co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G19090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
2	GO:0006437: tyrosyl-tRNA aminoacylation	0.00E+00
3	GO:0019685: photosynthesis, dark reaction	0.00E+00
4	GO:0045014: negative regulation of transcription by glucose	0.00E+00
5	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.66E-05
6	GO:0009926: auxin polar transport	5.56E-05
7	GO:0032958: inositol phosphate biosynthetic process	1.73E-04
8	GO:0043609: regulation of carbon utilization	1.73E-04
9	GO:0051013: microtubule severing	1.73E-04
10	GO:0009733: response to auxin	3.50E-04
11	GO:0061062: regulation of nematode larval development	3.92E-04
12	GO:0001736: establishment of planar polarity	3.92E-04
13	GO:0043039: tRNA aminoacylation	3.92E-04
14	GO:0009825: multidimensional cell growth	5.46E-04
15	GO:0010226: response to lithium ion	6.40E-04
16	GO:0006000: fructose metabolic process	6.40E-04
17	GO:0009734: auxin-activated signaling pathway	7.90E-04
18	GO:2001141: regulation of RNA biosynthetic process	9.13E-04
19	GO:0006020: inositol metabolic process	9.13E-04
20	GO:0051639: actin filament network formation	9.13E-04
21	GO:0007276: gamete generation	9.13E-04
22	GO:0042127: regulation of cell proliferation	1.04E-03
23	GO:0042991: transcription factor import into nucleus	1.21E-03
24	GO:0006021: inositol biosynthetic process	1.21E-03
25	GO:0009956: radial pattern formation	1.21E-03
26	GO:0051764: actin crosslink formation	1.21E-03
27	GO:0009624: response to nematode	1.36E-03
28	GO:0010583: response to cyclopentenone	1.70E-03
29	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.89E-03
30	GO:0009942: longitudinal axis specification	2.27E-03
31	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	2.27E-03
32	GO:0048444: floral organ morphogenesis	2.27E-03
33	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	2.27E-03
34	GO:0000082: G1/S transition of mitotic cell cycle	2.67E-03
35	GO:0010444: guard mother cell differentiation	2.67E-03
36	GO:0009610: response to symbiotic fungus	2.67E-03
37	GO:0046620: regulation of organ growth	3.09E-03
38	GO:0010492: maintenance of shoot apical meristem identity	3.09E-03
39	GO:0000105: histidine biosynthetic process	3.09E-03
40	GO:0048574: long-day photoperiodism, flowering	3.54E-03
41	GO:0007389: pattern specification process	3.54E-03
42	GO:0009932: cell tip growth	3.54E-03
43	GO:0006002: fructose 6-phosphate metabolic process	3.54E-03
44	GO:0071482: cellular response to light stimulus	3.54E-03
45	GO:0048589: developmental growth	4.00E-03
46	GO:0006782: protoporphyrinogen IX biosynthetic process	4.99E-03
47	GO:0048829: root cap development	4.99E-03
48	GO:0009641: shade avoidance	4.99E-03
49	GO:0008285: negative regulation of cell proliferation	5.52E-03
50	GO:0006352: DNA-templated transcription, initiation	5.52E-03
51	GO:0048765: root hair cell differentiation	5.52E-03
52	GO:0010152: pollen maturation	6.06E-03
53	GO:0006790: sulfur compound metabolic process	6.06E-03
54	GO:0009736: cytokinin-activated signaling pathway	6.55E-03
55	GO:0009933: meristem structural organization	7.20E-03
56	GO:0010207: photosystem II assembly	7.20E-03
57	GO:0009887: animal organ morphogenesis	7.20E-03
58	GO:0010540: basipetal auxin transport	7.20E-03
59	GO:0009934: regulation of meristem structural organization	7.20E-03
60	GO:0046854: phosphatidylinositol phosphorylation	7.79E-03
61	GO:0010053: root epidermal cell differentiation	7.79E-03
62	GO:0007010: cytoskeleton organization	9.03E-03
63	GO:0051017: actin filament bundle assembly	9.03E-03
64	GO:0006468: protein phosphorylation	9.19E-03
65	GO:0043622: cortical microtubule organization	9.69E-03
66	GO:0051302: regulation of cell division	9.69E-03
67	GO:0006418: tRNA aminoacylation for protein translation	9.69E-03
68	GO:0051726: regulation of cell cycle	9.89E-03
69	GO:0003333: amino acid transmembrane transport	1.03E-02
70	GO:0048364: root development	1.07E-02
71	GO:0006284: base-excision repair	1.24E-02
72	GO:0010091: trichome branching	1.24E-02
73	GO:0048443: stamen development	1.24E-02
74	GO:0000271: polysaccharide biosynthetic process	1.39E-02
75	GO:0000226: microtubule cytoskeleton organization	1.39E-02
76	GO:0010305: leaf vascular tissue pattern formation	1.47E-02
77	GO:0009958: positive gravitropism	1.47E-02
78	GO:0009741: response to brassinosteroid	1.47E-02
79	GO:0045489: pectin biosynthetic process	1.47E-02
80	GO:0007018: microtubule-based movement	1.54E-02
81	GO:0040008: regulation of growth	1.54E-02
82	GO:0048825: cotyledon development	1.62E-02
83	GO:0045490: pectin catabolic process	1.62E-02
84	GO:0071554: cell wall organization or biogenesis	1.70E-02
85	GO:0009793: embryo development ending in seed dormancy	1.74E-02
86	GO:0032502: developmental process	1.78E-02
87	GO:0010090: trichome morphogenesis	1.87E-02
88	GO:0010252: auxin homeostasis	1.95E-02
89	GO:0019760: glucosinolate metabolic process	1.95E-02
90	GO:0051301: cell division	2.35E-02
91	GO:0015995: chlorophyll biosynthetic process	2.48E-02
92	GO:0010411: xyloglucan metabolic process	2.48E-02
