Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G16715

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000819: sister chromatid segregation0.00E+00
2GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
3GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
4GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement0.00E+00
5GO:1903224: regulation of endodermal cell differentiation0.00E+00
6GO:0007638: mechanosensory behavior0.00E+00
7GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
8GO:0080127: fruit septum development0.00E+00
9GO:0045184: establishment of protein localization0.00E+00
10GO:0044774: mitotic DNA integrity checkpoint0.00E+00
11GO:0006907: pinocytosis0.00E+00
12GO:0070125: mitochondrial translational elongation0.00E+00
13GO:0042352: GDP-L-fucose salvage0.00E+00
14GO:0009734: auxin-activated signaling pathway2.50E-06
15GO:0009733: response to auxin1.89E-05
16GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.21E-05
17GO:0046620: regulation of organ growth5.80E-05
18GO:0040008: regulation of growth1.12E-04
19GO:0005983: starch catabolic process2.65E-04
20GO:0048497: maintenance of floral organ identity3.42E-04
21GO:0016123: xanthophyll biosynthetic process3.42E-04
22GO:0016554: cytidine to uridine editing4.78E-04
23GO:0015995: chlorophyll biosynthetic process6.13E-04
24GO:0030488: tRNA methylation6.32E-04
25GO:0042659: regulation of cell fate specification6.78E-04
26GO:0000025: maltose catabolic process6.78E-04
27GO:0010493: Lewis a epitope biosynthetic process6.78E-04
28GO:0070509: calcium ion import6.78E-04
29GO:0090558: plant epidermis development6.78E-04
30GO:0010063: positive regulation of trichoblast fate specification6.78E-04
31GO:0046520: sphingoid biosynthetic process6.78E-04
32GO:0010480: microsporocyte differentiation6.78E-04
33GO:0006426: glycyl-tRNA aminoacylation6.78E-04
34GO:0035987: endodermal cell differentiation6.78E-04
35GO:0015904: tetracycline transport6.78E-04
36GO:0048437: floral organ development8.07E-04
37GO:0006468: protein phosphorylation8.59E-04
38GO:0042127: regulation of cell proliferation1.03E-03
39GO:0016042: lipid catabolic process1.37E-03
40GO:0010305: leaf vascular tissue pattern formation1.39E-03
41GO:1901529: positive regulation of anion channel activity1.46E-03
42GO:0061062: regulation of nematode larval development1.46E-03
43GO:0018026: peptidyl-lysine monomethylation1.46E-03
44GO:0048507: meristem development1.46E-03
45GO:0080009: mRNA methylation1.46E-03
46GO:0009786: regulation of asymmetric cell division1.46E-03
47GO:0031648: protein destabilization1.46E-03
48GO:0001682: tRNA 5'-leader removal1.46E-03
49GO:2000123: positive regulation of stomatal complex development1.46E-03
50GO:0043039: tRNA aminoacylation1.46E-03
51GO:0006779: porphyrin-containing compound biosynthetic process1.73E-03
52GO:1900865: chloroplast RNA modification1.73E-03
53GO:0009790: embryo development1.81E-03
54GO:0010583: response to cyclopentenone1.98E-03
55GO:0006782: protoporphyrinogen IX biosynthetic process2.03E-03
56GO:0048829: root cap development2.03E-03
57GO:0006949: syncytium formation2.03E-03
58GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement2.41E-03
59GO:0033591: response to L-ascorbic acid2.41E-03
60GO:0090708: specification of plant organ axis polarity2.41E-03
61GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process2.41E-03
62GO:0010226: response to lithium ion2.41E-03
63GO:0016045: detection of bacterium2.41E-03
64GO:0030029: actin filament-based process2.41E-03
65GO:0045910: negative regulation of DNA recombination2.41E-03
66GO:0010588: cotyledon vascular tissue pattern formation3.06E-03
67GO:2000012: regulation of auxin polar transport3.06E-03
68GO:0007166: cell surface receptor signaling pathway3.09E-03
69GO:0045892: negative regulation of transcription, DNA-templated3.27E-03
