co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G17660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042821: pyridoxal biosynthetic process	0.00E+00
2	GO:0090279: regulation of calcium ion import	0.00E+00
3	GO:0006114: glycerol biosynthetic process	0.00E+00
4	GO:0042820: vitamin B6 catabolic process	0.00E+00
5	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
6	GO:1905177: tracheary element differentiation	0.00E+00
7	GO:0008298: intracellular mRNA localization	0.00E+00
8	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
9	GO:0071474: cellular hyperosmotic response	0.00E+00
10	GO:0006399: tRNA metabolic process	0.00E+00
11	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
12	GO:0070979: protein K11-linked ubiquitination	0.00E+00
13	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
14	GO:0030155: regulation of cell adhesion	0.00E+00
15	GO:2001141: regulation of RNA biosynthetic process	7.18E-08
16	GO:1902326: positive regulation of chlorophyll biosynthetic process	2.46E-06
17	GO:0071482: cellular response to light stimulus	5.89E-06
18	GO:0005977: glycogen metabolic process	8.95E-06
19	GO:0006352: DNA-templated transcription, initiation	1.90E-05
20	GO:0010021: amylopectin biosynthetic process	3.72E-05
21	GO:0015995: chlorophyll biosynthetic process	3.77E-05
22	GO:0045038: protein import into chloroplast thylakoid membrane	5.95E-05
23	GO:0015979: photosynthesis	9.51E-05
24	GO:0009443: pyridoxal 5'-phosphate salvage	2.29E-04
25	GO:0031426: polycistronic mRNA processing	2.29E-04
26	GO:0051775: response to redox state	2.29E-04
27	GO:0043266: regulation of potassium ion transport	2.29E-04
28	GO:0000481: maturation of 5S rRNA	2.29E-04
29	GO:0042371: vitamin K biosynthetic process	2.29E-04
30	GO:0071461: cellular response to redox state	2.29E-04
31	GO:2000021: regulation of ion homeostasis	2.29E-04
32	GO:0034337: RNA folding	2.29E-04
33	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	2.29E-04
34	GO:0032544: plastid translation	2.51E-04
35	GO:0048507: meristem development	3.04E-04
36	GO:0019684: photosynthesis, light reaction	4.90E-04
37	GO:0043085: positive regulation of catalytic activity	4.90E-04
38	GO:0060359: response to ammonium ion	5.10E-04
39	GO:0080005: photosystem stoichiometry adjustment	5.10E-04
40	GO:0010541: acropetal auxin transport	5.10E-04
41	GO:0010024: phytochromobilin biosynthetic process	5.10E-04
42	GO:0051262: protein tetramerization	5.10E-04
43	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.10E-04
44	GO:0009767: photosynthetic electron transport chain	6.36E-04
45	GO:0010207: photosystem II assembly	7.15E-04
46	GO:0006788: heme oxidation	8.29E-04
47	GO:0006954: inflammatory response	8.29E-04
48	GO:0010160: formation of animal organ boundary	8.29E-04
49	GO:0031145: anaphase-promoting complex-dependent catabolic process	8.29E-04
50	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	8.29E-04
51	GO:0010623: programmed cell death involved in cell development	8.29E-04
52	GO:0006696: ergosterol biosynthetic process	8.29E-04
53	GO:0043157: response to cation stress	8.29E-04
54	GO:0048281: inflorescence morphogenesis	8.29E-04
55	GO:0007017: microtubule-based process	1.08E-03
56	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.18E-03
57	GO:0051016: barbed-end actin filament capping	1.18E-03
58	GO:0009226: nucleotide-sugar biosynthetic process	1.18E-03
59	GO:0010148: transpiration	1.18E-03
60	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.18E-03
61	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.18E-03
62	GO:0006107: oxaloacetate metabolic process	1.18E-03
63	GO:0010239: chloroplast mRNA processing	1.18E-03
64	GO:0009658: chloroplast organization	1.56E-03
65	GO:2000122: negative regulation of stomatal complex development	1.57E-03
66	GO:0031122: cytoplasmic microtubule organization	1.57E-03
67	GO:0010508: positive regulation of autophagy	1.57E-03
68	GO:0006546: glycine catabolic process	1.57E-03
69	GO:0006734: NADH metabolic process	1.57E-03
70	GO:0006661: phosphatidylinositol biosynthetic process	1.57E-03
71	GO:0009765: photosynthesis, light harvesting	1.57E-03
72	GO:0006109: regulation of carbohydrate metabolic process	1.57E-03
