co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G19430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046486: glycerolipid metabolic process	0.00E+00
2	GO:0006907: pinocytosis	0.00E+00
3	GO:0019685: photosynthesis, dark reaction	0.00E+00
4	GO:0010422: regulation of brassinosteroid biosynthetic process	0.00E+00
5	GO:0009583: detection of light stimulus	0.00E+00
6	GO:0045176: apical protein localization	0.00E+00
7	GO:0071000: response to magnetism	0.00E+00
8	GO:0000372: Group I intron splicing	0.00E+00
9	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
10	GO:0002949: tRNA threonylcarbamoyladenosine modification	0.00E+00
11	GO:0080127: fruit septum development	0.00E+00
12	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
13	GO:0000373: Group II intron splicing	3.87E-06
14	GO:0009926: auxin polar transport	4.12E-05
15	GO:0046620: regulation of organ growth	6.23E-05
16	GO:0005992: trehalose biosynthetic process	6.13E-04
17	GO:0072387: flavin adenine dinucleotide metabolic process	7.00E-04
18	GO:0043087: regulation of GTPase activity	7.00E-04
19	GO:0043609: regulation of carbon utilization	7.00E-04
20	GO:0090548: response to nitrate starvation	7.00E-04
21	GO:0000066: mitochondrial ornithine transport	7.00E-04
22	GO:0034757: negative regulation of iron ion transport	7.00E-04
23	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	7.00E-04
24	GO:1902025: nitrate import	7.00E-04
25	GO:0009733: response to auxin	8.13E-04
26	GO:0009734: auxin-activated signaling pathway	1.12E-03
27	GO:0071482: cellular response to light stimulus	1.28E-03
28	GO:0009958: positive gravitropism	1.47E-03
29	GO:0001736: establishment of planar polarity	1.51E-03
30	GO:0080009: mRNA methylation	1.51E-03
31	GO:0009786: regulation of asymmetric cell division	1.51E-03
32	GO:0006420: arginyl-tRNA aminoacylation	1.51E-03
33	GO:0010343: singlet oxygen-mediated programmed cell death	1.51E-03
34	GO:1901529: positive regulation of anion channel activity	1.51E-03
35	GO:1900871: chloroplast mRNA modification	1.51E-03
36	GO:0010617: circadian regulation of calcium ion oscillation	1.51E-03
37	GO:0010271: regulation of chlorophyll catabolic process	1.51E-03
38	GO:0006432: phenylalanyl-tRNA aminoacylation	1.51E-03
39	GO:0006650: glycerophospholipid metabolic process	1.51E-03
40	GO:0099402: plant organ development	1.51E-03
41	GO:1900865: chloroplast RNA modification	1.81E-03
42	GO:0010583: response to cyclopentenone	2.11E-03
43	GO:0048829: root cap development	2.12E-03
44	GO:0071398: cellular response to fatty acid	2.49E-03
45	GO:0030029: actin filament-based process	2.49E-03
46	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	2.49E-03
47	GO:0045910: negative regulation of DNA recombination	2.49E-03
48	GO:0090506: axillary shoot meristem initiation	2.49E-03
49	GO:1902448: positive regulation of shade avoidance	2.49E-03
50	GO:0006000: fructose metabolic process	2.49E-03
51	GO:0046168: glycerol-3-phosphate catabolic process	2.49E-03
52	GO:0080117: secondary growth	2.49E-03
53	GO:1901672: positive regulation of systemic acquired resistance	2.49E-03
54	GO:0042780: tRNA 3'-end processing	2.49E-03
55	GO:0010582: floral meristem determinacy	2.82E-03
56	GO:2001141: regulation of RNA biosynthetic process	3.63E-03
57	GO:0045017: glycerolipid biosynthetic process	3.63E-03
58	GO:0010371: regulation of gibberellin biosynthetic process	3.63E-03
59	GO:0010540: basipetal auxin transport	3.63E-03
60	GO:0051513: regulation of monopolar cell growth	3.63E-03
61	GO:0051639: actin filament network formation	3.63E-03
62	GO:0034059: response to anoxia	3.63E-03
63	GO:0010239: chloroplast mRNA processing	3.63E-03
64	GO:0044211: CTP salvage	3.63E-03
65	GO:0006072: glycerol-3-phosphate metabolic process	3.63E-03
