| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 2 | GO:0042407: cristae formation | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 5 | GO:0009069: serine family amino acid metabolic process | 0.00E+00 |
| 6 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 7 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 8 | GO:0043392: negative regulation of DNA binding | 0.00E+00 |
| 9 | GO:2000469: negative regulation of peroxidase activity | 0.00E+00 |
| 10 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 11 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 12 | GO:0017038: protein import | 0.00E+00 |
| 13 | GO:0070178: D-serine metabolic process | 0.00E+00 |
| 14 | GO:0090697: post-embryonic plant organ morphogenesis | 0.00E+00 |
| 15 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 16 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 17 | GO:0005983: starch catabolic process | 5.84E-06 |
| 18 | GO:0018026: peptidyl-lysine monomethylation | 1.15E-05 |
| 19 | GO:0009658: chloroplast organization | 2.00E-05 |
| 20 | GO:0032544: plastid translation | 4.17E-05 |
| 21 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 8.30E-05 |
| 22 | GO:0046739: transport of virus in multicellular host | 8.30E-05 |
| 23 | GO:0006021: inositol biosynthetic process | 1.44E-04 |
| 24 | GO:0010027: thylakoid membrane organization | 2.38E-04 |
| 25 | GO:0042793: transcription from plastid promoter | 3.11E-04 |
| 26 | GO:1901259: chloroplast rRNA processing | 4.15E-04 |
| 27 | GO:0009955: adaxial/abaxial pattern specification | 4.15E-04 |
| 28 | GO:0010480: microsporocyte differentiation | 5.12E-04 |
| 29 | GO:0046520: sphingoid biosynthetic process | 5.12E-04 |
| 30 | GO:0006659: phosphatidylserine biosynthetic process | 5.12E-04 |
| 31 | GO:0042371: vitamin K biosynthetic process | 5.12E-04 |
| 32 | GO:0043686: co-translational protein modification | 5.12E-04 |
| 33 | GO:0043007: maintenance of rDNA | 5.12E-04 |
| 34 | GO:1902458: positive regulation of stomatal opening | 5.12E-04 |
| 35 | GO:0015904: tetracycline transport | 5.12E-04 |
| 36 | GO:0005991: trehalose metabolic process | 5.12E-04 |
| 37 | GO:0000023: maltose metabolic process | 5.12E-04 |
| 38 | GO:0000025: maltose catabolic process | 5.12E-04 |
| 39 | GO:1905039: carboxylic acid transmembrane transport | 5.12E-04 |
| 40 | GO:1905200: gibberellic acid transmembrane transport | 5.12E-04 |
| 41 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 5.12E-04 |
| 42 | GO:0080112: seed growth | 5.12E-04 |
| 43 | GO:0005980: glycogen catabolic process | 5.12E-04 |
| 44 | GO:0030198: extracellular matrix organization | 5.12E-04 |
| 45 | GO:0046620: regulation of organ growth | 6.64E-04 |
| 46 | GO:0080022: primary root development | 7.40E-04 |
| 47 | GO:0010497: plasmodesmata-mediated intercellular transport | 8.09E-04 |
| 48 | GO:0010182: sugar mediated signaling pathway | 8.14E-04 |
| 49 | GO:0009646: response to absence of light | 8.93E-04 |
| 50 | GO:0007154: cell communication | 1.10E-03 |
| 51 | GO:0071497: cellular response to freezing | 1.10E-03 |
| 52 | GO:1900033: negative regulation of trichome patterning | 1.10E-03 |
| 53 | GO:0042325: regulation of phosphorylation | 1.10E-03 |
| 54 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.10E-03 |
| 55 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.10E-03 |
| 56 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.10E-03 |
| 57 | GO:0006568: tryptophan metabolic process | 1.10E-03 |
| 58 | GO:0009629: response to gravity | 1.10E-03 |
| 59 | GO:0019388: galactose catabolic process | 1.10E-03 |
