GO Enrichment Analysis of Co-expressed Genes with
AT5G18640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045176: apical protein localization | 0.00E+00 |
| 2 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 3 | GO:0043972: histone H3-K23 acetylation | 0.00E+00 |
| 4 | GO:0044154: histone H3-K14 acetylation | 0.00E+00 |
| 5 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 6 | GO:2000023: regulation of lateral root development | 0.00E+00 |
| 7 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 1.00E-04 |
| 8 | GO:0010480: microsporocyte differentiation | 2.04E-04 |
| 9 | GO:0034757: negative regulation of iron ion transport | 2.04E-04 |
| 10 | GO:0051171: regulation of nitrogen compound metabolic process | 2.04E-04 |
| 11 | GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic | 2.04E-04 |
| 12 | GO:0043971: histone H3-K18 acetylation | 2.04E-04 |
| 13 | GO:0006898: receptor-mediated endocytosis | 4.57E-04 |
| 14 | GO:0010271: regulation of chlorophyll catabolic process | 4.57E-04 |
| 15 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 4.57E-04 |
| 16 | GO:0006013: mannose metabolic process | 7.44E-04 |
| 17 | GO:0071705: nitrogen compound transport | 7.44E-04 |
| 18 | GO:0080117: secondary growth | 7.44E-04 |
| 19 | GO:0042780: tRNA 3'-end processing | 7.44E-04 |
| 20 | GO:0045493: xylan catabolic process | 7.44E-04 |
| 21 | GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic | 7.44E-04 |
| 22 | GO:0009800: cinnamic acid biosynthetic process | 1.06E-03 |
| 23 | GO:0010255: glucose mediated signaling pathway | 1.06E-03 |
| 24 | GO:0009736: cytokinin-activated signaling pathway | 1.17E-03 |
| 25 | GO:0015846: polyamine transport | 1.41E-03 |
| 26 | GO:0006021: inositol biosynthetic process | 1.41E-03 |
| 27 | GO:0071249: cellular response to nitrate | 1.41E-03 |
| 28 | GO:0048653: anther development | 1.51E-03 |
| 29 | GO:0045489: pectin biosynthetic process | 1.63E-03 |
| 30 | GO:0009416: response to light stimulus | 1.78E-03 |
| 31 | GO:0010583: response to cyclopentenone | 2.14E-03 |
| 32 | GO:0006559: L-phenylalanine catabolic process | 2.21E-03 |
| 33 | GO:0048831: regulation of shoot system development | 2.21E-03 |
| 34 | GO:0048827: phyllome development | 2.21E-03 |
| 35 | GO:0034389: lipid particle organization | 2.66E-03 |
| 36 | GO:0048509: regulation of meristem development | 2.66E-03 |
| 37 | GO:0006401: RNA catabolic process | 3.13E-03 |
| 38 | GO:0009610: response to symbiotic fungus | 3.13E-03 |
| 39 | GO:0048437: floral organ development | 3.13E-03 |
| 40 | GO:0006353: DNA-templated transcription, termination | 3.63E-03 |
| 41 | GO:0000105: histidine biosynthetic process | 3.63E-03 |
| 42 | GO:0007155: cell adhesion | 3.63E-03 |
| 43 | GO:0030244: cellulose biosynthetic process | 3.76E-03 |
| 44 | GO:0009451: RNA modification | 3.76E-03 |
| 45 | GO:0000160: phosphorelay signal transduction system | 3.95E-03 |
| 46 | GO:0032544: plastid translation | 4.15E-03 |
| 47 | GO:0007389: pattern specification process | 4.15E-03 |
| 48 | GO:0044030: regulation of DNA methylation | 4.15E-03 |
| 49 | GO:0006002: fructose 6-phosphate metabolic process | 4.15E-03 |
| 50 | GO:0009827: plant-type cell wall modification | 4.15E-03 |
| 51 | GO:0019432: triglyceride biosynthetic process | 4.70E-03 |
| 52 | GO:0010380: regulation of chlorophyll biosynthetic process | 5.27E-03 |
