Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G19550

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006216: cytidine catabolic process0.00E+00
2GO:0006858: extracellular transport0.00E+00
3GO:0048034: heme O biosynthetic process0.00E+00
4GO:0046680: response to DDT0.00E+00
5GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
6GO:0010398: xylogalacturonan metabolic process0.00E+00
7GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
8GO:0072722: response to amitrole0.00E+00
9GO:0006903: vesicle targeting0.00E+00
10GO:0006102: isocitrate metabolic process3.56E-06
11GO:0046686: response to cadmium ion2.20E-05
12GO:0046283: anthocyanin-containing compound metabolic process5.47E-05
13GO:0006564: L-serine biosynthetic process5.47E-05
14GO:0006099: tricarboxylic acid cycle6.86E-05
15GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly8.04E-05
16GO:1901430: positive regulation of syringal lignin biosynthetic process2.18E-04
17GO:0033306: phytol metabolic process2.18E-04
18GO:0000032: cell wall mannoprotein biosynthetic process2.18E-04
19GO:0042964: thioredoxin reduction2.18E-04
20GO:0006144: purine nucleobase metabolic process2.18E-04
21GO:0019628: urate catabolic process2.18E-04
22GO:0010120: camalexin biosynthetic process2.33E-04
23GO:1901657: glycosyl compound metabolic process2.51E-04
24GO:0009821: alkaloid biosynthetic process2.82E-04
25GO:0009615: response to virus3.47E-04
26GO:0006888: ER to Golgi vesicle-mediated transport4.29E-04
27GO:0010372: positive regulation of gibberellin biosynthetic process4.86E-04
28GO:0015865: purine nucleotide transport4.86E-04
29GO:1902000: homogentisate catabolic process4.86E-04
30GO:0080026: response to indolebutyric acid4.86E-04
31GO:0043132: NAD transport4.86E-04
32GO:0006996: organelle organization4.86E-04
33GO:0015709: thiosulfate transport4.86E-04
34GO:0071422: succinate transmembrane transport4.86E-04
35GO:0046939: nucleotide phosphorylation4.86E-04
36GO:0010150: leaf senescence7.25E-04
37GO:0006839: mitochondrial transport7.78E-04
38GO:0009062: fatty acid catabolic process7.90E-04
39GO:0010359: regulation of anion channel activity7.90E-04
40GO:0055074: calcium ion homeostasis7.90E-04
41GO:0044375: regulation of peroxisome size7.90E-04
42GO:0090630: activation of GTPase activity7.90E-04
43GO:0006517: protein deglycosylation7.90E-04
44GO:0010272: response to silver ion7.90E-04
45GO:0009072: aromatic amino acid family metabolic process7.90E-04
46GO:0033591: response to L-ascorbic acid7.90E-04
47GO:0000162: tryptophan biosynthetic process8.29E-04
48GO:0006511: ubiquitin-dependent protein catabolic process9.37E-04
49GO:0046902: regulation of mitochondrial membrane permeability1.13E-03
50GO:0006612: protein targeting to membrane1.13E-03
51GO:0006893: Golgi to plasma membrane transport1.13E-03
52GO:0015858: nucleoside transport1.13E-03
53GO:0080024: indolebutyric acid metabolic process1.13E-03
54GO:0009298: GDP-mannose biosynthetic process1.13E-03
55GO:0015729: oxaloacetate transport1.13E-03
56GO:0030433: ubiquitin-dependent ERAD pathway1.20E-03
57GO:0010227: floral organ abscission1.31E-03
58GO:0006536: glutamate metabolic process1.50E-03
59GO:0010188: response to microbial phytotoxin1.50E-03
60GO:0006878: cellular copper ion homeostasis1.50E-03
61GO:0010222: stem vascular tissue pattern formation1.50E-03
62GO:0009620: response to fungus1.83E-03
63GO:0098719: sodium ion import across plasma membrane1.91E-03
64GO:0071423: malate transmembrane transport1.91E-03
65GO:0097428: protein maturation by iron-sulfur cluster transfer1.91E-03
66GO:0042742: defense response to bacterium2.06E-03
67GO:0009851: auxin biosynthetic process2.06E-03
68GO:0009228: thiamine biosynthetic process2.35E-03
69GO:0035435: phosphate ion transmembrane transport2.35E-03
70GO:0009972: cytidine deamination2.35E-03
71GO:0006561: proline biosynthetic process2.35E-03