| 60 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.10E-03 |
| 61 | GO:0009773: photosynthetic electron transport in photosystem I | 1.53E-03 |
| 62 | GO:0006696: ergosterol biosynthetic process | 1.80E-03 |
| 63 | GO:0033591: response to L-ascorbic acid | 1.80E-03 |
| 64 | GO:0006954: inflammatory response | 1.80E-03 |
| 65 | GO:0006006: glucose metabolic process | 2.00E-03 |
| 66 | GO:0010588: cotyledon vascular tissue pattern formation | 2.00E-03 |
| 67 | GO:0015995: chlorophyll biosynthetic process | 2.09E-03 |
| 68 | GO:0010207: photosystem II assembly | 2.26E-03 |
| 69 | GO:0009817: defense response to fungus, incompatible interaction | 2.38E-03 |
| 70 | GO:0009409: response to cold | 2.56E-03 |
| 71 | GO:0009590: detection of gravity | 2.61E-03 |
| 72 | GO:0006168: adenine salvage | 2.61E-03 |
| 73 | GO:0043572: plastid fission | 2.61E-03 |
| 74 | GO:0016556: mRNA modification | 2.61E-03 |
| 75 | GO:0045338: farnesyl diphosphate metabolic process | 2.61E-03 |
| 76 | GO:0006166: purine ribonucleoside salvage | 2.61E-03 |
| 77 | GO:0006020: inositol metabolic process | 2.61E-03 |
| 78 | GO:0009102: biotin biosynthetic process | 2.61E-03 |
| 79 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.61E-03 |
| 80 | GO:0010306: rhamnogalacturonan II biosynthetic process | 2.61E-03 |
| 81 | GO:0010731: protein glutathionylation | 2.61E-03 |
| 82 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 2.61E-03 |
| 83 | GO:0048527: lateral root development | 2.87E-03 |
| 84 | GO:1901141: regulation of lignin biosynthetic process | 3.52E-03 |
| 85 | GO:0048629: trichome patterning | 3.52E-03 |
| 86 | GO:0010109: regulation of photosynthesis | 3.52E-03 |
| 87 | GO:0010107: potassium ion import | 3.52E-03 |
| 88 | GO:0022622: root system development | 3.52E-03 |
| 89 | GO:0006221: pyrimidine nucleotide biosynthetic process | 3.52E-03 |
| 90 | GO:0061077: chaperone-mediated protein folding | 3.80E-03 |
| 91 | GO:0010236: plastoquinone biosynthetic process | 4.52E-03 |
| 92 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.52E-03 |
| 93 | GO:0031365: N-terminal protein amino acid modification | 4.52E-03 |
| 94 | GO:0044209: AMP salvage | 4.52E-03 |
| 95 | GO:0098719: sodium ion import across plasma membrane | 4.52E-03 |
| 96 | GO:0009686: gibberellin biosynthetic process | 4.54E-03 |
| 97 | GO:0006855: drug transmembrane transport | 5.43E-03 |
| 98 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 5.60E-03 |
| 99 | GO:0006563: L-serine metabolic process | 5.60E-03 |
| 100 | GO:0000741: karyogamy | 5.60E-03 |
| 101 | GO:0046855: inositol phosphate dephosphorylation | 5.60E-03 |
| 102 | GO:0010405: arabinogalactan protein metabolic process | 5.60E-03 |
| 103 | GO:0006751: glutathione catabolic process | 5.60E-03 |
| 104 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 5.60E-03 |
| 105 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 5.60E-03 |
| 106 | GO:0009959: negative gravitropism | 5.60E-03 |
| 107 | GO:0010190: cytochrome b6f complex assembly | 5.60E-03 |
| 108 | GO:0016554: cytidine to uridine editing | 5.60E-03 |
| 109 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 5.60E-03 |
| 110 | GO:0010087: phloem or xylem histogenesis | 5.80E-03 |
| 111 | GO:0006662: glycerol ether metabolic process | 6.25E-03 |
| 112 | GO:0010197: polar nucleus fusion | 6.25E-03 |
| 113 | GO:0009741: response to brassinosteroid | 6.25E-03 |
| 114 | GO:0009958: positive gravitropism | 6.25E-03 |
| 115 | GO:0009416: response to light stimulus | 6.33E-03 |
| 116 | GO:0042026: protein refolding | 6.75E-03 |
