co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G18260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0043972: histone H3-K23 acetylation	0.00E+00
3	GO:0044154: histone H3-K14 acetylation	0.00E+00
4	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	6.70E-05
5	GO:0051171: regulation of nitrogen compound metabolic process	1.58E-04
6	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	1.58E-04
7	GO:0043971: histone H3-K18 acetylation	1.58E-04
8	GO:0009416: response to light stimulus	1.92E-04
9	GO:0048255: mRNA stabilization	3.60E-04
10	GO:0006898: receptor-mediated endocytosis	3.60E-04
11	GO:0080175: phragmoplast microtubule organization	3.60E-04
12	GO:0010540: basipetal auxin transport	4.31E-04
13	GO:0042780: tRNA 3'-end processing	5.89E-04
14	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	5.89E-04
15	GO:0006013: mannose metabolic process	5.89E-04
16	GO:0009800: cinnamic acid biosynthetic process	8.43E-04
17	GO:0010255: glucose mediated signaling pathway	8.43E-04
18	GO:1902290: positive regulation of defense response to oomycetes	8.43E-04
19	GO:0015846: polyamine transport	1.12E-03
20	GO:0009956: radial pattern formation	1.12E-03
21	GO:0051225: spindle assembly	1.41E-03
22	GO:0048827: phyllome development	1.74E-03
23	GO:0006559: L-phenylalanine catabolic process	1.74E-03
24	GO:0007623: circadian rhythm	2.31E-03
25	GO:0006401: RNA catabolic process	2.45E-03
26	GO:0009610: response to symbiotic fungus	2.45E-03
27	GO:0019745: pentacyclic triterpenoid biosynthetic process	2.45E-03
28	GO:0034968: histone lysine methylation	2.84E-03
29	GO:0010052: guard cell differentiation	3.25E-03
30	GO:0007389: pattern specification process	3.25E-03
31	GO:0044030: regulation of DNA methylation	3.25E-03
32	GO:0016571: histone methylation	4.12E-03
33	GO:0008202: steroid metabolic process	4.12E-03
34	GO:1900426: positive regulation of defense response to bacterium	4.12E-03
35	GO:0010380: regulation of chlorophyll biosynthetic process	4.12E-03
36	GO:0009926: auxin polar transport	4.29E-03
37	GO:0016485: protein processing	5.05E-03
38	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.51E-03
39	GO:0010229: inflorescence development	6.06E-03
40	GO:0009718: anthocyanin-containing compound biosynthetic process	6.06E-03
41	GO:0009933: meristem structural organization	6.59E-03
42	GO:0009825: multidimensional cell growth	7.13E-03
43	GO:0080188: RNA-directed DNA methylation	7.13E-03
44	GO:0016567: protein ubiquitination	7.46E-03
45	GO:0006863: purine nucleobase transport	7.69E-03
46	GO:0080147: root hair cell development	8.27E-03
47	GO:0007010: cytoskeleton organization	8.27E-03
48	GO:0010187: negative regulation of seed germination	8.27E-03
49	GO:0051726: regulation of cell cycle	8.71E-03
50	GO:0016226: iron-sulfur cluster assembly	1.01E-02
51	GO:0019748: secondary metabolic process	1.01E-02
52	GO:0009693: ethylene biosynthetic process	1.07E-02
53	GO:0006284: base-excision repair	1.14E-02
54	GO:0000271: polysaccharide biosynthetic process	1.27E-02
55	GO:0010051: xylem and phloem pattern formation	1.27E-02
56	GO:0048653: anther development	1.27E-02
57	GO:0009958: positive gravitropism	1.34E-02
58	GO:0009734: auxin-activated signaling pathway	1.34E-02
59	GO:0048868: pollen tube development	1.34E-02
60	GO:0045489: pectin biosynthetic process	1.34E-02
61	GO:0010305: leaf vascular tissue pattern formation	1.34E-02
62	GO:0048825: cotyledon development	1.48E-02
63	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.56E-02
64	GO:0002229: defense response to oomycetes	1.56E-02
65	GO:0007166: cell surface receptor signaling pathway	1.63E-02
66	GO:0009630: gravitropism	1.63E-02
67	GO:0006468: protein phosphorylation	1.77E-02
68	GO:0010252: auxin homeostasis	1.78E-02
69	GO:0051301: cell division	2.00E-02
70	GO:0010027: thylakoid membrane organization	2.02E-02
71	GO:0009911: positive regulation of flower development	2.02E-02
72	GO:0009658: chloroplast organization	2.21E-02
73	GO:0006355: regulation of transcription, DNA-templated	2.34E-02
74	GO:0008219: cell death	2.44E-02
75	GO:0007049: cell cycle	2.47E-02
76	GO:0006457: protein folding	2.48E-02
77	GO:0009832: plant-type cell wall biogenesis	2.53E-02
78	GO:0007568: aging	2.71E-02
79	GO:0009910: negative regulation of flower development	2.71E-02
80	GO:0016051: carbohydrate biosynthetic process	2.89E-02
81	GO:0009853: photorespiration	2.89E-02
82	GO:0051707: response to other organism	3.46E-02
83	GO:0009965: leaf morphogenesis	3.76E-02
84	GO:0031347: regulation of defense response	3.96E-02
85	GO:0006629: lipid metabolic process	4.03E-02
86	GO:0048364: root development	4.21E-02
87	GO:0006364: rRNA processing	4.28E-02
88	GO:0071555: cell wall organization	4.32E-02