70GO:0010020: chloroplast fission3.46E-03
71GO:0051639: actin filament network formation3.51E-03
72GO:0009647: skotomorphogenesis3.51E-03
73GO:0007276: gamete generation3.51E-03
74GO:0006424: glutamyl-tRNA aminoacylation3.51E-03
75GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.51E-03
76GO:0010071: root meristem specification3.51E-03
77GO:0051513: regulation of monopolar cell growth3.51E-03
78GO:0007231: osmosensory signaling pathway3.51E-03
79GO:0009102: biotin biosynthetic process3.51E-03
80GO:0070588: calcium ion transmembrane transport3.88E-03
81GO:0006833: water transport4.33E-03
82GO:0051764: actin crosslink formation4.74E-03
83GO:0009765: photosynthesis, light harvesting4.74E-03
84GO:0030104: water homeostasis4.74E-03
85GO:0033500: carbohydrate homeostasis4.74E-03
86GO:2000038: regulation of stomatal complex development4.74E-03
87GO:0042991: transcription factor import into nucleus4.74E-03
88GO:0008295: spermidine biosynthetic process4.74E-03
89GO:0051017: actin filament bundle assembly4.81E-03
90GO:0048364: root development5.22E-03
91GO:0019953: sexual reproduction5.32E-03
92GO:0010375: stomatal complex patterning6.09E-03
93GO:0016120: carotene biosynthetic process6.09E-03
94GO:0009107: lipoate biosynthetic process6.09E-03
95GO:0007094: mitotic spindle assembly checkpoint6.09E-03
96GO:0009913: epidermal cell differentiation7.56E-03
97GO:1902456: regulation of stomatal opening7.56E-03
98GO:0042793: transcription from plastid promoter7.56E-03
99GO:0033365: protein localization to organelle7.56E-03
100GO:0003006: developmental process involved in reproduction7.56E-03
101GO:0018258: protein O-linked glycosylation via hydroxyproline7.56E-03
102GO:0010405: arabinogalactan protein metabolic process7.56E-03
103GO:0009640: photomorphogenesis7.75E-03
104GO:0009926: auxin polar transport7.75E-03
105GO:0009744: response to sucrose7.75E-03
106GO:0007275: multicellular organism development8.58E-03
107GO:0008033: tRNA processing8.95E-03
108GO:0042372: phylloquinone biosynthetic process9.15E-03
109GO:0009082: branched-chain amino acid biosynthetic process9.15E-03
110GO:2000033: regulation of seed dormancy process9.15E-03
111GO:0009099: valine biosynthetic process9.15E-03
112GO:2000067: regulation of root morphogenesis9.15E-03
113GO:0009958: positive gravitropism9.67E-03
114GO:0010182: sugar mediated signaling pathway9.67E-03
115GO:0007018: microtubule-based movement1.04E-02
116GO:1900056: negative regulation of leaf senescence1.09E-02
117GO:0030497: fatty acid elongation1.09E-02
118GO:0010098: suspensor development1.09E-02
119GO:0010444: guard mother cell differentiation1.09E-02
120GO:0030307: positive regulation of cell growth1.09E-02
121GO:0000082: G1/S transition of mitotic cell cycle1.09E-02
122GO:0000712: resolution of meiotic recombination intermediates1.09E-02
123GO:0045995: regulation of embryonic development1.09E-02
124GO:0048528: post-embryonic root development1.09E-02
125GO:0048825: cotyledon development1.12E-02
126GO:0009736: cytokinin-activated signaling pathway1.14E-02
127GO:0071554: cell wall organization or biogenesis1.20E-02
128GO:0001522: pseudouridine synthesis1.27E-02
129GO:0010492: maintenance of shoot apical meristem identity1.27E-02
130GO:0055075: potassium ion homeostasis1.27E-02
131GO:0000105: histidine biosynthetic process1.27E-02
132GO:0009231: riboflavin biosynthetic process1.27E-02
133GO:0009793: embryo development ending in seed dormancy1.32E-02
134GO:0009097: isoleucine biosynthetic process1.46E-02
135GO:0006526: arginine biosynthetic process1.46E-02
136GO:0009828: plant-type cell wall loosening1.46E-02
137GO:0048367: shoot system development1.47E-02
138GO:0051865: protein autoubiquitination1.66E-02
139GO:0000373: Group II intron splicing1.66E-02
140GO:0000902: cell morphogenesis1.66E-02
141GO:0009835: fruit ripening1.66E-02
142GO:0010027: thylakoid membrane organization1.74E-02
