GO Enrichment Analysis of Co-expressed Genes with
AT5G18660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0042254: ribosome biogenesis | 4.17E-09 |
| 3 | GO:0006412: translation | 8.99E-09 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 6.50E-07 |
| 5 | GO:0009735: response to cytokinin | 3.75E-06 |
| 6 | GO:0015979: photosynthesis | 1.30E-04 |
| 7 | GO:0010270: photosystem II oxygen evolving complex assembly | 1.37E-04 |
| 8 | GO:0071484: cellular response to light intensity | 3.41E-04 |
| 9 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.41E-04 |
| 10 | GO:0006241: CTP biosynthetic process | 3.41E-04 |
| 11 | GO:0006165: nucleoside diphosphate phosphorylation | 3.41E-04 |
| 12 | GO:0006228: UTP biosynthetic process | 3.41E-04 |
| 13 | GO:0006183: GTP biosynthetic process | 4.56E-04 |
| 14 | GO:0044206: UMP salvage | 4.56E-04 |
| 15 | GO:0006461: protein complex assembly | 5.78E-04 |
| 16 | GO:0043097: pyrimidine nucleoside salvage | 5.78E-04 |
| 17 | GO:0010190: cytochrome b6f complex assembly | 7.07E-04 |
| 18 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 7.07E-04 |
| 19 | GO:0006014: D-ribose metabolic process | 7.07E-04 |
| 20 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.07E-04 |
| 21 | GO:0006828: manganese ion transport | 7.07E-04 |
| 22 | GO:0006206: pyrimidine nucleobase metabolic process | 7.07E-04 |
| 23 | GO:0006457: protein folding | 7.47E-04 |
| 24 | GO:0042026: protein refolding | 8.44E-04 |
| 25 | GO:0032544: plastid translation | 1.29E-03 |
| 26 | GO:0009657: plastid organization | 1.29E-03 |
| 27 | GO:0010206: photosystem II repair | 1.45E-03 |
| 28 | GO:0006783: heme biosynthetic process | 1.45E-03 |
| 29 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.79E-03 |
| 30 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.97E-03 |
| 31 | GO:0006816: calcium ion transport | 1.97E-03 |
| 32 | GO:0010207: photosystem II assembly | 2.56E-03 |
| 33 | GO:0071732: cellular response to nitric oxide | 2.76E-03 |
| 34 | GO:0051017: actin filament bundle assembly | 3.18E-03 |
| 35 | GO:0009116: nucleoside metabolic process | 3.18E-03 |
| 36 | GO:0000027: ribosomal large subunit assembly | 3.18E-03 |
| 37 | GO:0006633: fatty acid biosynthetic process | 3.23E-03 |
| 38 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.40E-03 |
| 39 | GO:0043622: cortical microtubule organization | 3.40E-03 |
| 40 | GO:0016114: terpenoid biosynthetic process | 3.63E-03 |
| 41 | GO:0061077: chaperone-mediated protein folding | 3.63E-03 |
| 42 | GO:0007005: mitochondrion organization | 3.86E-03 |
| 43 | GO:0035428: hexose transmembrane transport | 3.86E-03 |
| 44 | GO:0009411: response to UV | 4.10E-03 |
| 45 | GO:0071369: cellular response to ethylene stimulus | 4.10E-03 |
| 46 | GO:0006012: galactose metabolic process | 4.10E-03 |
| 47 | GO:0000413: protein peptidyl-prolyl isomerization | 4.83E-03 |
| 48 | GO:0046323: glucose import | 5.09E-03 |
| 49 | GO:0019252: starch biosynthetic process | 5.61E-03 |
| 50 | GO:0000302: response to reactive oxygen species | 5.88E-03 |
| 51 | GO:0032502: developmental process | 6.15E-03 |
| 52 | GO:0071281: cellular response to iron ion | 6.43E-03 |
| 53 | GO:0009627: systemic acquired resistance | 8.19E-03 |
| 54 | GO:0008219: cell death | 9.13E-03 |
| 55 | GO:0006629: lipid metabolic process | 1.00E-02 |
| 56 | GO:0007568: aging | 1.01E-02 |
| 57 | GO:0016051: carbohydrate biosynthetic process | 1.08E-02 |
| 58 | GO:0034599: cellular response to oxidative stress | 1.11E-02 |
| 59 | GO:0042542: response to hydrogen peroxide | 1.25E-02 |
| 60 | GO:0006364: rRNA processing | 1.59E-02 |
| 61 | GO:0009585: red, far-red light phototransduction | 1.59E-02 |
| 62 | GO:0006096: glycolytic process | 1.79E-02 |
| 63 | GO:0009793: embryo development ending in seed dormancy | 2.16E-02 |
| 64 | GO:0042744: hydrogen peroxide catabolic process | 2.63E-02 |
| 65 | GO:0016036: cellular response to phosphate starvation | 2.87E-02 |
| 66 | GO:0055114: oxidation-reduction process | 4.02E-02 |
| 67 | GO:0009409: response to cold | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 3 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 4 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 5 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 6 | GO:0003735: structural constituent of ribosome | 4.01E-11 |