73	GO:0016117: carotenoid biosynthetic process	1.65E-03
74	GO:0080110: sporopollenin biosynthetic process	2.01E-03
75	GO:0009107: lipoate biosynthetic process	2.01E-03
76	GO:0016123: xanthophyll biosynthetic process	2.01E-03
77	GO:0032876: negative regulation of DNA endoreduplication	2.01E-03
78	GO:0010375: stomatal complex patterning	2.01E-03
79	GO:0019252: starch biosynthetic process	2.21E-03
80	GO:0008654: phospholipid biosynthetic process	2.21E-03
81	GO:0060918: auxin transport	2.48E-03
82	GO:0032973: amino acid export	2.48E-03
83	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.48E-03
84	GO:0050665: hydrogen peroxide biosynthetic process	2.48E-03
85	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	2.48E-03
86	GO:0009959: negative gravitropism	2.48E-03
87	GO:0032502: developmental process	2.52E-03
88	GO:0010189: vitamin E biosynthetic process	2.97E-03
89	GO:0009854: oxidative photosynthetic carbon pathway	2.97E-03
90	GO:0010019: chloroplast-nucleus signaling pathway	2.97E-03
91	GO:0010027: thylakoid membrane organization	3.41E-03
92	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.50E-03
93	GO:0070370: cellular heat acclimation	3.50E-03
94	GO:0010103: stomatal complex morphogenesis	3.50E-03
95	GO:0010374: stomatal complex development	3.50E-03
96	GO:0009395: phospholipid catabolic process	3.50E-03
97	GO:0043090: amino acid import	3.50E-03
98	GO:0051693: actin filament capping	3.50E-03
99	GO:0042255: ribosome assembly	4.06E-03
100	GO:0006353: DNA-templated transcription, termination	4.06E-03
101	GO:0009690: cytokinin metabolic process	4.06E-03
102	GO:0006605: protein targeting	4.06E-03
103	GO:0032875: regulation of DNA endoreduplication	4.06E-03
104	GO:0032508: DNA duplex unwinding	4.06E-03
105	GO:0010492: maintenance of shoot apical meristem identity	4.06E-03
106	GO:0007155: cell adhesion	4.06E-03
107	GO:0048564: photosystem I assembly	4.06E-03
108	GO:0016311: dephosphorylation	4.22E-03
109	GO:0018298: protein-chromophore linkage	4.44E-03
110	GO:0001558: regulation of cell growth	4.65E-03
111	GO:0010052: guard cell differentiation	4.65E-03
112	GO:0010204: defense response signaling pathway, resistance gene-independent	4.65E-03
113	GO:0017004: cytochrome complex assembly	4.65E-03
114	GO:0010206: photosystem II repair	5.27E-03
115	GO:0080144: amino acid homeostasis	5.27E-03
116	GO:0006754: ATP biosynthetic process	5.27E-03
117	GO:0009051: pentose-phosphate shunt, oxidative branch	5.27E-03
118	GO:0005975: carbohydrate metabolic process	5.43E-03
119	GO:0009637: response to blue light	5.62E-03
120	GO:0019538: protein metabolic process	6.58E-03
121	GO:0009089: lysine biosynthetic process via diaminopimelate	7.28E-03
122	GO:0008361: regulation of cell size	8.00E-03
123	GO:0006108: malate metabolic process	8.75E-03
124	GO:0030036: actin cytoskeleton organization	8.75E-03
125	GO:0009718: anthocyanin-containing compound biosynthetic process	8.75E-03
126	GO:0042538: hyperosmotic salinity response	9.11E-03
127	GO:0007015: actin filament organization	9.52E-03
128	GO:0010540: basipetal auxin transport	9.52E-03
129	GO:0055114: oxidation-reduction process	1.01E-02
130	GO:0043086: negative regulation of catalytic activity	1.16E-02
131	GO:0006096: glycolytic process	1.16E-02
132	GO:0009944: polarity specification of adaxial/abaxial axis	1.20E-02
133	GO:0051302: regulation of cell division	1.28E-02
134	GO:0008299: isoprenoid biosynthetic process	1.28E-02
135	GO:0055085: transmembrane transport	1.34E-02
136	GO:0010431: seed maturation	1.37E-02
137	GO:0006730: one-carbon metabolic process	1.46E-02
138	GO:0009686: gibberellin biosynthetic process	1.56E-02
139	GO:0001944: vasculature development	1.56E-02
140	GO:0048443: stamen development	1.65E-02
141	GO:0019722: calcium-mediated signaling	1.65E-02
142	GO:0009306: protein secretion	1.65E-02
143	GO:0010089: xylem development	1.65E-02
144	GO:0010584: pollen exine formation	1.65E-02
145	GO:0006629: lipid metabolic process	1.70E-02
146	GO:0008033: tRNA processing	1.85E-02
147	GO:0010087: phloem or xylem histogenesis	1.85E-02
148	GO:0009958: positive gravitropism	1.95E-02
149	GO:0045489: pectin biosynthetic process	1.95E-02