89	GO:0051603: proteolysis involved in cellular protein catabolic process	4.38E-02
90	GO:0008152: metabolic process	4.44E-02
91	GO:0006351: transcription, DNA-templated	4.48E-02

Rank	GO Term	Adjusted P value
1	GO:0019808: polyamine binding	0.00E+00
2	GO:0033947: mannosylglycoprotein endo-beta-mannosidase activity	0.00E+00
3	GO:0008859: exoribonuclease II activity	0.00E+00
4	GO:0016871: cycloartenol synthase activity	0.00E+00
5	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	1.58E-04
6	GO:0017091: AU-rich element binding	1.58E-04
7	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	1.58E-04
8	GO:0004871: signal transducer activity	2.50E-04
9	GO:0008327: methyl-CpG binding	2.91E-04
10	GO:0004047: aminomethyltransferase activity	3.60E-04
11	GO:0008805: carbon-monoxide oxygenase activity	3.60E-04
12	GO:0010429: methyl-CpNpN binding	5.89E-04
13	GO:0045548: phenylalanine ammonia-lyase activity	5.89E-04
14	GO:0010428: methyl-CpNpG binding	5.89E-04
15	GO:0042781: 3'-tRNA processing endoribonuclease activity	5.89E-04
16	GO:0010385: double-stranded methylated DNA binding	1.12E-03
17	GO:0019901: protein kinase binding	1.32E-03
18	GO:0008725: DNA-3-methyladenine glycosylase activity	1.41E-03
19	GO:0004559: alpha-mannosidase activity	2.09E-03
20	GO:0019899: enzyme binding	2.45E-03
21	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	2.90E-03
22	GO:0008142: oxysterol binding	3.25E-03
23	GO:0042393: histone binding	3.80E-03
24	GO:0009672: auxin:proton symporter activity	4.12E-03
25	GO:0004185: serine-type carboxypeptidase activity	4.29E-03
26	GO:0015020: glucuronosyltransferase activity	4.58E-03
27	GO:0004713: protein tyrosine kinase activity	4.58E-03
28	GO:0000175: 3'-5'-exoribonuclease activity	6.06E-03
29	GO:0010329: auxin efflux transmembrane transporter activity	6.06E-03
30	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.59E-03
31	GO:0080043: quercetin 3-O-glucosyltransferase activity	7.50E-03
32	GO:0080044: quercetin 7-O-glucosyltransferase activity	7.50E-03
33	GO:0016301: kinase activity	7.59E-03
34	GO:0005345: purine nucleobase transmembrane transporter activity	8.86E-03
35	GO:0004540: ribonuclease activity	9.46E-03
36	GO:0016758: transferase activity, transferring hexosyl groups	1.00E-02
37	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.01E-02
38	GO:0018024: histone-lysine N-methyltransferase activity	1.20E-02
39	GO:0004402: histone acetyltransferase activity	1.27E-02
40	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.33E-02
41	GO:0001085: RNA polymerase II transcription factor binding	1.34E-02
42	GO:0008017: microtubule binding	1.49E-02
43	GO:0008194: UDP-glycosyltransferase activity	1.59E-02
44	GO:0003677: DNA binding	1.82E-02
45	GO:0008237: metallopeptidase activity	1.86E-02
46	GO:0046983: protein dimerization activity	1.89E-02
47	GO:0004674: protein serine/threonine kinase activity	1.89E-02
48	GO:0004672: protein kinase activity	2.17E-02
49	GO:0004721: phosphoprotein phosphatase activity	2.27E-02
50	GO:0004806: triglyceride lipase activity	2.27E-02
51	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.54E-02
52	GO:0004222: metalloendopeptidase activity	2.62E-02
53	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.71E-02
54	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.08E-02
55	GO:0043621: protein self-association	3.66E-02
56	GO:0035091: phosphatidylinositol binding	3.66E-02
57	GO:0016298: lipase activity	4.38E-02
58	GO:0003777: microtubule motor activity	4.60E-02
59	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0010370: perinucleolar chromocenter	1.58E-04
3	GO:0005819: spindle	4.18E-04
4	GO:0070652: HAUS complex	5.89E-04
5	GO:0000178: exosome (RNase complex)	1.41E-03
6	GO:0010005: cortical microtubule, transverse to long axis	2.09E-03
7	GO:0031982: vesicle	2.84E-03
8	GO:0008180: COP9 signalosome	3.67E-03
9	GO:0005720: nuclear heterochromatin	3.67E-03
10	GO:0016602: CCAAT-binding factor complex	6.06E-03
11	GO:0005886: plasma membrane	7.39E-03
12	GO:0045271: respiratory chain complex I	8.86E-03
13	GO:0000775: chromosome, centromeric region	1.01E-02
14	GO:0009524: phragmoplast	1.09E-02
15	GO:0005770: late endosome	1.34E-02
16	GO:0071944: cell periphery	1.71E-02
17	GO:0009505: plant-type cell wall	1.72E-02
18	GO:0046658: anchored component of plasma membrane	1.89E-02
19	GO:0000932: P-body	2.02E-02
20	GO:0005667: transcription factor complex	2.19E-02
21	GO:0019005: SCF ubiquitin ligase complex	2.44E-02
22	GO:0005874: microtubule	2.65E-02
23	GO:0031225: anchored component of membrane	3.13E-02
24	GO:0031966: mitochondrial membrane	4.07E-02
25	GO:0000502: proteasome complex	4.28E-02
26	GO:0043231: intracellular membrane-bounded organelle	4.44E-02
27	GO:0005747: mitochondrial respiratory chain complex I	4.93E-02