| 117 | GO:0048509: regulation of meristem development | 6.75E-03 |
| 118 | GO:0030488: tRNA methylation | 6.75E-03 |
| 119 | GO:2000033: regulation of seed dormancy process | 6.75E-03 |
| 120 | GO:0080086: stamen filament development | 6.75E-03 |
| 121 | GO:0042372: phylloquinone biosynthetic process | 6.75E-03 |
| 122 | GO:0006458: 'de novo' protein folding | 6.75E-03 |
| 123 | GO:0048280: vesicle fusion with Golgi apparatus | 6.75E-03 |
| 124 | GO:0019252: starch biosynthetic process | 7.22E-03 |
| 125 | GO:0030307: positive regulation of cell growth | 7.99E-03 |
| 126 | GO:0032880: regulation of protein localization | 7.99E-03 |
| 127 | GO:0010161: red light signaling pathway | 7.99E-03 |
| 128 | GO:0009772: photosynthetic electron transport in photosystem II | 7.99E-03 |
| 129 | GO:0048437: floral organ development | 7.99E-03 |
| 130 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 7.99E-03 |
| 131 | GO:0032502: developmental process | 8.27E-03 |
| 132 | GO:0048367: shoot system development | 8.43E-03 |
| 133 | GO:1901657: glycosyl compound metabolic process | 8.82E-03 |
| 134 | GO:0006605: protein targeting | 9.31E-03 |
| 135 | GO:0010078: maintenance of root meristem identity | 9.31E-03 |
| 136 | GO:2000070: regulation of response to water deprivation | 9.31E-03 |
| 137 | GO:0006353: DNA-templated transcription, termination | 9.31E-03 |
| 138 | GO:0070413: trehalose metabolism in response to stress | 9.31E-03 |
| 139 | GO:0055075: potassium ion homeostasis | 9.31E-03 |
| 140 | GO:0052543: callose deposition in cell wall | 9.31E-03 |
| 141 | GO:0048564: photosystem I assembly | 9.31E-03 |
| 142 | GO:0005978: glycogen biosynthetic process | 9.31E-03 |
| 143 | GO:0010252: auxin homeostasis | 9.39E-03 |
| 144 | GO:0010100: negative regulation of photomorphogenesis | 1.07E-02 |
| 145 | GO:0009657: plastid organization | 1.07E-02 |
| 146 | GO:0043562: cellular response to nitrogen levels | 1.07E-02 |
| 147 | GO:0010099: regulation of photomorphogenesis | 1.07E-02 |
| 148 | GO:0071482: cellular response to light stimulus | 1.07E-02 |
| 149 | GO:0015996: chlorophyll catabolic process | 1.07E-02 |
| 150 | GO:0007186: G-protein coupled receptor signaling pathway | 1.07E-02 |
| 151 | GO:0009742: brassinosteroid mediated signaling pathway | 1.11E-02 |
| 152 | GO:0009733: response to auxin | 1.18E-02 |
| 153 | GO:0006783: heme biosynthetic process | 1.22E-02 |
| 154 | GO:0046685: response to arsenic-containing substance | 1.22E-02 |
| 155 | GO:0009821: alkaloid biosynthetic process | 1.22E-02 |
| 156 | GO:0090333: regulation of stomatal closure | 1.22E-02 |
| 157 | GO:0046916: cellular transition metal ion homeostasis | 1.22E-02 |
| 158 | GO:0048366: leaf development | 1.23E-02 |
| 159 | GO:0031425: chloroplast RNA processing | 1.37E-02 |
| 160 | GO:0051453: regulation of intracellular pH | 1.37E-02 |
| 161 | GO:0009638: phototropism | 1.37E-02 |
| 162 | GO:0043067: regulation of programmed cell death | 1.37E-02 |
| 163 | GO:1900865: chloroplast RNA modification | 1.37E-02 |
| 164 | GO:0009641: shade avoidance | 1.53E-02 |
| 165 | GO:0010162: seed dormancy process | 1.53E-02 |
| 166 | GO:0006896: Golgi to vacuole transport | 1.53E-02 |
| 167 | GO:0009813: flavonoid biosynthetic process | 1.55E-02 |
| 168 | GO:0015979: photosynthesis | 1.63E-02 |
| 169 | GO:0015770: sucrose transport | 1.69E-02 |
| 170 | GO:0048229: gametophyte development | 1.69E-02 |
| 171 | GO:0006415: translational termination | 1.69E-02 |
| 172 | GO:0009684: indoleacetic acid biosynthetic process | 1.69E-02 |
| 173 | GO:0010015: root morphogenesis | 1.69E-02 |
