GO Enrichment Analysis of Co-expressed Genes with
AT5G16390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 5 | GO:0032544: plastid translation | 3.96E-09 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 2.12E-08 |
| 7 | GO:0015979: photosynthesis | 3.92E-06 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.63E-06 |
| 9 | GO:0071484: cellular response to light intensity | 4.63E-06 |
| 10 | GO:0006412: translation | 4.73E-06 |
| 11 | GO:0010207: photosystem II assembly | 5.23E-06 |
| 12 | GO:0006546: glycine catabolic process | 8.78E-06 |
| 13 | GO:0019464: glycine decarboxylation via glycine cleavage system | 8.78E-06 |
| 14 | GO:0080093: regulation of photorespiration | 9.88E-05 |
| 15 | GO:0031998: regulation of fatty acid beta-oxidation | 9.88E-05 |
| 16 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.48E-04 |
| 17 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.32E-04 |
| 18 | GO:0010198: synergid death | 2.32E-04 |
| 19 | GO:0071457: cellular response to ozone | 2.32E-04 |
| 20 | GO:0009735: response to cytokinin | 2.47E-04 |
| 21 | GO:0009768: photosynthesis, light harvesting in photosystem I | 3.49E-04 |
| 22 | GO:0090391: granum assembly | 3.86E-04 |
| 23 | GO:0006542: glutamine biosynthetic process | 7.37E-04 |
| 24 | GO:0019676: ammonia assimilation cycle | 7.37E-04 |
| 25 | GO:0071486: cellular response to high light intensity | 7.37E-04 |
| 26 | GO:0045727: positive regulation of translation | 7.37E-04 |
| 27 | GO:0015994: chlorophyll metabolic process | 7.37E-04 |
| 28 | GO:0010236: plastoquinone biosynthetic process | 9.32E-04 |
| 29 | GO:0006097: glyoxylate cycle | 9.32E-04 |
| 30 | GO:0071493: cellular response to UV-B | 9.32E-04 |
| 31 | GO:1902456: regulation of stomatal opening | 1.14E-03 |
| 32 | GO:0010190: cytochrome b6f complex assembly | 1.14E-03 |
| 33 | GO:0006751: glutathione catabolic process | 1.14E-03 |
| 34 | GO:0042549: photosystem II stabilization | 1.14E-03 |
| 35 | GO:0009228: thiamine biosynthetic process | 1.14E-03 |
| 36 | GO:0015995: chlorophyll biosynthetic process | 1.27E-03 |
| 37 | GO:0010189: vitamin E biosynthetic process | 1.36E-03 |
| 38 | GO:0009955: adaxial/abaxial pattern specification | 1.36E-03 |
| 39 | GO:1901259: chloroplast rRNA processing | 1.36E-03 |
| 40 | GO:0009772: photosynthetic electron transport in photosystem II | 1.59E-03 |
| 41 | GO:0009658: chloroplast organization | 1.77E-03 |
| 42 | GO:0042254: ribosome biogenesis | 1.81E-03 |
| 43 | GO:0009642: response to light intensity | 1.84E-03 |
| 44 | GO:0006810: transport | 2.02E-03 |
| 45 | GO:0019430: removal of superoxide radicals | 2.10E-03 |
| 46 | GO:0009657: plastid organization | 2.10E-03 |
| 47 | GO:0046686: response to cadmium ion | 2.24E-03 |
| 48 | GO:0010114: response to red light | 2.27E-03 |
| 49 | GO:0010206: photosystem II repair | 2.37E-03 |
| 50 | GO:0006098: pentose-phosphate shunt | 2.37E-03 |
| 51 | GO:0043085: positive regulation of catalytic activity | 3.25E-03 |
| 52 | GO:0000272: polysaccharide catabolic process | 3.25E-03 |
| 53 | GO:0006415: translational termination | 3.25E-03 |
| 54 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.57E-03 |
| 55 | GO:0006096: glycolytic process | 3.59E-03 |
| 56 | GO:0006108: malate metabolic process | 3.89E-03 |
| 57 | GO:0006094: gluconeogenesis | 3.89E-03 |
| 58 | GO:0010143: cutin biosynthetic process | 4.22E-03 |
| 59 | GO:0019253: reductive pentose-phosphate cycle | 4.22E-03 |
| 60 | GO:0016226: iron-sulfur cluster assembly | 6.42E-03 |
| 61 | GO:0030245: cellulose catabolic process | 6.42E-03 |
| 62 | GO:0009409: response to cold | 7.20E-03 |
| 63 | GO:0042631: cellular response to water deprivation | 8.07E-03 |
| 64 | GO:0042335: cuticle development | 8.07E-03 |
| 65 | GO:0006662: glycerol ether metabolic process | 8.50E-03 |
| 66 | GO:0071472: cellular response to salt stress | 8.50E-03 |
| 67 | GO:0010027: thylakoid membrane organization | 1.28E-02 |
| 68 | GO:0006974: cellular response to DNA damage stimulus | 1.38E-02 |
| 69 | GO:0042128: nitrate assimilation | 1.38E-02 |
| 70 | GO:0018298: protein-chromophore linkage | 1.54E-02 |
| 71 | GO:0009817: defense response to fungus, incompatible interaction | 1.54E-02 |
| 72 | GO:0010218: response to far red light | 1.65E-02 |
| 73 | GO:0007568: aging | 1.71E-02 |
| 74 | GO:0009637: response to blue light | 1.82E-02 |
| 75 | GO:0009853: photorespiration | 1.82E-02 |
| 76 | GO:0034599: cellular response to oxidative stress | 1.88E-02 |
| 77 | GO:0006099: tricarboxylic acid cycle | 1.88E-02 |
| 78 | GO:0006869: lipid transport | 1.88E-02 |
| 79 | GO:0032259: methylation | 2.02E-02 |
| 80 | GO:0006855: drug transmembrane transport | 2.44E-02 |
| 81 | GO:0009664: plant-type cell wall organization | 2.57E-02 |