143GO:0009658: chloroplast organization1.85E-02
144GO:2000280: regulation of root development1.86E-02
145GO:0009098: leucine biosynthetic process1.86E-02
146GO:0016571: histone methylation1.86E-02
147GO:0007346: regulation of mitotic cell cycle1.86E-02
148GO:0016573: histone acetylation1.86E-02
149GO:0010162: seed dormancy process2.08E-02
150GO:0009641: shade avoidance2.08E-02
151GO:0006298: mismatch repair2.08E-02
152GO:0006259: DNA metabolic process2.08E-02
153GO:0031627: telomeric loop formation2.08E-02
154GO:0016311: dephosphorylation2.16E-02
155GO:0048481: plant ovule development2.28E-02
156GO:0006816: calcium ion transport2.31E-02
157GO:0006265: DNA topological change2.31E-02
158GO:0009073: aromatic amino acid family biosynthetic process2.31E-02
159GO:0008285: negative regulation of cell proliferation2.31E-02
160GO:0009750: response to fructose2.31E-02
161GO:0048229: gametophyte development2.31E-02
162GO:0010311: lateral root formation2.39E-02
163GO:0000160: phosphorelay signal transduction system2.39E-02
164GO:0006312: mitotic recombination2.54E-02
165GO:0012501: programmed cell death2.54E-02
166GO:0045037: protein import into chloroplast stroma2.54E-02
167GO:0010582: floral meristem determinacy2.54E-02
168GO:0009910: negative regulation of flower development2.64E-02
169GO:0006865: amino acid transport2.76E-02
170GO:0030048: actin filament-based movement2.79E-02
171GO:0010102: lateral root morphogenesis2.79E-02
172GO:0006006: glucose metabolic process2.79E-02
173GO:0009691: cytokinin biosynthetic process2.79E-02
174GO:0010075: regulation of meristem growth2.79E-02
175GO:0009725: response to hormone2.79E-02
176GO:0048467: gynoecium development3.04E-02
177GO:0007034: vacuolar transport3.04E-02
178GO:0009887: animal organ morphogenesis3.04E-02
179GO:0009266: response to temperature stimulus3.04E-02
180GO:0009934: regulation of meristem structural organization3.04E-02
181GO:0006302: double-strand break repair3.04E-02
182GO:0090351: seedling development3.29E-02
183GO:0000162: tryptophan biosynthetic process3.56E-02
184GO:0006636: unsaturated fatty acid biosynthetic process3.56E-02
185GO:0006863: purine nucleobase transport3.56E-02
186GO:0051707: response to other organism3.72E-02
187GO:0080147: root hair cell development3.83E-02
188GO:0006338: chromatin remodeling3.83E-02
189GO:0007017: microtubule-based process4.11E-02
190GO:0051302: regulation of cell division4.11E-02
191GO:0051321: meiotic cell cycle4.40E-02
192GO:0003333: amino acid transmembrane transport4.40E-02
193GO:0048511: rhythmic process4.40E-02
194GO:0009664: plant-type cell wall organization4.66E-02
195GO:2000022: regulation of jasmonic acid mediated signaling pathway4.69E-02
196GO:0007005: mitochondrion organization4.69E-02
197GO:0010082: regulation of root meristem growth4.98E-02
198GO:0009693: ethylene biosynthetic process4.98E-02
RankGO TermAdjusted P value
1GO:0071633: dihydroceramidase activity0.00E+00
2GO:0050201: fucokinase activity0.00E+00
3GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
4GO:0045435: lycopene epsilon cyclase activity0.00E+00
5GO:0047661: amino-acid racemase activity0.00E+00
6GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
7GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
8GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
9GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity0.00E+00
10GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity0.00E+00
11GO:0047341: fucose-1-phosphate guanylyltransferase activity0.00E+00
12GO:0004076: biotin synthase activity0.00E+00
13GO:0001872: (1->3)-beta-D-glucan binding1.34E-04
14GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity6.78E-04
15GO:0004134: 4-alpha-glucanotransferase activity6.78E-04
16GO:0004818: glutamate-tRNA ligase activity6.78E-04
17GO:0046920: alpha-(1->3)-fucosyltransferase activity6.78E-04