| 53 | GO:0008202: steroid metabolic process | 5.27E-03 |
| 54 | GO:0006415: translational termination | 6.48E-03 |
| 55 | GO:0048229: gametophyte development | 6.48E-03 |
| 56 | GO:0016485: protein processing | 6.48E-03 |
| 57 | GO:0015706: nitrate transport | 7.12E-03 |
| 58 | GO:0006790: sulfur compound metabolic process | 7.12E-03 |
| 59 | GO:0010229: inflorescence development | 7.78E-03 |
| 60 | GO:0010075: regulation of meristem growth | 7.78E-03 |
| 61 | GO:0006364: rRNA processing | 8.27E-03 |
| 62 | GO:0010540: basipetal auxin transport | 8.47E-03 |
| 63 | GO:0009934: regulation of meristem structural organization | 8.47E-03 |
| 64 | GO:0046854: phosphatidylinositol phosphorylation | 9.17E-03 |
| 65 | GO:0080188: RNA-directed DNA methylation | 9.17E-03 |
| 66 | GO:0010167: response to nitrate | 9.17E-03 |
| 67 | GO:0006863: purine nucleobase transport | 9.90E-03 |
| 68 | GO:0009833: plant-type primary cell wall biogenesis | 9.90E-03 |
| 69 | GO:0006071: glycerol metabolic process | 9.90E-03 |
| 70 | GO:0006338: chromatin remodeling | 1.06E-02 |
| 71 | GO:0010187: negative regulation of seed germination | 1.06E-02 |
| 72 | GO:0006289: nucleotide-excision repair | 1.06E-02 |
| 73 | GO:0043622: cortical microtubule organization | 1.14E-02 |
| 74 | GO:0010073: meristem maintenance | 1.14E-02 |
| 75 | GO:0051726: regulation of cell cycle | 1.25E-02 |
| 76 | GO:0016226: iron-sulfur cluster assembly | 1.30E-02 |
| 77 | GO:0019748: secondary metabolic process | 1.30E-02 |
| 78 | GO:0071215: cellular response to abscisic acid stimulus | 1.38E-02 |
| 79 | GO:0070417: cellular response to cold | 1.55E-02 |
| 80 | GO:0000271: polysaccharide biosynthetic process | 1.64E-02 |
| 81 | GO:0010087: phloem or xylem histogenesis | 1.64E-02 |
| 82 | GO:0048868: pollen tube development | 1.73E-02 |
| 83 | GO:0006633: fatty acid biosynthetic process | 1.86E-02 |
| 84 | GO:0048825: cotyledon development | 1.92E-02 |
| 85 | GO:0080156: mitochondrial mRNA modification | 2.01E-02 |
| 86 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.01E-02 |
| 87 | GO:0071555: cell wall organization | 2.10E-02 |
| 88 | GO:0010252: auxin homeostasis | 2.30E-02 |
| 89 | GO:0009911: positive regulation of flower development | 2.61E-02 |
| 90 | GO:0016126: sterol biosynthetic process | 2.61E-02 |
| 91 | GO:0010029: regulation of seed germination | 2.72E-02 |
| 92 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.72E-02 |
| 93 | GO:0010411: xyloglucan metabolic process | 2.94E-02 |
| 94 | GO:0016049: cell growth | 3.05E-02 |
| 95 | GO:0009658: chloroplast organization | 3.17E-02 |
| 96 | GO:0010311: lateral root formation | 3.27E-02 |
| 97 | GO:0009832: plant-type cell wall biogenesis | 3.27E-02 |
| 98 | GO:0009834: plant-type secondary cell wall biogenesis | 3.38E-02 |
| 99 | GO:0048527: lateral root development | 3.50E-02 |
| 100 | GO:0007568: aging | 3.50E-02 |
| 101 | GO:0009910: negative regulation of flower development | 3.50E-02 |
| 102 | GO:0007049: cell cycle | 3.53E-02 |
| 103 | GO:0016051: carbohydrate biosynthetic process | 3.74E-02 |
| 104 | GO:0009853: photorespiration | 3.74E-02 |
| 105 | GO:0055085: transmembrane transport | 3.79E-02 |
| 106 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.05E-02 |
| 107 | GO:0008283: cell proliferation | 4.47E-02 |
| 108 | GO:0009926: auxin polar transport | 4.47E-02 |