150	GO:0006662: glycerol ether metabolic process	1.95E-02
151	GO:0048868: pollen tube development	1.95E-02
152	GO:0010268: brassinosteroid homeostasis	1.95E-02
153	GO:0009791: post-embryonic development	2.16E-02
154	GO:0016132: brassinosteroid biosynthetic process	2.27E-02
155	GO:0010583: response to cyclopentenone	2.37E-02
156	GO:0009630: gravitropism	2.37E-02
157	GO:0009639: response to red or far red light	2.60E-02
158	GO:0016125: sterol metabolic process	2.60E-02
159	GO:0007267: cell-cell signaling	2.71E-02
160	GO:0008380: RNA splicing	2.89E-02
161	GO:0016126: sterol biosynthetic process	2.94E-02
162	GO:0009416: response to light stimulus	3.48E-02
163	GO:0010218: response to far red light	3.81E-02
164	GO:0048527: lateral root development	3.94E-02
165	GO:0034599: cellular response to oxidative stress	4.34E-02
166	GO:0006099: tricarboxylic acid cycle	4.34E-02
167	GO:0006839: mitochondrial transport	4.62E-02
168	GO:0080167: response to karrikin	4.62E-02
169	GO:0006810: transport	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
3	GO:0010276: phytol kinase activity	0.00E+00
4	GO:0046905: phytoene synthase activity	0.00E+00
5	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
6	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
7	GO:0005048: signal sequence binding	0.00E+00
8	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
9	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
10	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
11	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
12	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
13	GO:0001053: plastid sigma factor activity	2.10E-07
14	GO:0016987: sigma factor activity	2.10E-07
15	GO:0019156: isoamylase activity	2.46E-06
16	GO:0019899: enzyme binding	2.65E-06
17	GO:0070402: NADPH binding	8.95E-06
18	GO:0043495: protein anchor	3.72E-05
19	GO:0004556: alpha-amylase activity	8.74E-05
20	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	2.29E-04
21	GO:0051777: ent-kaurenoate oxidase activity	2.29E-04
22	GO:0008568: microtubule-severing ATPase activity	2.29E-04
23	GO:0051996: squalene synthase activity	2.29E-04
24	GO:0008746: NAD(P)+ transhydrogenase activity	2.29E-04
25	GO:0004328: formamidase activity	2.29E-04
26	GO:0046906: tetrapyrrole binding	2.29E-04
27	GO:0005227: calcium activated cation channel activity	2.29E-04
28	GO:0004802: transketolase activity	5.10E-04
29	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	5.10E-04
30	GO:0048531: beta-1,3-galactosyltransferase activity	5.10E-04
31	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	5.10E-04
32	GO:0010291: carotene beta-ring hydroxylase activity	5.10E-04
33	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	5.10E-04
34	GO:0004047: aminomethyltransferase activity	5.10E-04
35	GO:0003993: acid phosphatase activity	7.67E-04
36	GO:0016992: lipoate synthase activity	8.29E-04
37	GO:0003924: GTPase activity	8.76E-04
38	GO:0005528: FK506 binding	9.81E-04
39	GO:0048027: mRNA 5'-UTR binding	1.18E-03
40	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.18E-03
41	GO:0016851: magnesium chelatase activity	1.18E-03
42	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.18E-03
43	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	1.18E-03
44	GO:0017057: 6-phosphogluconolactonase activity	1.18E-03
45	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	1.18E-03
46	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	1.18E-03
47	GO:0016491: oxidoreductase activity	1.23E-03
48	GO:0022891: substrate-specific transmembrane transporter activity	1.40E-03
49	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.44E-03
50	GO:0019199: transmembrane receptor protein kinase activity	1.57E-03
51	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	1.57E-03
52	GO:0042277: peptide binding	1.57E-03
53	GO:0004392: heme oxygenase (decyclizing) activity	1.57E-03
54	GO:0008891: glycolate oxidase activity	1.57E-03
55	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.57E-03
56	GO:0004045: aminoacyl-tRNA hydrolase activity	1.57E-03
57	GO:0080032: methyl jasmonate esterase activity	1.57E-03