18GO:0050308: sugar-phosphatase activity6.78E-04
19GO:0009374: biotin binding6.78E-04
20GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity6.78E-04
21GO:0019203: carbohydrate phosphatase activity6.78E-04
22GO:0052381: tRNA dimethylallyltransferase activity6.78E-04
23GO:0004160: dihydroxy-acid dehydratase activity6.78E-04
24GO:0004820: glycine-tRNA ligase activity6.78E-04
25GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity6.78E-04
26GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity6.78E-04
27GO:0000170: sphingosine hydroxylase activity6.78E-04
28GO:0050139: nicotinate-N-glucosyltransferase activity6.78E-04
29GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity6.78E-04
30GO:0004176: ATP-dependent peptidase activity7.42E-04
31GO:0052689: carboxylic ester hydrolase activity7.74E-04
32GO:0005524: ATP binding8.98E-04
33GO:0016630: protochlorophyllide reductase activity1.46E-03
34GO:0008805: carbon-monoxide oxygenase activity1.46E-03
35GO:0042284: sphingolipid delta-4 desaturase activity1.46E-03
36GO:0019156: isoamylase activity1.46E-03
37GO:0008493: tetracycline transporter activity1.46E-03
38GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.46E-03
39GO:0017118: lipoyltransferase activity1.46E-03
40GO:0003852: 2-isopropylmalate synthase activity1.46E-03
41GO:0016415: octanoyltransferase activity1.46E-03
42GO:0004766: spermidine synthase activity1.46E-03
43GO:0043621: protein self-association1.71E-03
44GO:0004519: endonuclease activity1.76E-03
45GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.15E-03
46GO:0051015: actin filament binding2.15E-03
47GO:0004180: carboxypeptidase activity2.41E-03
48GO:0003913: DNA photolyase activity2.41E-03
49GO:0016805: dipeptidase activity2.41E-03
50GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.41E-03
51GO:0008237: metallopeptidase activity2.52E-03
52GO:0004674: protein serine/threonine kinase activity2.81E-03
53GO:0005262: calcium channel activity3.06E-03
54GO:0016851: magnesium chelatase activity3.51E-03
55GO:0003916: DNA topoisomerase activity3.51E-03
56GO:0005515: protein binding3.85E-03
57GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed4.74E-03
58GO:0019199: transmembrane receptor protein kinase activity4.74E-03
59GO:0004335: galactokinase activity4.74E-03
60GO:0016279: protein-lysine N-methyltransferase activity4.74E-03
61GO:0016836: hydro-lyase activity4.74E-03
62GO:0016788: hydrolase activity, acting on ester bonds5.45E-03
63GO:0008408: 3'-5' exonuclease activity5.85E-03
64GO:0003989: acetyl-CoA carboxylase activity6.09E-03
65GO:0008725: DNA-3-methyladenine glycosylase activity6.09E-03
66GO:0004526: ribonuclease P activity7.56E-03
67GO:0004709: MAP kinase kinase kinase activity7.56E-03
68GO:0004556: alpha-amylase activity7.56E-03
69GO:0016208: AMP binding7.56E-03
70GO:2001070: starch binding7.56E-03
71GO:0030983: mismatched DNA binding7.56E-03
72GO:1990714: hydroxyproline O-galactosyltransferase activity7.56E-03
73GO:0016832: aldehyde-lyase activity9.15E-03
74GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity9.67E-03
75GO:0001085: RNA polymerase II transcription factor binding9.67E-03
76GO:0009881: photoreceptor activity1.09E-02
77GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity1.27E-02
78GO:0003777: microtubule motor activity1.29E-02
79GO:0000156: phosphorelay response regulator activity1.37E-02
80GO:0008173: RNA methyltransferase activity1.46E-02
81GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.46E-02
82GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water1.46E-02
83GO:0005200: structural constituent of cytoskeleton1.55E-02
84GO:0016413: O-acetyltransferase activity1.64E-02
85GO:0008417: fucosyltransferase activity1.66E-02
86GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.66E-02
87GO:0003779: actin binding1.72E-02
