co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G20635

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA	0.00E+00
3	GO:0080127: fruit septum development	0.00E+00
4	GO:0009733: response to auxin	1.80E-04
5	GO:0009734: auxin-activated signaling pathway	1.93E-04
6	GO:0009926: auxin polar transport	2.29E-04
7	GO:0051013: microtubule severing	3.02E-04
8	GO:0034757: negative regulation of iron ion transport	3.02E-04
9	GO:0010726: positive regulation of hydrogen peroxide metabolic process	3.02E-04
10	GO:0010583: response to cyclopentenone	4.29E-04
11	GO:0010024: phytochromobilin biosynthetic process	6.60E-04
12	GO:0010271: regulation of chlorophyll catabolic process	6.60E-04
13	GO:0001736: establishment of planar polarity	6.60E-04
14	GO:0005983: starch catabolic process	8.22E-04
15	GO:0045037: protein import into chloroplast stroma	8.22E-04
16	GO:0010582: floral meristem determinacy	8.22E-04
17	GO:0090506: axillary shoot meristem initiation	1.07E-03
18	GO:0034090: maintenance of meiotic sister chromatid cohesion	1.07E-03
19	GO:0080117: secondary growth	1.07E-03
20	GO:0071398: cellular response to fatty acid	1.07E-03
21	GO:0030029: actin filament-based process	1.07E-03
22	GO:0009825: multidimensional cell growth	1.17E-03
23	GO:0006863: purine nucleobase transport	1.30E-03
24	GO:0051513: regulation of monopolar cell growth	1.53E-03
25	GO:0051639: actin filament network formation	1.53E-03
26	GO:0034059: response to anoxia	1.53E-03
27	GO:0044211: CTP salvage	1.53E-03
28	GO:2000904: regulation of starch metabolic process	1.53E-03
29	GO:0051764: actin crosslink formation	2.06E-03
30	GO:0044206: UMP salvage	2.06E-03
31	GO:0009956: radial pattern formation	2.06E-03
32	GO:0071215: cellular response to abscisic acid stimulus	2.07E-03
33	GO:0010158: abaxial cell fate specification	2.63E-03
34	GO:0009696: salicylic acid metabolic process	2.63E-03
35	GO:0009107: lipoate biosynthetic process	2.63E-03
36	GO:0006206: pyrimidine nucleobase metabolic process	3.24E-03
37	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	3.24E-03
38	GO:0048831: regulation of shoot system development	3.24E-03
39	GO:0003006: developmental process involved in reproduction	3.24E-03
40	GO:0010942: positive regulation of cell death	3.24E-03
41	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.90E-03
42	GO:0006694: steroid biosynthetic process	3.90E-03
43	GO:0009942: longitudinal axis specification	3.90E-03
44	GO:0048509: regulation of meristem development	3.90E-03
45	GO:0010019: chloroplast-nucleus signaling pathway	3.90E-03
46	GO:0009610: response to symbiotic fungus	4.60E-03
47	GO:0010050: vegetative phase change	4.60E-03
48	GO:0000082: G1/S transition of mitotic cell cycle	4.60E-03
49	GO:0010444: guard mother cell differentiation	4.60E-03
50	GO:0046620: regulation of organ growth	5.35E-03
51	GO:0006402: mRNA catabolic process	5.35E-03
52	GO:0009850: auxin metabolic process	5.35E-03
53	GO:0009657: plastid organization	6.13E-03
54	GO:0032544: plastid translation	6.13E-03
55	GO:0007389: pattern specification process	6.13E-03
56	GO:0000160: phosphorelay signal transduction system	6.94E-03
57	GO:0009832: plant-type cell wall biogenesis	6.94E-03
58	GO:0048507: meristem development	6.95E-03
59	GO:0000373: Group II intron splicing	6.95E-03
60	GO:0048589: developmental growth	6.95E-03
61	GO:0009056: catabolic process	6.95E-03
62	GO:0040008: regulation of growth	7.06E-03
63	GO:0016571: histone methylation	7.80E-03
64	GO:0016573: histone acetylation	7.80E-03
65	GO:0005982: starch metabolic process	7.80E-03
66	GO:0010192: mucilage biosynthetic process	8.70E-03
67	GO:0009870: defense response signaling pathway, resistance gene-dependent	8.70E-03
68	GO:0048829: root cap development	8.70E-03
69	GO:0009641: shade avoidance	8.70E-03
70	GO:0009750: response to fructose	9.63E-03
71	GO:0016485: protein processing	9.63E-03
72	GO:0048765: root hair cell differentiation	9.63E-03
73	GO:0010152: pollen maturation	1.06E-02
74	GO:0009744: response to sucrose	1.08E-02