| 174 | GO:0000038: very long-chain fatty acid metabolic process | 1.69E-02 |
| 175 | GO:0009073: aromatic amino acid family biosynthetic process | 1.69E-02 |
| 176 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.86E-02 |
| 177 | GO:0045037: protein import into chloroplast stroma | 1.86E-02 |
| 178 | GO:0006790: sulfur compound metabolic process | 1.86E-02 |
| 179 | GO:0040008: regulation of growth | 1.94E-02 |
| 180 | GO:0034599: cellular response to oxidative stress | 1.95E-02 |
| 181 | GO:0010102: lateral root morphogenesis | 2.04E-02 |
| 182 | GO:0010075: regulation of meristem growth | 2.04E-02 |
| 183 | GO:0009767: photosynthetic electron transport chain | 2.04E-02 |
| 184 | GO:2000012: regulation of auxin polar transport | 2.04E-02 |
| 185 | GO:0010628: positive regulation of gene expression | 2.04E-02 |
| 186 | GO:0006631: fatty acid metabolic process | 2.22E-02 |
| 187 | GO:0010020: chloroplast fission | 2.23E-02 |
| 188 | GO:0009266: response to temperature stimulus | 2.23E-02 |
| 189 | GO:0009934: regulation of meristem structural organization | 2.23E-02 |
| 190 | GO:0005975: carbohydrate metabolic process | 2.23E-02 |
| 191 | GO:0048467: gynoecium development | 2.23E-02 |
| 192 | GO:0010143: cutin biosynthetic process | 2.23E-02 |
| 193 | GO:0016042: lipid catabolic process | 2.29E-02 |
| 194 | GO:0009901: anther dehiscence | 2.41E-02 |
| 195 | GO:0010030: positive regulation of seed germination | 2.41E-02 |
| 196 | GO:0070588: calcium ion transmembrane transport | 2.41E-02 |
| 197 | GO:0046854: phosphatidylinositol phosphorylation | 2.41E-02 |
| 198 | GO:0009640: photomorphogenesis | 2.41E-02 |
| 199 | GO:0019853: L-ascorbic acid biosynthetic process | 2.41E-02 |
| 200 | GO:0010187: negative regulation of seed germination | 2.81E-02 |
| 201 | GO:0005992: trehalose biosynthetic process | 2.81E-02 |
| 202 | GO:0080147: root hair cell development | 2.81E-02 |
| 203 | GO:0006418: tRNA aminoacylation for protein translation | 3.01E-02 |
| 204 | GO:0048511: rhythmic process | 3.22E-02 |
| 205 | GO:0048278: vesicle docking | 3.22E-02 |
| 206 | GO:0031348: negative regulation of defense response | 3.44E-02 |
| 207 | GO:0006730: one-carbon metabolic process | 3.44E-02 |
| 208 | GO:0030245: cellulose catabolic process | 3.44E-02 |
| 209 | GO:0016226: iron-sulfur cluster assembly | 3.44E-02 |
| 210 | GO:0006012: galactose metabolic process | 3.66E-02 |
| 211 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 3.66E-02 |
| 212 | GO:0016117: carotenoid biosynthetic process | 4.11E-02 |
| 213 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.11E-02 |
| 214 | GO:0008284: positive regulation of cell proliferation | 4.11E-02 |
| 215 | GO:0042147: retrograde transport, endosome to Golgi | 4.11E-02 |
| 216 | GO:0007165: signal transduction | 4.21E-02 |
| 217 | GO:0042335: cuticle development | 4.34E-02 |
| 218 | GO:0048653: anther development | 4.34E-02 |
| 219 | GO:0042631: cellular response to water deprivation | 4.34E-02 |
| 220 | GO:0010305: leaf vascular tissue pattern formation | 4.58E-02 |
| 221 | GO:0048868: pollen tube development | 4.58E-02 |
| 222 | GO:0010268: brassinosteroid homeostasis | 4.58E-02 |
| 223 | GO:0006885: regulation of pH | 4.58E-02 |
| 224 | GO:0048544: recognition of pollen | 4.82E-02 |
| 225 | GO:0061025: membrane fusion | 4.82E-02 |
| 226 | GO:0006814: sodium ion transport | 4.82E-02 |
| 227 | GO:0042752: regulation of circadian rhythm | 4.82E-02 |
| 228 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.82E-02 |
| 229 | GO:0009735: response to cytokinin | 4.83E-02 |
| 230 | GO:0006810: transport | 4.97E-02 |