72GO:0010264: myo-inositol hexakisphosphate biosynthetic process2.35E-03
73GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.83E-03
74GO:0009082: branched-chain amino acid biosynthetic process2.83E-03
75GO:0009099: valine biosynthetic process2.83E-03
76GO:0009554: megasporogenesis2.83E-03
77GO:0009058: biosynthetic process2.91E-03
78GO:0042744: hydrogen peroxide catabolic process3.21E-03
79GO:0015031: protein transport3.31E-03
80GO:1900056: negative regulation of leaf senescence3.33E-03
81GO:0071669: plant-type cell wall organization or biogenesis3.33E-03
82GO:0008272: sulfate transport3.33E-03
83GO:0050829: defense response to Gram-negative bacterium3.33E-03
84GO:0009751: response to salicylic acid3.43E-03
85GO:0006402: mRNA catabolic process3.86E-03
86GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.86E-03
87GO:0006491: N-glycan processing3.86E-03
88GO:0019430: removal of superoxide radicals4.42E-03
89GO:0060321: acceptance of pollen4.42E-03
90GO:0007186: G-protein coupled receptor signaling pathway4.42E-03
91GO:0009097: isoleucine biosynthetic process4.42E-03
92GO:0010497: plasmodesmata-mediated intercellular transport4.42E-03
93GO:0010204: defense response signaling pathway, resistance gene-independent4.42E-03
94GO:0006499: N-terminal protein myristoylation4.55E-03
95GO:0009407: toxin catabolic process4.55E-03
96GO:0007568: aging4.76E-03
97GO:0019432: triglyceride biosynthetic process5.00E-03
98GO:0006783: heme biosynthetic process5.00E-03
99GO:0046685: response to arsenic-containing substance5.00E-03
100GO:2000280: regulation of root development5.62E-03
101GO:0009098: leucine biosynthetic process5.62E-03
102GO:0048354: mucilage biosynthetic process involved in seed coat development5.62E-03
103GO:0051453: regulation of intracellular pH5.62E-03
104GO:0006032: chitin catabolic process6.25E-03
105GO:0009688: abscisic acid biosynthetic process6.25E-03
106GO:0043069: negative regulation of programmed cell death6.25E-03
107GO:0072593: reactive oxygen species metabolic process6.91E-03
108GO:0009682: induced systemic resistance6.91E-03
109GO:0052544: defense response by callose deposition in cell wall6.91E-03
110GO:0000272: polysaccharide catabolic process6.91E-03
111GO:0002213: defense response to insect7.60E-03
112GO:0016925: protein sumoylation7.60E-03
113GO:0006890: retrograde vesicle-mediated transport, Golgi to ER7.60E-03
114GO:0006790: sulfur compound metabolic process7.60E-03
115GO:0055114: oxidation-reduction process7.82E-03
116GO:0010102: lateral root morphogenesis8.30E-03
117GO:0006807: nitrogen compound metabolic process8.30E-03
118GO:0009718: anthocyanin-containing compound biosynthetic process8.30E-03
119GO:0006829: zinc II ion transport8.30E-03
120GO:0009846: pollen germination8.45E-03
121GO:0034605: cellular response to heat9.03E-03
122GO:0019853: L-ascorbic acid biosynthetic process9.79E-03
123GO:0010167: response to nitrate9.79E-03
124GO:0046854: phosphatidylinositol phosphorylation9.79E-03
125GO:0007031: peroxisome organization9.79E-03
126GO:0006096: glycolytic process1.07E-02
127GO:0045333: cellular respiration1.14E-02
128GO:0005992: trehalose biosynthetic process1.14E-02
129GO:0009626: plant-type hypersensitive response1.15E-02
130GO:0045454: cell redox homeostasis1.18E-02
131GO:0055085: transmembrane transport1.20E-02
132GO:0006874: cellular calcium ion homeostasis1.22E-02
133GO:0016998: cell wall macromolecule catabolic process1.30E-02
134GO:0015992: proton transport1.30E-02
135GO:0005975: carbohydrate metabolic process1.49E-02
136GO:0009561: megagametogenesis1.57E-02
137GO:0009306: protein secretion1.57E-02
138GO:0010089: xylem development1.57E-02
139GO:0051028: mRNA transport1.66E-02
140GO:0050832: defense response to fungus1.72E-02
141GO:0010118: stomatal movement1.75E-02
142GO:0045489: pectin biosynthetic process1.85E-02