75	GO:0042546: cell wall biogenesis	1.13E-02
76	GO:0010102: lateral root morphogenesis	1.16E-02
77	GO:2000028: regulation of photoperiodism, flowering	1.16E-02
78	GO:0050826: response to freezing	1.16E-02
79	GO:0048467: gynoecium development	1.26E-02
80	GO:0010020: chloroplast fission	1.26E-02
81	GO:0009933: meristem structural organization	1.26E-02
82	GO:0010207: photosystem II assembly	1.26E-02
83	GO:0010223: secondary shoot formation	1.26E-02
84	GO:0010540: basipetal auxin transport	1.26E-02
85	GO:0009266: response to temperature stimulus	1.26E-02
86	GO:0080188: RNA-directed DNA methylation	1.37E-02
87	GO:0009736: cytokinin-activated signaling pathway	1.46E-02
88	GO:0009833: plant-type primary cell wall biogenesis	1.48E-02
89	GO:0006338: chromatin remodeling	1.59E-02
90	GO:0051017: actin filament bundle assembly	1.59E-02
91	GO:0043622: cortical microtubule organization	1.71E-02
92	GO:0006306: DNA methylation	1.82E-02
93	GO:0003333: amino acid transmembrane transport	1.82E-02
94	GO:0016226: iron-sulfur cluster assembly	1.95E-02
95	GO:0009693: ethylene biosynthetic process	2.07E-02
96	GO:0009686: gibberellin biosynthetic process	2.07E-02
97	GO:0001944: vasculature development	2.07E-02
98	GO:0048443: stamen development	2.20E-02
99	GO:0045492: xylan biosynthetic process	2.20E-02
100	GO:0006284: base-excision repair	2.20E-02
101	GO:0010091: trichome branching	2.20E-02
102	GO:0042127: regulation of cell proliferation	2.20E-02
103	GO:0051726: regulation of cell cycle	2.21E-02
104	GO:0009742: brassinosteroid mediated signaling pathway	2.21E-02
105	GO:0070417: cellular response to cold	2.33E-02
106	GO:0048653: anther development	2.46E-02
107	GO:0000226: microtubule cytoskeleton organization	2.46E-02
108	GO:0000271: polysaccharide biosynthetic process	2.46E-02
109	GO:0010087: phloem or xylem histogenesis	2.46E-02
110	GO:0009741: response to brassinosteroid	2.59E-02
111	GO:0045489: pectin biosynthetic process	2.59E-02
112	GO:0010305: leaf vascular tissue pattern formation	2.59E-02
113	GO:0009958: positive gravitropism	2.59E-02
114	GO:0010182: sugar mediated signaling pathway	2.59E-02
115	GO:0048544: recognition of pollen	2.73E-02
116	GO:0009749: response to glucose	2.87E-02
117	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.01E-02
118	GO:0071554: cell wall organization or biogenesis	3.01E-02
119	GO:0002229: defense response to oomycetes	3.01E-02
120	GO:0031047: gene silencing by RNA	3.16E-02
121	GO:0019761: glucosinolate biosynthetic process	3.16E-02
122	GO:0032502: developmental process	3.16E-02
123	GO:0010252: auxin homeostasis	3.46E-02
124	GO:0009639: response to red or far red light	3.46E-02
125	GO:0006464: cellular protein modification process	3.46E-02
126	GO:0051607: defense response to virus	3.76E-02
127	GO:0010029: regulation of seed germination	4.07E-02
128	GO:0009627: systemic acquired resistance	4.24E-02
129	GO:0016567: protein ubiquitination	4.37E-02
130	GO:0010411: xyloglucan metabolic process	4.40E-02
131	GO:0048573: photoperiodism, flowering	4.40E-02
132	GO:0009817: defense response to fungus, incompatible interaction	4.73E-02
133	GO:0030244: cellulose biosynthetic process	4.73E-02
134	GO:0071555: cell wall organization	4.81E-02
135	GO:0010311: lateral root formation	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
2	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
3	GO:0010011: auxin binding	5.93E-05
4	GO:0008568: microtubule-severing ATPase activity	3.02E-04
5	GO:0019203: carbohydrate phosphatase activity	3.02E-04
6	GO:0010296: prenylcysteine methylesterase activity	6.60E-04
7	GO:0016415: octanoyltransferase activity	6.60E-04
8	GO:0004047: aminomethyltransferase activity	6.60E-04
9	GO:0008805: carbon-monoxide oxygenase activity	6.60E-04
10	GO:0009884: cytokinin receptor activity	6.60E-04
11	GO:0019156: isoamylase activity	6.60E-04
12	GO:0017022: myosin binding	6.60E-04
13	GO:0017118: lipoyltransferase activity	6.60E-04
14	GO:0005034: osmosensor activity	1.07E-03
15	GO:0016707: gibberellin 3-beta-dioxygenase activity	1.07E-03