| 7 | GO:0019843: rRNA binding | 2.38E-10 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.17E-09 |
| 9 | GO:0005528: FK506 binding | 2.23E-08 |
| 10 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 5.64E-05 |
| 11 | GO:0004853: uroporphyrinogen decarboxylase activity | 5.64E-05 |
| 12 | GO:0016630: protochlorophyllide reductase activity | 1.37E-04 |
| 13 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.37E-04 |
| 14 | GO:0008967: phosphoglycolate phosphatase activity | 1.37E-04 |
| 15 | GO:0070402: NADPH binding | 2.34E-04 |
| 16 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 2.34E-04 |
| 17 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 2.34E-04 |
| 18 | GO:0004550: nucleoside diphosphate kinase activity | 3.41E-04 |
| 19 | GO:0008097: 5S rRNA binding | 3.41E-04 |
| 20 | GO:0016851: magnesium chelatase activity | 3.41E-04 |
| 21 | GO:0004845: uracil phosphoribosyltransferase activity | 4.56E-04 |
| 22 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 4.56E-04 |
| 23 | GO:0003959: NADPH dehydrogenase activity | 5.78E-04 |
| 24 | GO:0004709: MAP kinase kinase kinase activity | 7.07E-04 |
| 25 | GO:0004130: cytochrome-c peroxidase activity | 7.07E-04 |
| 26 | GO:0004849: uridine kinase activity | 8.44E-04 |
| 27 | GO:0051920: peroxiredoxin activity | 8.44E-04 |
| 28 | GO:0004747: ribokinase activity | 8.44E-04 |
| 29 | GO:0016209: antioxidant activity | 1.13E-03 |
| 30 | GO:0004034: aldose 1-epimerase activity | 1.13E-03 |
| 31 | GO:0004033: aldo-keto reductase (NADP) activity | 1.13E-03 |
| 32 | GO:0008865: fructokinase activity | 1.13E-03 |
| 33 | GO:0047617: acyl-CoA hydrolase activity | 1.62E-03 |
| 34 | GO:0005384: manganese ion transmembrane transporter activity | 1.62E-03 |
| 35 | GO:0044183: protein binding involved in protein folding | 1.97E-03 |
| 36 | GO:0047372: acylglycerol lipase activity | 1.97E-03 |
| 37 | GO:0015095: magnesium ion transmembrane transporter activity | 2.36E-03 |
| 38 | GO:0031409: pigment binding | 2.97E-03 |
| 39 | GO:0005355: glucose transmembrane transporter activity | 5.35E-03 |
| 40 | GO:0016853: isomerase activity | 5.35E-03 |
| 41 | GO:0004601: peroxidase activity | 5.47E-03 |
| 42 | GO:0051015: actin filament binding | 6.43E-03 |
| 43 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 7.00E-03 |
| 44 | GO:0008237: metallopeptidase activity | 7.00E-03 |
| 45 | GO:0016168: chlorophyll binding | 7.89E-03 |
| 46 | GO:0004222: metalloendopeptidase activity | 9.78E-03 |
| 47 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 48 | GO:0015144: carbohydrate transmembrane transporter activity | 2.73E-02 |
| 49 | GO:0005351: sugar:proton symporter activity | 2.97E-02 |
| 50 | GO:0008168: methyltransferase activity | 4.01E-02 |
| 51 | GO:0016788: hydrolase activity, acting on ester bonds | 4.17E-02 |
| 52 | GO:0016491: oxidoreductase activity | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.09E-41 |
| 3 | GO:0009570: chloroplast stroma | 8.22E-33 |
| 4 | GO:0009941: chloroplast envelope | 1.11E-26 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 2.75E-22 |
| 6 | GO:0009579: thylakoid | 8.86E-21 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 7.05E-16 |
| 8 | GO:0009534: chloroplast thylakoid | 3.52E-14 |
| 9 | GO:0031977: thylakoid lumen | 6.38E-14 |
| 10 | GO:0005840: ribosome | 5.96E-10 |
| 11 | GO:0031969: chloroplast membrane | 2.67E-07 |
| 12 | GO:0030095: chloroplast photosystem II | 1.02E-04 |
| 13 | GO:0010007: magnesium chelatase complex | 2.34E-04 |
| 14 | GO:0010319: stromule | 4.79E-04 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 9.85E-04 |
| 16 | GO:0000311: plastid large ribosomal subunit | 2.16E-03 |
| 17 | GO:0030076: light-harvesting complex | 2.76E-03 |
| 18 | GO:0022626: cytosolic ribosome | 2.88E-03 |
| 19 | GO:0015935: small ribosomal subunit | 3.63E-03 |
| 20 | GO:0015629: actin cytoskeleton | 4.10E-03 |
| 21 | GO:0009523: photosystem II | 5.61E-03 |
| 22 | GO:0022625: cytosolic large ribosomal subunit | 7.13E-03 |
| 23 | GO:0009707: chloroplast outer membrane | 9.13E-03 |
| 24 | GO:0009536: plastid | 9.66E-03 |
| 25 | GO:0015934: large ribosomal subunit | 1.01E-02 |
| 26 | GO:0048046: apoplast | 1.03E-02 |
| 27 | GO:0005856: cytoskeleton | 1.40E-02 |
| 28 | GO:0009706: chloroplast inner membrane | 2.04E-02 |
| 29 | GO:0010287: plastoglobule | 2.31E-02 |
| 30 | GO:0005874: microtubule | 4.68E-02 |
| 31 | GO:0016020: membrane | 4.88E-02 |