143GO:0006662: glycerol ether metabolic process1.85E-02
144GO:0048544: recognition of pollen1.95E-02
145GO:0006814: sodium ion transport1.95E-02
146GO:0009646: response to absence of light1.95E-02
147GO:0010183: pollen tube guidance2.05E-02
148GO:0006635: fatty acid beta-oxidation2.15E-02
149GO:0031047: gene silencing by RNA2.25E-02
150GO:0045490: pectin catabolic process2.25E-02
151GO:0009630: gravitropism2.25E-02
152GO:0030163: protein catabolic process2.36E-02
153GO:0006979: response to oxidative stress2.44E-02
154GO:0019760: glucosinolate metabolic process2.46E-02
155GO:0006464: cellular protein modification process2.46E-02
156GO:0010252: auxin homeostasis2.46E-02
157GO:0006914: autophagy2.46E-02
158GO:0006904: vesicle docking involved in exocytosis2.57E-02
159GO:0071805: potassium ion transmembrane transport2.57E-02
160GO:0009617: response to bacterium2.68E-02
161GO:0016579: protein deubiquitination2.68E-02
162GO:0009735: response to cytokinin2.84E-02
163GO:0006974: cellular response to DNA damage stimulus3.02E-02
164GO:0009627: systemic acquired resistance3.02E-02
165GO:0009416: response to light stimulus3.17E-02
166GO:0016049: cell growth3.25E-02
167GO:0048767: root hair elongation3.49E-02
168GO:0010119: regulation of stomatal movement3.74E-02
169GO:0009860: pollen tube growth3.74E-02
170GO:0010043: response to zinc ion3.74E-02
171GO:0045087: innate immune response3.99E-02
172GO:0009723: response to ethylene4.01E-02
173GO:0034599: cellular response to oxidative stress4.12E-02
174GO:0006810: transport4.22E-02
175GO:0030001: metal ion transport4.38E-02
176GO:0006887: exocytosis4.51E-02
177GO:0006897: endocytosis4.51E-02
178GO:0046777: protein autophosphorylation4.59E-02
179GO:0009926: auxin polar transport4.78E-02
180GO:0009744: response to sucrose4.78E-02
181GO:0051707: response to other organism4.78E-02
RankGO TermAdjusted P value
1GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group0.00E+00
4GO:0047844: deoxycytidine deaminase activity0.00E+00
5GO:0044610: FMN transmembrane transporter activity0.00E+00
6GO:0004846: urate oxidase activity0.00E+00
7GO:0008495: protoheme IX farnesyltransferase activity0.00E+00
8GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
9GO:0016034: maleylacetoacetate isomerase activity0.00E+00
10GO:0051766: inositol trisphosphate kinase activity0.00E+00
11GO:0004449: isocitrate dehydrogenase (NAD+) activity6.27E-08
12GO:0036402: proteasome-activating ATPase activity8.04E-05
13GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity2.18E-04
14GO:0047326: inositol tetrakisphosphate 5-kinase activity2.18E-04
15GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity2.18E-04
16GO:0048037: cofactor binding2.18E-04
17GO:0004476: mannose-6-phosphate isomerase activity2.18E-04
18GO:0015230: FAD transmembrane transporter activity2.18E-04
19GO:0019786: Atg8-specific protease activity2.18E-04
20GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity2.18E-04
21GO:0004649: poly(ADP-ribose) glycohydrolase activity2.18E-04
22GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity2.18E-04
23GO:0010013: N-1-naphthylphthalamic acid binding2.18E-04
24GO:0004425: indole-3-glycerol-phosphate synthase activity2.18E-04
25GO:0000824: inositol tetrakisphosphate 3-kinase activity2.18E-04
26GO:0033984: indole-3-glycerol-phosphate lyase activity2.18E-04
27GO:0030955: potassium ion binding3.36E-04
28GO:0016844: strictosidine synthase activity3.36E-04
29GO:0004743: pyruvate kinase activity3.36E-04
30GO:0019172: glyoxalase III activity4.86E-04
31GO:0004775: succinate-CoA ligase (ADP-forming) activity4.86E-04
32GO:0019779: Atg8 activating enzyme activity4.86E-04
33GO:1901677: phosphate transmembrane transporter activity4.86E-04
34GO:0015117: thiosulfate transmembrane transporter activity4.86E-04
35GO:0008517: folic acid transporter activity4.86E-04