66	GO:0009800: cinnamic acid biosynthetic process	3.63E-03
67	GO:1901332: negative regulation of lateral root development	3.63E-03
68	GO:2000904: regulation of starch metabolic process	3.63E-03
69	GO:0009956: radial pattern formation	4.90E-03
70	GO:0009755: hormone-mediated signaling pathway	4.90E-03
71	GO:0051764: actin crosslink formation	4.90E-03
72	GO:0006021: inositol biosynthetic process	4.90E-03
73	GO:0008295: spermidine biosynthetic process	4.90E-03
74	GO:0044206: UMP salvage	4.90E-03
75	GO:1902347: response to strigolactone	4.90E-03
76	GO:0051017: actin filament bundle assembly	5.05E-03
77	GO:0009416: response to light stimulus	5.72E-03
78	GO:0016123: xanthophyll biosynthetic process	6.30E-03
79	GO:0010438: cellular response to sulfur starvation	6.30E-03
80	GO:0010158: abaxial cell fate specification	6.30E-03
81	GO:0080110: sporopollenin biosynthetic process	6.30E-03
82	GO:0016131: brassinosteroid metabolic process	6.30E-03
83	GO:0009696: salicylic acid metabolic process	6.30E-03
84	GO:0010117: photoprotection	6.30E-03
85	GO:0046283: anthocyanin-containing compound metabolic process	6.30E-03
86	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	7.35E-03
87	GO:0071215: cellular response to abscisic acid stimulus	7.35E-03
88	GO:0048827: phyllome development	7.82E-03
89	GO:0016554: cytidine to uridine editing	7.82E-03
90	GO:0060918: auxin transport	7.82E-03
91	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	7.82E-03
92	GO:0048831: regulation of shoot system development	7.82E-03
93	GO:1901371: regulation of leaf morphogenesis	7.82E-03
94	GO:0003006: developmental process involved in reproduction	7.82E-03
95	GO:0006559: L-phenylalanine catabolic process	7.82E-03
96	GO:0006206: pyrimidine nucleobase metabolic process	7.82E-03
97	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	9.46E-03
98	GO:0010310: regulation of hydrogen peroxide metabolic process	9.46E-03
99	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	9.46E-03
100	GO:0006694: steroid biosynthetic process	9.46E-03
101	GO:0009942: longitudinal axis specification	9.46E-03
102	GO:0048509: regulation of meristem development	9.46E-03
103	GO:0031930: mitochondria-nucleus signaling pathway	9.46E-03
104	GO:0040008: regulation of growth	9.58E-03
105	GO:0045489: pectin biosynthetic process	1.01E-02
106	GO:0009451: RNA modification	1.06E-02
107	GO:0007018: microtubule-based movement	1.09E-02
108	GO:0009646: response to absence of light	1.09E-02
109	GO:0015693: magnesium ion transport	1.12E-02
110	GO:0009610: response to symbiotic fungus	1.12E-02
111	GO:0006955: immune response	1.12E-02
112	GO:0010050: vegetative phase change	1.12E-02
113	GO:0010098: suspensor development	1.12E-02
114	GO:0051510: regulation of unidimensional cell growth	1.12E-02
115	GO:0045892: negative regulation of transcription, DNA-templated	1.18E-02
116	GO:0000105: histidine biosynthetic process	1.31E-02
117	GO:0006402: mRNA catabolic process	1.31E-02
118	GO:0010439: regulation of glucosinolate biosynthetic process	1.31E-02
119	GO:0009819: drought recovery	1.31E-02
120	GO:0009850: auxin metabolic process	1.31E-02
121	GO:0070413: trehalose metabolism in response to stress	1.31E-02
122	GO:2000070: regulation of response to water deprivation	1.31E-02
123	GO:0006002: fructose 6-phosphate metabolic process	1.51E-02
124	GO:0009827: plant-type cell wall modification	1.51E-02
125	GO:0007186: G-protein coupled receptor signaling pathway	1.51E-02
126	GO:0009657: plastid organization	1.51E-02
127	GO:0032544: plastid translation	1.51E-02
128	GO:0007389: pattern specification process	1.51E-02
129	GO:0009828: plant-type cell wall loosening	1.53E-02
130	GO:0009639: response to red or far red light	1.53E-02