| 109 | GO:0009636: response to toxic substance | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 2 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 3 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 4 | GO:0019808: polyamine binding | 0.00E+00 |
| 5 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 6 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 7 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 8 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 2.04E-04 |
| 9 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.04E-04 |
| 10 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 2.04E-04 |
| 11 | GO:0052833: inositol monophosphate 4-phosphatase activity | 4.57E-04 |
| 12 | GO:0009884: cytokinin receptor activity | 4.57E-04 |
| 13 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 4.57E-04 |
| 14 | GO:0004047: aminomethyltransferase activity | 4.57E-04 |
| 15 | GO:0052832: inositol monophosphate 3-phosphatase activity | 4.57E-04 |
| 16 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 4.57E-04 |
| 17 | GO:0008805: carbon-monoxide oxygenase activity | 4.57E-04 |
| 18 | GO:0008934: inositol monophosphate 1-phosphatase activity | 4.57E-04 |
| 19 | GO:0042781: 3'-tRNA processing endoribonuclease activity | 7.44E-04 |
| 20 | GO:0016805: dipeptidase activity | 7.44E-04 |
| 21 | GO:0005034: osmosensor activity | 7.44E-04 |
| 22 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 7.44E-04 |
| 23 | GO:0045548: phenylalanine ammonia-lyase activity | 7.44E-04 |
| 24 | GO:0000254: C-4 methylsterol oxidase activity | 1.06E-03 |
| 25 | GO:0070628: proteasome binding | 1.41E-03 |
| 26 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.41E-03 |
| 27 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.41E-03 |
| 28 | GO:0010385: double-stranded methylated DNA binding | 1.41E-03 |
| 29 | GO:0005471: ATP:ADP antiporter activity | 1.80E-03 |
| 30 | GO:0019901: protein kinase binding | 1.88E-03 |
| 31 | GO:0031593: polyubiquitin binding | 2.21E-03 |
| 32 | GO:0008237: metallopeptidase activity | 2.58E-03 |
| 33 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.66E-03 |
| 34 | GO:0019900: kinase binding | 2.66E-03 |
| 35 | GO:0004559: alpha-mannosidase activity | 2.66E-03 |
| 36 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 2.66E-03 |
| 37 | GO:0019899: enzyme binding | 3.13E-03 |
| 38 | GO:0003872: 6-phosphofructokinase activity | 3.13E-03 |
| 39 | GO:0004519: endonuclease activity | 3.46E-03 |
| 40 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 4.15E-03 |
| 41 | GO:0008142: oxysterol binding | 4.15E-03 |
| 42 | GO:0003678: DNA helicase activity | 4.70E-03 |
| 43 | GO:0003747: translation release factor activity | 4.70E-03 |
| 44 | GO:0009672: auxin:proton symporter activity | 5.27E-03 |
| 45 | GO:0004673: protein histidine kinase activity | 5.86E-03 |
| 46 | GO:0015020: glucuronosyltransferase activity | 5.86E-03 |
| 47 | GO:0004185: serine-type carboxypeptidase activity | 6.13E-03 |
| 48 | GO:0008327: methyl-CpG binding | 6.48E-03 |
| 49 | GO:0043621: protein self-association | 6.63E-03 |
| 50 | GO:0010329: auxin efflux transmembrane transporter activity | 7.78E-03 |
| 51 | GO:0000155: phosphorelay sensor kinase activity | 7.78E-03 |
| 52 | GO:0000175: 3'-5'-exoribonuclease activity | 7.78E-03 |
| 53 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.47E-03 |