36GO:0004776: succinate-CoA ligase (GDP-forming) activity4.86E-04
37GO:0004566: beta-glucuronidase activity4.86E-04
38GO:0015228: coenzyme A transmembrane transporter activity4.86E-04
39GO:0052739: phosphatidylserine 1-acylhydrolase activity4.86E-04
40GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity4.86E-04
41GO:0004617: phosphoglycerate dehydrogenase activity4.86E-04
42GO:0051724: NAD transporter activity4.86E-04
43GO:0008422: beta-glucosidase activity7.38E-04
44GO:0017025: TBP-class protein binding7.45E-04
45GO:0005310: dicarboxylic acid transmembrane transporter activity7.90E-04
46GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity7.90E-04
47GO:0015141: succinate transmembrane transporter activity7.90E-04
48GO:0004364: glutathione transferase activity8.63E-04
49GO:0004298: threonine-type endopeptidase activity1.10E-03
50GO:0015131: oxaloacetate transmembrane transporter activity1.13E-03
51GO:0019201: nucleotide kinase activity1.13E-03
52GO:0052656: L-isoleucine transaminase activity1.13E-03
53GO:0004165: dodecenoyl-CoA delta-isomerase activity1.13E-03
54GO:0052654: L-leucine transaminase activity1.13E-03
55GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.13E-03
56GO:0004351: glutamate decarboxylase activity1.13E-03
57GO:0017077: oxidative phosphorylation uncoupler activity1.13E-03
58GO:0052655: L-valine transaminase activity1.13E-03
59GO:0051287: NAD binding1.15E-03
60GO:0000287: magnesium ion binding1.35E-03
61GO:0004601: peroxidase activity1.39E-03
62GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.50E-03
63GO:0004084: branched-chain-amino-acid transaminase activity1.50E-03
64GO:0004031: aldehyde oxidase activity1.50E-03
65GO:0050302: indole-3-acetaldehyde oxidase activity1.50E-03
66GO:0019776: Atg8 ligase activity1.50E-03
67GO:0010279: indole-3-acetic acid amido synthetase activity1.50E-03
68GO:0004930: G-protein coupled receptor activity1.50E-03
69GO:0004659: prenyltransferase activity1.50E-03
70GO:0004834: tryptophan synthase activity1.50E-03
71GO:0080122: AMP transmembrane transporter activity1.91E-03
72GO:0031386: protein tag1.91E-03
73GO:0005471: ATP:ADP antiporter activity1.91E-03
74GO:0008374: O-acyltransferase activity1.91E-03
75GO:0004791: thioredoxin-disulfide reductase activity1.92E-03
76GO:0031593: polyubiquitin binding2.35E-03
77GO:0004518: nuclease activity2.35E-03
78GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity2.35E-03
79GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity2.35E-03
80GO:0035252: UDP-xylosyltransferase activity2.35E-03
81GO:0004126: cytidine deaminase activity2.83E-03
82GO:0004017: adenylate kinase activity2.83E-03
83GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.83E-03
84GO:0004144: diacylglycerol O-acyltransferase activity2.83E-03
85GO:0005347: ATP transmembrane transporter activity2.83E-03
86GO:0004656: procollagen-proline 4-dioxygenase activity2.83E-03
87GO:0015217: ADP transmembrane transporter activity2.83E-03
88GO:0015140: malate transmembrane transporter activity3.33E-03
89GO:0102483: scopolin beta-glucosidase activity3.72E-03
90GO:0016798: hydrolase activity, acting on glycosyl bonds3.72E-03
91GO:0004311: farnesyltranstransferase activity3.86E-03
92GO:0004714: transmembrane receptor protein tyrosine kinase activity3.86E-03
93GO:0008970: phosphatidylcholine 1-acylhydrolase activity4.42E-03
94GO:0004568: chitinase activity6.25E-03
95GO:0015386: potassium:proton antiporter activity6.91E-03
96GO:0008794: arsenate reductase (glutaredoxin) activity6.91E-03
97GO:0004177: aminopeptidase activity6.91E-03
98GO:0008559: xenobiotic-transporting ATPase activity6.91E-03
99GO:0005198: structural molecule activity7.56E-03
100GO:0015116: sulfate transmembrane transporter activity7.60E-03
101GO:0004022: alcohol dehydrogenase (NAD) activity8.30E-03
102GO:0003824: catalytic activity8.48E-03