88GO:0030247: polysaccharide binding2.05E-02
89GO:0004672: protein kinase activity2.23E-02
90GO:0003691: double-stranded telomeric DNA binding2.31E-02
91GO:0005089: Rho guanyl-nucleotide exchange factor activity2.31E-02
92GO:0004222: metalloendopeptidase activity2.51E-02
93GO:0000049: tRNA binding2.54E-02
94GO:0003723: RNA binding2.57E-02
95GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding2.64E-02
96GO:0008289: lipid binding2.66E-02
97GO:0003725: double-stranded RNA binding2.79E-02
98GO:0015266: protein channel activity2.79E-02
99GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.79E-02
100GO:0009982: pseudouridine synthase activity2.79E-02
101GO:0003697: single-stranded DNA binding2.89E-02
102GO:0003993: acid phosphatase activity3.02E-02
103GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.04E-02
104GO:0003774: motor activity3.04E-02
105GO:0016887: ATPase activity3.18E-02
106GO:0008061: chitin binding3.29E-02
107GO:0003712: transcription cofactor activity3.29E-02
108GO:0008146: sulfotransferase activity3.29E-02
109GO:0051539: 4 iron, 4 sulfur cluster binding3.29E-02
110GO:0004190: aspartic-type endopeptidase activity3.29E-02
111GO:0042803: protein homodimerization activity3.56E-02
112GO:0004722: protein serine/threonine phosphatase activity3.80E-02
113GO:0005528: FK506 binding3.83E-02
114GO:0051536: iron-sulfur cluster binding3.83E-02
115GO:0005345: purine nucleobase transmembrane transporter activity4.11E-02
116GO:0008094: DNA-dependent ATPase activity4.40E-02
117GO:0004707: MAP kinase activity4.40E-02
118GO:0033612: receptor serine/threonine kinase binding4.40E-02
119GO:0003964: RNA-directed DNA polymerase activity4.40E-02
120GO:0009055: electron carrier activity4.97E-02
RankGO TermAdjusted P value
1GO:0000408: EKC/KEOPS complex0.00E+00
2GO:0009349: riboflavin synthase complex0.00E+00
3GO:0009507: chloroplast3.91E-06
4GO:0009941: chloroplast envelope5.04E-04
5GO:0000791: euchromatin6.78E-04
6GO:0031357: integral component of chloroplast inner membrane1.46E-03
7GO:0009569: chloroplast starch grain1.46E-03
8GO:0030870: Mre11 complex1.46E-03
9GO:0000427: plastid-encoded plastid RNA polymerase complex1.46E-03
10GO:0009570: chloroplast stroma1.86E-03
11GO:0005884: actin filament2.35E-03
12GO:0019897: extrinsic component of plasma membrane2.41E-03
13GO:0010007: magnesium chelatase complex2.41E-03
14GO:0030139: endocytic vesicle2.41E-03
15GO:0009317: acetyl-CoA carboxylase complex2.41E-03
16GO:0009534: chloroplast thylakoid2.74E-03
17GO:0032585: multivesicular body membrane3.51E-03
18GO:0032432: actin filament bundle3.51E-03
19GO:0005886: plasma membrane4.52E-03
20GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)4.74E-03
21GO:0005828: kinetochore microtubule4.74E-03
22GO:0030286: dynein complex4.74E-03
23GO:0000776: kinetochore6.09E-03
24GO:0000795: synaptonemal complex6.09E-03
25GO:0015629: actin cytoskeleton7.01E-03
26GO:0000793: condensed chromosome7.56E-03
27GO:0005871: kinesin complex8.28E-03
28GO:0000777: condensed chromosome kinetochore9.15E-03
29GO:0000815: ESCRT III complex9.15E-03
30GO:0010369: chromocenter9.15E-03
31GO:0009986: cell surface1.09E-02
32GO:0000794: condensed nuclear chromosome1.09E-02
33GO:0048226: Casparian strip1.27E-02
34GO:0009501: amyloplast1.27E-02
35GO:0000783: nuclear telomere cap complex1.46E-02
36GO:0046658: anchored component of plasma membrane1.46E-02
37GO:0005876: spindle microtubule1.86E-02
38GO:0005667: transcription factor complex1.95E-02
39GO:0000418: DNA-directed RNA polymerase IV complex2.08E-02
40GO:0016459: myosin complex2.08E-02
41GO:0090404: pollen tube tip2.31E-02
42GO:0009508: plastid chromosome2.79E-02
43GO:0030095: chloroplast photosystem II3.04E-02
44GO:0031225: anchored component of membrane3.40E-02
45GO:0009654: photosystem II oxygen evolving complex4.11E-02
46GO:0005856: cytoskeleton4.18E-02
<
Gene type



Gene DE type