58	GO:0008374: O-acyltransferase activity	2.01E-03
59	GO:0016615: malate dehydrogenase activity	2.48E-03
60	GO:0008200: ion channel inhibitor activity	2.48E-03
61	GO:0004605: phosphatidate cytidylyltransferase activity	2.48E-03
62	GO:0080030: methyl indole-3-acetate esterase activity	2.48E-03
63	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.97E-03
64	GO:0030060: L-malate dehydrogenase activity	2.97E-03
65	GO:0005261: cation channel activity	2.97E-03
66	GO:0005200: structural constituent of cytoskeleton	3.04E-03
67	GO:0016168: chlorophyll binding	3.60E-03
68	GO:0004033: aldo-keto reductase (NADP) activity	4.06E-03
69	GO:0008312: 7S RNA binding	4.06E-03
70	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	5.27E-03
71	GO:0005525: GTP binding	5.72E-03
72	GO:0030955: potassium ion binding	5.91E-03
73	GO:0004743: pyruvate kinase activity	5.91E-03
74	GO:0042802: identical protein binding	6.12E-03
75	GO:0008047: enzyme activator activity	6.58E-03
76	GO:0016887: ATPase activity	7.63E-03
77	GO:0008378: galactosyltransferase activity	8.00E-03
78	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.46E-03
79	GO:0010329: auxin efflux transmembrane transporter activity	8.75E-03
80	GO:0008081: phosphoric diester hydrolase activity	8.75E-03
81	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.52E-03
82	GO:0003824: catalytic activity	9.66E-03
83	GO:0003690: double-stranded DNA binding	1.01E-02
84	GO:0004857: enzyme inhibitor activity	1.20E-02
85	GO:0003727: single-stranded RNA binding	1.65E-02
86	GO:0047134: protein-disulfide reductase activity	1.75E-02
87	GO:0008080: N-acetyltransferase activity	1.95E-02
88	GO:0010181: FMN binding	2.05E-02
89	GO:0050662: coenzyme binding	2.05E-02
90	GO:0004791: thioredoxin-disulfide reductase activity	2.05E-02
91	GO:0016853: isomerase activity	2.05E-02
92	GO:0048038: quinone binding	2.27E-02
93	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.48E-02
94	GO:0008483: transaminase activity	2.71E-02
95	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.71E-02
96	GO:0008236: serine-type peptidase activity	3.43E-02
97	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.56E-02
98	GO:0016788: hydrolase activity, acting on ester bonds	3.81E-02
99	GO:0004222: metalloendopeptidase activity	3.81E-02
100	GO:0030145: manganese ion binding	3.94E-02
101	GO:0003729: mRNA binding	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	1.07E-24
3	GO:0009535: chloroplast thylakoid membrane	9.89E-09
4	GO:0009570: chloroplast stroma	4.51E-08
5	GO:0080085: signal recognition particle, chloroplast targeting	2.46E-06
6	GO:0009543: chloroplast thylakoid lumen	6.18E-05
7	GO:0031969: chloroplast membrane	6.87E-05
8	GO:0042651: thylakoid membrane	7.18E-05
9	GO:0009941: chloroplast envelope	1.10E-04
10	GO:0009579: thylakoid	1.97E-04
11	GO:0009344: nitrite reductase complex [NAD(P)H]	2.29E-04
12	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.51E-04
13	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.04E-04
14	GO:0008290: F-actin capping protein complex	5.10E-04
15	GO:0010007: magnesium chelatase complex	8.29E-04
16	GO:0031977: thylakoid lumen	8.99E-04
17	GO:0009654: photosystem II oxygen evolving complex	1.08E-03
18	GO:0015630: microtubule cytoskeleton	1.18E-03
19	GO:0046658: anchored component of plasma membrane	1.23E-03
20	GO:0009523: photosystem II	2.21E-03
21	GO:0019898: extrinsic component of membrane	2.21E-03
22	GO:0031225: anchored component of membrane	5.21E-03
23	GO:0042644: chloroplast nucleoid	5.27E-03
24	GO:0045298: tubulin complex	5.27E-03
25	GO:0005680: anaphase-promoting complex	5.27E-03
26	GO:0016604: nuclear body	5.91E-03
27	GO:0032040: small-subunit processome	8.00E-03
28	GO:0030095: chloroplast photosystem II	9.52E-03
29	GO:0030176: integral component of endoplasmic reticulum membrane	1.03E-02
30	GO:0009534: chloroplast thylakoid	1.25E-02
31	GO:0009522: photosystem I	2.05E-02
32	GO:0005773: vacuole	2.45E-02
33	GO:0010319: stromule	2.71E-02
34	GO:0048046: apoplast	2.90E-02
35	GO:0030529: intracellular ribonucleoprotein complex	2.94E-02
36	GO:0005618: cell wall	3.40E-02
37	GO:0009505: plant-type cell wall	3.75E-02
38	GO:0005874: microtubule	4.47E-02