103GO:0008061: chitin binding9.79E-03
104GO:0004970: ionotropic glutamate receptor activity9.79E-03
105GO:0005217: intracellular ligand-gated ion channel activity9.79E-03
106GO:0031418: L-ascorbic acid binding1.14E-02
107GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.30E-02
108GO:0015035: protein disulfide oxidoreductase activity1.33E-02
109GO:0047134: protein-disulfide reductase activity1.66E-02
110GO:0030170: pyridoxal phosphate binding1.80E-02
111GO:0005199: structural constituent of cell wall1.85E-02
112GO:0046873: metal ion transmembrane transporter activity1.85E-02
113GO:0008565: protein transporter activity1.95E-02
114GO:0005509: calcium ion binding2.14E-02
115GO:0015297: antiporter activity2.14E-02
116GO:0004843: thiol-dependent ubiquitin-specific protease activity2.15E-02
117GO:0015385: sodium:proton antiporter activity2.36E-02
118GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.36E-02
119GO:0016301: kinase activity2.54E-02
120GO:0016597: amino acid binding2.68E-02
121GO:0042626: ATPase activity, coupled to transmembrane movement of substances2.85E-02
122GO:0009931: calcium-dependent protein serine/threonine kinase activity3.02E-02
123GO:0004683: calmodulin-dependent protein kinase activity3.14E-02
124GO:0005096: GTPase activator activity3.49E-02
125GO:0016788: hydrolase activity, acting on ester bonds3.54E-02
126GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.74E-02
127GO:0030145: manganese ion binding3.74E-02
128GO:0043531: ADP binding3.80E-02
129GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.99E-02
130GO:0003993: acid phosphatase activity4.12E-02
131GO:0008233: peptidase activity4.22E-02
132GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.46E-02
133GO:0020037: heme binding4.68E-02
134GO:0052689: carboxylic ester hydrolase activity4.74E-02
135GO:0005507: copper ion binding4.89E-02
RankGO TermAdjusted P value
1GO:0000502: proteasome complex1.34E-05
2GO:0005829: cytosol1.86E-05
3GO:0031597: cytosolic proteasome complex1.11E-04
4GO:0031595: nuclear proteasome complex1.47E-04
5GO:0016442: RISC complex2.18E-04
6GO:0008540: proteasome regulatory particle, base subcomplex3.36E-04
7GO:0046861: glyoxysomal membrane7.90E-04
8GO:0030130: clathrin coat of trans-Golgi network vesicle7.90E-04
9GO:0030132: clathrin coat of coated pit7.90E-04
10GO:0009530: primary cell wall7.90E-04
11GO:0005839: proteasome core complex1.10E-03
12GO:0005775: vacuolar lumen1.13E-03
13GO:0005773: vacuole1.16E-03
14GO:0005776: autophagosome1.50E-03
15GO:0005886: plasma membrane2.01E-03
16GO:0030127: COPII vesicle coat2.35E-03
17GO:0005794: Golgi apparatus2.95E-03
18GO:0005743: mitochondrial inner membrane3.14E-03
19GO:0031982: vesicle3.86E-03
20GO:0000421: autophagosome membrane3.86E-03
21GO:0005618: cell wall4.19E-03
22GO:0005779: integral component of peroxisomal membrane4.42E-03
23GO:0009514: glyoxysome4.42E-03
24GO:0019773: proteasome core complex, alpha-subunit complex4.42E-03
25GO:0031090: organelle membrane5.00E-03
26GO:0010494: cytoplasmic stress granule5.00E-03
27GO:0005768: endosome6.00E-03
28GO:0005765: lysosomal membrane6.91E-03
29GO:0048471: perinuclear region of cytoplasm6.91E-03
30GO:0005635: nuclear envelope9.73E-03
31GO:0005777: peroxisome1.03E-02
32GO:0031410: cytoplasmic vesicle1.39E-02
33GO:0005783: endoplasmic reticulum1.56E-02
34GO:0005802: trans-Golgi network1.70E-02
35GO:0000145: exocyst2.25E-02
36GO:0071944: cell periphery2.36E-02
37GO:0032580: Golgi cisterna membrane2.46E-02
38GO:0005778: peroxisomal membrane2.57E-02
39GO:0000932: P-body2.79E-02
40GO:0005788: endoplasmic reticulum lumen2.91E-02
41GO:0009536: plastid3.26E-02
42GO:0009505: plant-type cell wall3.36E-02
43GO:0009707: chloroplast outer membrane3.37E-02
44GO:0005643: nuclear pore3.37E-02
45GO:0000325: plant-type vacuole3.74E-02
46GO:0090406: pollen tube4.78E-02
<
Gene type



Gene DE type