131	GO:0009056: catabolic process	1.71E-02
132	GO:0006098: pentose-phosphate shunt	1.71E-02
133	GO:0046916: cellular transition metal ion homeostasis	1.71E-02
134	GO:0048507: meristem development	1.71E-02
135	GO:0016573: histone acetylation	1.93E-02
136	GO:1900426: positive regulation of defense response to bacterium	1.93E-02
137	GO:0009638: phototropism	1.93E-02
138	GO:0042761: very long-chain fatty acid biosynthetic process	1.93E-02
139	GO:0010018: far-red light signaling pathway	1.93E-02
140	GO:0016571: histone methylation	1.93E-02
141	GO:0009658: chloroplast organization	1.99E-02
142	GO:0009627: systemic acquired resistance	2.04E-02
143	GO:0009641: shade avoidance	2.15E-02
144	GO:0006298: mismatch repair	2.15E-02
145	GO:0006949: syncytium formation	2.15E-02
146	GO:0010192: mucilage biosynthetic process	2.15E-02
147	GO:0009299: mRNA transcription	2.15E-02
148	GO:0006535: cysteine biosynthetic process from serine	2.15E-02
149	GO:0048765: root hair cell differentiation	2.39E-02
150	GO:0009682: induced systemic resistance	2.39E-02
151	GO:0030244: cellulose biosynthetic process	2.39E-02
152	GO:0006352: DNA-templated transcription, initiation	2.39E-02
153	GO:0018298: protein-chromophore linkage	2.39E-02
154	GO:0000160: phosphorelay signal transduction system	2.51E-02
155	GO:0010311: lateral root formation	2.51E-02
156	GO:0071555: cell wall organization	2.55E-02
157	GO:0006790: sulfur compound metabolic process	2.63E-02
158	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.63E-02
159	GO:0045037: protein import into chloroplast stroma	2.63E-02
160	GO:2000028: regulation of photoperiodism, flowering	2.88E-02
161	GO:0010229: inflorescence development	2.88E-02
162	GO:0010075: regulation of meristem growth	2.88E-02
163	GO:0009725: response to hormone	2.88E-02
164	GO:0006094: gluconeogenesis	2.88E-02
165	GO:0010102: lateral root morphogenesis	2.88E-02
166	GO:0009785: blue light signaling pathway	2.88E-02
167	GO:0009266: response to temperature stimulus	3.14E-02
168	GO:0048467: gynoecium development	3.14E-02
169	GO:0010207: photosystem II assembly	3.14E-02
170	GO:0010020: chloroplast fission	3.14E-02
171	GO:0009933: meristem structural organization	3.14E-02
172	GO:0010223: secondary shoot formation	3.14E-02
173	GO:0009793: embryo development ending in seed dormancy	3.20E-02
174	GO:0046854: phosphatidylinositol phosphorylation	3.41E-02
175	GO:0009825: multidimensional cell growth	3.41E-02
176	GO:0006839: mitochondrial transport	3.45E-02
177	GO:0006863: purine nucleobase transport	3.68E-02
178	GO:0009833: plant-type primary cell wall biogenesis	3.68E-02
179	GO:0010025: wax biosynthetic process	3.68E-02
180	GO:0042753: positive regulation of circadian rhythm	3.68E-02
181	GO:0010114: response to red light	3.90E-02
182	GO:2000377: regulation of reactive oxygen species metabolic process	3.96E-02
183	GO:0019344: cysteine biosynthetic process	3.96E-02
184	GO:0030150: protein import into mitochondrial matrix	3.96E-02
185	GO:0006338: chromatin remodeling	3.96E-02
186	GO:0007010: cytoskeleton organization	3.96E-02
187	GO:0006289: nucleotide-excision repair	3.96E-02
188	GO:0009644: response to high light intensity	4.22E-02
189	GO:0009636: response to toxic substance	4.38E-02
190	GO:0009965: leaf morphogenesis	4.38E-02
191	GO:0016998: cell wall macromolecule catabolic process	4.55E-02
192	GO:0010431: seed maturation	4.55E-02
193	GO:0003333: amino acid transmembrane transport	4.55E-02
194	GO:0016226: iron-sulfur cluster assembly	4.85E-02
195	GO:0035428: hexose transmembrane transport	4.85E-02
196	GO:0009664: plant-type cell wall organization	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
2	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