93	GO:0018298: protein-chromophore linkage	2.67E-02
94	GO:0009817: defense response to fungus, incompatible interaction	2.67E-02
95	GO:0010311: lateral root formation	2.77E-02
96	GO:0009832: plant-type cell wall biogenesis	2.77E-02
97	GO:0000160: phosphorelay signal transduction system	2.77E-02
98	GO:0006499: N-terminal protein myristoylation	2.87E-02
99	GO:0006865: amino acid transport	3.06E-02
100	GO:0016051: carbohydrate biosynthetic process	3.16E-02
101	GO:0030001: metal ion transport	3.47E-02
102	GO:0006839: mitochondrial transport	3.47E-02
103	GO:0009744: response to sucrose	3.79E-02
104	GO:0051707: response to other organism	3.79E-02
105	GO:0042546: cell wall biogenesis	3.90E-02
106	GO:0009965: leaf morphogenesis	4.12E-02
107	GO:0016042: lipid catabolic process	4.44E-02
108	GO:0009664: plant-type cell wall organization	4.45E-02
109	GO:0042538: hyperosmotic salinity response	4.45E-02
110	GO:0006281: DNA repair	4.57E-02

Rank	GO Term	Adjusted P value
1	GO:0004401: histidinol-phosphatase activity	0.00E+00
2	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
3	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
4	GO:0052834: inositol monophosphate phosphatase activity	0.00E+00
5	GO:0010011: auxin binding	2.30E-05
6	GO:0004831: tyrosine-tRNA ligase activity	1.73E-04
7	GO:0008568: microtubule-severing ATPase activity	1.73E-04
8	GO:0033857: diphosphoinositol-pentakisphosphate kinase activity	1.73E-04
9	GO:0010347: L-galactose-1-phosphate phosphatase activity	1.73E-04
10	GO:0000829: inositol heptakisphosphate kinase activity	1.73E-04
11	GO:0000828: inositol hexakisphosphate kinase activity	1.73E-04
12	GO:0052833: inositol monophosphate 4-phosphatase activity	3.92E-04
13	GO:0005094: Rho GDP-dissociation inhibitor activity	3.92E-04
14	GO:0052832: inositol monophosphate 3-phosphatase activity	3.92E-04
15	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	3.92E-04
16	GO:0004109: coproporphyrinogen oxidase activity	3.92E-04
17	GO:0008805: carbon-monoxide oxygenase activity	3.92E-04
18	GO:0008934: inositol monophosphate 1-phosphatase activity	3.92E-04
19	GO:0003913: DNA photolyase activity	6.40E-04
20	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	9.13E-04
21	GO:0030570: pectate lyase activity	9.60E-04
22	GO:0001053: plastid sigma factor activity	1.21E-03
23	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	1.21E-03
24	GO:0016987: sigma factor activity	1.21E-03
25	GO:0010328: auxin influx transmembrane transporter activity	1.21E-03
26	GO:0008725: DNA-3-methyladenine glycosylase activity	1.54E-03
27	GO:2001070: starch binding	1.89E-03
28	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.27E-03
29	GO:0009881: photoreceptor activity	2.67E-03
30	GO:0008017: microtubule binding	2.87E-03
31	GO:0005096: GTPase activator activity	3.14E-03
32	GO:0009672: auxin:proton symporter activity	4.49E-03
33	GO:0010329: auxin efflux transmembrane transporter activity	6.61E-03
34	GO:0003725: double-stranded RNA binding	6.61E-03
35	GO:0004565: beta-galactosidase activity	6.61E-03
36	GO:0003712: transcription cofactor activity	7.79E-03
37	GO:0004672: protein kinase activity	7.95E-03
38	GO:0004674: protein serine/threonine kinase activity	8.93E-03
39	GO:0003779: actin binding	9.05E-03
40	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.10E-02
41	GO:0009055: electron carrier activity	1.11E-02
42	GO:0016829: lyase activity	1.27E-02
43	GO:0004812: aminoacyl-tRNA ligase activity	1.32E-02
44	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	1.47E-02
45	GO:0016853: isomerase activity	1.54E-02
46	GO:0019901: protein kinase binding	1.62E-02
47	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.70E-02
48	GO:0000156: phosphorelay response regulator activity	1.87E-02
49	GO:0051015: actin filament binding	1.87E-02
50	GO:0042802: identical protein binding	2.06E-02
51	GO:0016413: O-acetyltransferase activity	2.12E-02
52	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.48E-02
53	GO:0016788: hydrolase activity, acting on ester bonds	2.56E-02
54	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.87E-02
55	GO:0003697: single-stranded DNA binding	3.16E-02
56	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.37E-02
57	GO:0052689: carboxylic ester hydrolase activity	3.43E-02
58	GO:0042803: protein homodimerization activity	3.89E-02
59	GO:0015293: symporter activity	4.12E-02
60	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.68E-02
61	GO:0005515: protein binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009531: secondary cell wall	9.13E-04
3	GO:0032432: actin filament bundle	9.13E-04
4	GO:0005874: microtubule	1.12E-03
5	GO:0009986: cell surface	2.67E-03
6	GO:0005884: actin filament	5.52E-03
7	GO:0005578: proteinaceous extracellular matrix	6.61E-03
8	GO:0005871: kinesin complex	1.32E-02
9	GO:0009505: plant-type cell wall	2.07E-02
10	GO:0046658: anchored component of plasma membrane	2.14E-02
11	GO:0005886: plasma membrane	2.32E-02
12	GO:0009707: chloroplast outer membrane	2.67E-02
13	GO:0031225: anchored component of membrane	3.67E-02