16	GO:0080031: methyl salicylate esterase activity	1.53E-03
17	GO:0005345: purine nucleobase transmembrane transporter activity	1.58E-03
18	GO:0004845: uracil phosphoribosyltransferase activity	2.06E-03
19	GO:0010328: auxin influx transmembrane transporter activity	2.06E-03
20	GO:0008725: DNA-3-methyladenine glycosylase activity	2.63E-03
21	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.63E-03
22	GO:0080030: methyl indole-3-acetate esterase activity	3.24E-03
23	GO:0004709: MAP kinase kinase kinase activity	3.24E-03
24	GO:1990538: xylan O-acetyltransferase activity	3.24E-03
25	GO:0004556: alpha-amylase activity	3.24E-03
26	GO:0004462: lactoylglutathione lyase activity	3.24E-03
27	GO:0004849: uridine kinase activity	3.90E-03
28	GO:0019900: kinase binding	3.90E-03
29	GO:0016759: cellulose synthase activity	4.25E-03
30	GO:0016413: O-acetyltransferase activity	4.78E-03
31	GO:0004871: signal transducer activity	5.63E-03
32	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	6.95E-03
33	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	6.95E-03
34	GO:0009672: auxin:proton symporter activity	7.80E-03
35	GO:0004673: protein histidine kinase activity	8.70E-03
36	GO:0004712: protein serine/threonine/tyrosine kinase activity	9.16E-03
37	GO:0009982: pseudouridine synthase activity	1.16E-02
38	GO:0010329: auxin efflux transmembrane transporter activity	1.16E-02
39	GO:0000155: phosphorelay sensor kinase activity	1.16E-02
40	GO:0043621: protein self-association	1.17E-02
41	GO:0003712: transcription cofactor activity	1.37E-02
42	GO:0031418: L-ascorbic acid binding	1.59E-02
43	GO:0008134: transcription factor binding	1.59E-02
44	GO:0043424: protein histidine kinase binding	1.71E-02
45	GO:0033612: receptor serine/threonine kinase binding	1.82E-02
46	GO:0003964: RNA-directed DNA polymerase activity	1.82E-02
47	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.95E-02
48	GO:0016760: cellulose synthase (UDP-forming) activity	2.07E-02
49	GO:0016301: kinase activity	2.25E-02
50	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.59E-02
51	GO:0019901: protein kinase binding	2.87E-02
52	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.98E-02
53	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.01E-02
54	GO:0008565: protein transporter activity	3.13E-02
55	GO:0000156: phosphorelay response regulator activity	3.31E-02
56	GO:0051015: actin filament binding	3.31E-02
57	GO:0008237: metallopeptidase activity	3.61E-02
58	GO:0005200: structural constituent of cytoskeleton	3.61E-02
59	GO:0051213: dioxygenase activity	3.92E-02
60	GO:0030247: polysaccharide binding	4.40E-02
61	GO:0004721: phosphoprotein phosphatase activity	4.40E-02
62	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.40E-02
63	GO:0008236: serine-type peptidase activity	4.56E-02
64	GO:0042802: identical protein binding	4.57E-02
65	GO:0005096: GTPase activator activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0009569: chloroplast starch grain	6.60E-04
4	GO:0032432: actin filament bundle	1.53E-03
5	GO:0009986: cell surface	4.60E-03
6	GO:0005884: actin filament	9.63E-03
7	GO:0031977: thylakoid lumen	9.98E-03
8	GO:0016602: CCAAT-binding factor complex	1.16E-02
9	GO:0030095: chloroplast photosystem II	1.26E-02
10	GO:0000419: DNA-directed RNA polymerase V complex	1.48E-02
11	GO:0005875: microtubule associated complex	1.48E-02
12	GO:0009654: photosystem II oxygen evolving complex	1.71E-02
13	GO:0009706: chloroplast inner membrane	2.09E-02
14	GO:0005623: cell	2.69E-02
15	GO:0009504: cell plate	2.87E-02
16	GO:0019898: extrinsic component of membrane	2.87E-02
17	GO:0016592: mediator complex	3.16E-02
18	GO:0010319: stromule	3.61E-02
19	GO:0009507: chloroplast	3.72E-02
20	GO:0030529: intracellular ribonucleoprotein complex	3.92E-02
21	GO:0005615: extracellular space	4.03E-02
22	GO:0009707: chloroplast outer membrane	4.73E-02
23	GO:0000151: ubiquitin ligase complex	4.73E-02
24	GO:0046658: anchored component of plasma membrane	4.75E-02