3	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
4	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
5	GO:0061711: N(6)-L-threonylcarbamoyladenine synthase	0.00E+00
6	GO:0004401: histidinol-phosphatase activity	0.00E+00
7	GO:0008805: carbon-monoxide oxygenase activity	2.09E-05
8	GO:0001872: (1->3)-beta-D-glucan binding	1.41E-04
9	GO:0004805: trehalose-phosphatase activity	1.88E-04
10	GO:0003723: RNA binding	2.45E-04
11	GO:0031418: L-ascorbic acid binding	6.13E-04
12	GO:0010347: L-galactose-1-phosphate phosphatase activity	7.00E-04
13	GO:0005227: calcium activated cation channel activity	7.00E-04
14	GO:0042834: peptidoglycan binding	7.00E-04
15	GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity	7.00E-04
16	GO:0005290: L-histidine transmembrane transporter activity	7.00E-04
17	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.00E-04
18	GO:0050017: L-3-cyanoalanine synthase activity	1.51E-03
19	GO:0017118: lipoyltransferase activity	1.51E-03
20	GO:0043425: bHLH transcription factor binding	1.51E-03
21	GO:0004814: arginine-tRNA ligase activity	1.51E-03
22	GO:0010296: prenylcysteine methylesterase activity	1.51E-03
23	GO:0004047: aminomethyltransferase activity	1.51E-03
24	GO:0004766: spermidine synthase activity	1.51E-03
25	GO:0052832: inositol monophosphate 3-phosphatase activity	1.51E-03
26	GO:0008934: inositol monophosphate 1-phosphatase activity	1.51E-03
27	GO:0052833: inositol monophosphate 4-phosphatase activity	1.51E-03
28	GO:0000064: L-ornithine transmembrane transporter activity	1.51E-03
29	GO:0004826: phenylalanine-tRNA ligase activity	1.51E-03
30	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.51E-03
31	GO:0050736: O-malonyltransferase activity	1.51E-03
32	GO:0009884: cytokinin receptor activity	1.51E-03
33	GO:0005034: osmosensor activity	2.49E-03
34	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	2.49E-03
35	GO:0016707: gibberellin 3-beta-dioxygenase activity	2.49E-03
36	GO:0045548: phenylalanine ammonia-lyase activity	2.49E-03
37	GO:0003913: DNA photolyase activity	2.49E-03
38	GO:0042781: 3'-tRNA processing endoribonuclease activity	2.49E-03
39	GO:0004148: dihydrolipoyl dehydrogenase activity	2.49E-03
40	GO:0009882: blue light photoreceptor activity	3.63E-03
41	GO:0080031: methyl salicylate esterase activity	3.63E-03
42	GO:0015189: L-lysine transmembrane transporter activity	3.63E-03
43	GO:0015181: arginine transmembrane transporter activity	3.63E-03
44	GO:0017172: cysteine dioxygenase activity	3.63E-03
45	GO:0004871: signal transducer activity	3.82E-03
46	GO:0001053: plastid sigma factor activity	4.90E-03
47	GO:0004845: uracil phosphoribosyltransferase activity	4.90E-03
48	GO:0010011: auxin binding	4.90E-03
49	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	4.90E-03
50	GO:0016987: sigma factor activity	4.90E-03
51	GO:0010328: auxin influx transmembrane transporter activity	4.90E-03
52	GO:0070628: proteasome binding	4.90E-03
53	GO:0019199: transmembrane receptor protein kinase activity	4.90E-03
54	GO:0042277: peptide binding	4.90E-03
55	GO:0004519: endonuclease activity	6.22E-03
56	GO:0005471: ATP:ADP antiporter activity	6.30E-03
57	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	6.30E-03
58	GO:0008725: DNA-3-methyladenine glycosylase activity	6.30E-03
59	GO:0030570: pectate lyase activity	7.35E-03
60	GO:2001070: starch binding	7.82E-03
61	GO:0030983: mismatched DNA binding	7.82E-03
62	GO:0080030: methyl indole-3-acetate esterase activity	7.82E-03
63	GO:0004332: fructose-bisphosphate aldolase activity	7.82E-03
64	GO:0004709: MAP kinase kinase kinase activity	7.82E-03
65	GO:0031593: polyubiquitin binding	7.82E-03
66	GO:0000293: ferric-chelate reductase activity	7.82E-03
67	GO:0019900: kinase binding	9.46E-03
