 35 | GO:0008081: phosphoric diester hydrolase activity | 5.37E-03 |
| 36 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.84E-03 |
| 37 | GO:0005525: GTP binding | 6.84E-03 |
| 38 | GO:0003727: single-stranded RNA binding | 1.01E-02 |
| 39 | GO:0008080: N-acetyltransferase activity | 1.18E-02 |
| 40 | GO:0050662: coenzyme binding | 1.25E-02 |
| 41 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.37E-02 |
| 42 | GO:0004518: nuclease activity | 1.44E-02 |
| 43 | GO:0015250: water channel activity | 1.79E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 1.89E-02 |
| 45 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.00E-02 |
| 46 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.16E-02 |
| 47 | GO:0005096: GTPase activator activity | 2.23E-02 |
| 48 | GO:0003993: acid phosphatase activity | 2.63E-02 |
| 49 | GO:0004871: signal transducer activity | 2.88E-02 |
| 50 | GO:0004185: serine-type carboxypeptidase activity | 3.06E-02 |
| 51 | GO:0035091: phosphatidylinositol binding | 3.23E-02 |
| 52 | GO:0003924: GTPase activity | 3.39E-02 |
| 53 | GO:0003690: double-stranded DNA binding | 3.87E-02 |
| 54 | GO:0003824: catalytic activity | 3.90E-02 |
| 55 | GO:0004650: polygalacturonase activity | 4.55E-02 |
| 56 | GO:0016874: ligase activity | 4.65E-02 |
| 57 | GO:0003779: actin binding | 4.75E-02 |
| 58 | GO:0016491: oxidoreductase activity | 4.87E-02 |
| 59 | GO:0016746: transferase activity, transferring acyl groups | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010368: chloroplast isoamylase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.40E-15 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 9.81E-09 |
| 4 | GO:0080085: signal recognition particle, chloroplast targeting | 9.68E-07 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.46E-06 |
| 6 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.20E-04 |
| 7 | GO:0009574: preprophase band | 3.21E-04 |
| 8 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 9.98E-04 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.24E-03 |
| 10 | GO:0005773: vacuole | 1.83E-03 |
| 11 | GO:0046658: anchored component of plasma membrane | 2.64E-03 |
| 12 | GO:0009570: chloroplast stroma | 3.03E-03 |
| 13 | GO:0009536: plastid | 3.41E-03 |
| 14 | GO:0009579: thylakoid | 4.22E-03 |
| 15 | GO:0000311: plastid large ribosomal subunit | 4.92E-03 |
| 16 | GO:0005938: cell cortex | 5.37E-03 |
| 17 | GO:0031225: anchored component of membrane | 6.31E-03 |
| 18 | GO:0030176: integral component of endoplasmic reticulum membrane | 6.32E-03 |
| 19 | GO:0009706: chloroplast inner membrane | 6.89E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 7.84E-03 |
| 21 | GO:0042651: thylakoid membrane | 7.84E-03 |
| 22 | GO:0005623: cell | 8.87E-03 |
| 23 | GO:0015629: actin cytoskeleton | 9.48E-03 |
| 24 | GO:0019898: extrinsic component of membrane | 1.31E-02 |
| 25 | GO:0009295: nucleoid | 1.64E-02 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 1.79E-02 |
| 27 | GO:0019005: SCF ubiquitin ligase complex | 2.16E-02 |
| 28 | GO:0015934: large ribosomal subunit | 2.39E-02 |
| 29 | GO:0031977: thylakoid lumen | 2.88E-02 |
| 30 | GO:0009941: chloroplast envelope | 3.43E-02 |