| 54 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 9.90E-03 |
| 55 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 9.90E-03 |
| 56 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 9.90E-03 |
| 57 | GO:0043130: ubiquitin binding | 1.06E-02 |
| 58 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.08E-02 |
| 59 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.08E-02 |
| 60 | GO:0004871: signal transducer activity | 1.11E-02 |
| 61 | GO:0043424: protein histidine kinase binding | 1.14E-02 |
| 62 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.14E-02 |
| 63 | GO:0033612: receptor serine/threonine kinase binding | 1.22E-02 |
| 64 | GO:0004540: ribonuclease activity | 1.22E-02 |
| 65 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.30E-02 |
| 66 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.38E-02 |
| 67 | GO:0016758: transferase activity, transferring hexosyl groups | 1.44E-02 |
| 68 | GO:0019843: rRNA binding | 1.48E-02 |
| 69 | GO:0004402: histone acetyltransferase activity | 1.64E-02 |
| 70 | GO:0008536: Ran GTPase binding | 1.73E-02 |
| 71 | GO:0001085: RNA polymerase II transcription factor binding | 1.73E-02 |
| 72 | GO:0000156: phosphorelay response regulator activity | 2.21E-02 |
| 73 | GO:0008194: UDP-glycosyltransferase activity | 2.29E-02 |
| 74 | GO:0016759: cellulose synthase activity | 2.30E-02 |
| 75 | GO:0003684: damaged DNA binding | 2.30E-02 |
| 76 | GO:0016413: O-acetyltransferase activity | 2.51E-02 |
| 77 | GO:0042802: identical protein binding | 2.60E-02 |
| 78 | GO:0003676: nucleic acid binding | 2.67E-02 |
| 79 | GO:0008270: zinc ion binding | 2.80E-02 |
| 80 | GO:0004721: phosphoprotein phosphatase activity | 2.94E-02 |
| 81 | GO:0003677: DNA binding | 3.17E-02 |
| 82 | GO:0003682: chromatin binding | 3.35E-02 |
| 83 | GO:0004222: metalloendopeptidase activity | 3.38E-02 |
| 84 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.50E-02 |
| 85 | GO:0004672: protein kinase activity | 3.69E-02 |
| 86 | GO:0046872: metal ion binding | 3.87E-02 |
| 87 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.98E-02 |
| 88 | GO:0042393: histone binding | 4.10E-02 |
| 89 | GO:0035091: phosphatidylinositol binding | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042597: periplasmic space | 0.00E+00 |
| 2 | GO:0010370: perinucleolar chromocenter | 2.04E-04 |
| 3 | GO:0010330: cellulose synthase complex | 7.44E-04 |
| 4 | GO:0009505: plant-type cell wall | 7.66E-04 |
| 5 | GO:0000178: exosome (RNase complex) | 1.80E-03 |
| 6 | GO:0005945: 6-phosphofructokinase complex | 1.80E-03 |
| 7 | GO:0009507: chloroplast | 2.05E-03 |
| 8 | GO:0010005: cortical microtubule, transverse to long axis | 2.66E-03 |
| 9 | GO:0031982: vesicle | 3.63E-03 |
| 10 | GO:0005811: lipid particle | 4.15E-03 |
| 11 | GO:0005720: nuclear heterochromatin | 4.70E-03 |
| 12 | GO:0016602: CCAAT-binding factor complex | 7.78E-03 |
| 13 | GO:0045271: respiratory chain complex I | 1.14E-02 |
| 14 | GO:0043231: intracellular membrane-bounded organelle | 1.55E-02 |
| 15 | GO:0005770: late endosome | 1.73E-02 |
| 16 | GO:0000932: P-body | 2.61E-02 |
| 17 | GO:0005667: transcription factor complex | 2.83E-02 |
| 18 | GO:0005789: endoplasmic reticulum membrane | 3.91E-02 |
| 19 | GO:0005819: spindle | 3.98E-02 |
| 20 | GO:0005886: plasma membrane | 4.12E-02 |