68	GO:0004124: cysteine synthase activity	9.46E-03
69	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	9.46E-03
70	GO:0016832: aldehyde-lyase activity	9.46E-03
71	GO:0004849: uridine kinase activity	9.46E-03
72	GO:0004656: procollagen-proline 4-dioxygenase activity	9.46E-03
73	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.04E-02
74	GO:0050662: coenzyme binding	1.09E-02
75	GO:0009881: photoreceptor activity	1.12E-02
76	GO:0019901: protein kinase binding	1.17E-02
77	GO:0004518: nuclease activity	1.34E-02
78	GO:0051015: actin filament binding	1.43E-02
79	GO:0046914: transition metal ion binding	1.51E-02
80	GO:0016759: cellulose synthase activity	1.53E-02
81	GO:0003684: damaged DNA binding	1.53E-02
82	GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity	1.71E-02
83	GO:0071949: FAD binding	1.71E-02
84	GO:0016413: O-acetyltransferase activity	1.72E-02
85	GO:0009672: auxin:proton symporter activity	1.93E-02
86	GO:0004673: protein histidine kinase activity	2.15E-02
87	GO:0030247: polysaccharide binding	2.15E-02
88	GO:0005096: GTPase activator activity	2.51E-02
89	GO:0000049: tRNA binding	2.63E-02
90	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.77E-02
91	GO:0015095: magnesium ion transmembrane transporter activity	2.88E-02
92	GO:0000155: phosphorelay sensor kinase activity	2.88E-02
93	GO:0009982: pseudouridine synthase activity	2.88E-02
94	GO:0003725: double-stranded RNA binding	2.88E-02
95	GO:0010329: auxin efflux transmembrane transporter activity	2.88E-02
96	GO:0015266: protein channel activity	2.88E-02
97	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.31E-02
98	GO:0008061: chitin binding	3.41E-02
99	GO:0003712: transcription cofactor activity	3.41E-02
100	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.68E-02
101	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.68E-02
102	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.68E-02
103	GO:0043130: ubiquitin binding	3.96E-02
104	GO:0005528: FK506 binding	3.96E-02
105	GO:0008134: transcription factor binding	3.96E-02
106	GO:0043621: protein self-association	4.22E-02
107	GO:0043424: protein histidine kinase binding	4.25E-02
108	GO:0005345: purine nucleobase transmembrane transporter activity	4.25E-02
109	GO:0033612: receptor serine/threonine kinase binding	4.55E-02
110	GO:0003964: RNA-directed DNA polymerase activity	4.55E-02
111	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0000408: EKC/KEOPS complex	0.00E+00
3	GO:0009537: proplastid	0.00E+00
4	GO:0009986: cell surface	8.45E-04
5	GO:0009507: chloroplast	1.26E-03
6	GO:0009513: etioplast	1.51E-03
7	GO:0016605: PML body	2.49E-03
8	GO:0009509: chromoplast	2.49E-03
9	GO:0030139: endocytic vesicle	2.49E-03
10	GO:0030529: intracellular ribonucleoprotein complex	3.11E-03
11	GO:0032585: multivesicular body membrane	3.63E-03
12	GO:0032432: actin filament bundle	3.63E-03
13	GO:0009331: glycerol-3-phosphate dehydrogenase complex	3.63E-03
14	GO:0009707: chloroplast outer membrane	4.38E-03
15	GO:0005871: kinesin complex	8.68E-03
16	GO:0031305: integral component of mitochondrial inner membrane	1.31E-02
17	GO:0009501: amyloplast	1.31E-02
18	GO:0046658: anchored component of plasma membrane	1.57E-02
19	GO:0016604: nuclear body	1.93E-02
20	GO:0005884: actin filament	2.39E-02
21	GO:0005578: proteinaceous extracellular matrix	2.88E-02
22	GO:0009574: preprophase band	2.88E-02
23	GO:0016602: CCAAT-binding factor complex	2.88E-02
24	GO:0030095: chloroplast photosystem II	3.14E-02
25	GO:0005886: plasma membrane	3.58E-02
26	GO:0005875: microtubule associated complex	3.68E-02
27	GO:0009654: photosystem II oxygen evolving complex	4.25E-02
28	GO:0005856: cytoskeleton	4.38E-02
29	GO:0009532: plastid stroma	4.55E-02