| 82 | GO:0006364: rRNA processing | 2.70E-02 |
| 83 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.77E-02 |
| 84 | GO:0006417: regulation of translation | 2.90E-02 |
| 85 | GO:0005975: carbohydrate metabolic process | 3.24E-02 |
| 86 | GO:0006396: RNA processing | 3.54E-02 |
| 87 | GO:0009742: brassinosteroid mediated signaling pathway | 3.62E-02 |
| 88 | GO:0040008: regulation of growth | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 3 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 4 | GO:0019843: rRNA binding | 1.94E-12 |
| 5 | GO:0003735: structural constituent of ribosome | 4.41E-08 |
| 6 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 4.63E-06 |
| 7 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.78E-06 |
| 8 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 9.88E-05 |
| 9 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 9.88E-05 |
| 10 | GO:0047746: chlorophyllase activity | 2.32E-04 |
| 11 | GO:0004618: phosphoglycerate kinase activity | 2.32E-04 |
| 12 | GO:0010297: heteropolysaccharide binding | 2.32E-04 |
| 13 | GO:0003839: gamma-glutamylcyclotransferase activity | 2.32E-04 |
| 14 | GO:0004047: aminomethyltransferase activity | 2.32E-04 |
| 15 | GO:0031409: pigment binding | 2.84E-04 |
| 16 | GO:0016149: translation release factor activity, codon specific | 5.54E-04 |
| 17 | GO:0016851: magnesium chelatase activity | 5.54E-04 |
| 18 | GO:0048038: quinone binding | 7.65E-04 |
| 19 | GO:0004356: glutamate-ammonia ligase activity | 9.32E-04 |
| 20 | GO:0016615: malate dehydrogenase activity | 1.14E-03 |
| 21 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.14E-03 |
| 22 | GO:0004332: fructose-bisphosphate aldolase activity | 1.14E-03 |
| 23 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.14E-03 |
| 24 | GO:0004784: superoxide dismutase activity | 1.14E-03 |
| 25 | GO:0016168: chlorophyll binding | 1.15E-03 |
| 26 | GO:0030060: L-malate dehydrogenase activity | 1.36E-03 |
| 27 | GO:0003747: translation release factor activity | 2.37E-03 |
| 28 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.45E-03 |
| 29 | GO:0008047: enzyme activator activity | 2.95E-03 |
| 30 | GO:0047372: acylglycerol lipase activity | 3.25E-03 |
| 31 | GO:0031072: heat shock protein binding | 3.89E-03 |
| 32 | GO:0004565: beta-galactosidase activity | 3.89E-03 |
| 33 | GO:0008266: poly(U) RNA binding | 4.22E-03 |
| 34 | GO:0051536: iron-sulfur cluster binding | 5.28E-03 |
| 35 | GO:0005528: FK506 binding | 5.28E-03 |
| 36 | GO:0008810: cellulase activity | 6.82E-03 |
| 37 | GO:0003727: single-stranded RNA binding | 7.23E-03 |
| 38 | GO:0047134: protein-disulfide reductase activity | 7.64E-03 |
| 39 | GO:0050662: coenzyme binding | 8.94E-03 |
| 40 | GO:0004791: thioredoxin-disulfide reductase activity | 8.94E-03 |
| 41 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.08E-02 |
| 42 | GO:0008168: methyltransferase activity | 1.11E-02 |
| 43 | GO:0016791: phosphatase activity | 1.13E-02 |
| 44 | GO:0008483: transaminase activity | 1.18E-02 |
| 45 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.18E-02 |
| 46 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.49E-02 |
| 47 | GO:0003824: catalytic activity | 2.16E-02 |
| 48 | GO:0004185: serine-type carboxypeptidase activity | 2.18E-02 |
| 49 | GO:0043621: protein self-association | 2.31E-02 |
| 50 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.44E-02 |
| 51 | GO:0016491: oxidoreductase activity | 2.72E-02 |
| 52 | GO:0008289: lipid binding | 2.94E-02 |
| 53 | GO:0030599: pectinesterase activity | 3.32E-02 |
| 54 | GO:0051082: unfolded protein binding | 3.47E-02 |
| 55 | GO:0015035: protein disulfide oxidoreductase activity | 3.54E-02 |
| 56 | GO:0016746: transferase activity, transferring acyl groups | 3.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.14E-38 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 4.84E-23 |
| 4 | GO:0009579: thylakoid | 3.70E-21 |
| 5 | GO:0009941: chloroplast envelope | 7.15E-21 |
| 6 | GO:0009534: chloroplast thylakoid | 5.35E-18 |
| 7 | GO:0009570: chloroplast stroma | 7.74E-17 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.65E-11 |
| 9 | GO:0005840: ribosome | 1.62E-09 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 3.69E-06 |
| 11 | GO:0005960: glycine cleavage complex | 4.63E-06 |
| 12 | GO:0048046: apoplast | 6.94E-06 |
| 13 | GO:0031977: thylakoid lumen | 1.02E-05 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 1.11E-05 |
| 15 | GO:0010287: plastoglobule | 6.14E-05 |
| 16 | GO:0010319: stromule | 6.23E-05 |
| 17 | GO:0009547: plastid ribosome | 9.88E-05 |
| 18 | GO:0030095: chloroplast photosystem II | 2.25E-04 |
| 19 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 2.32E-04 |
| 20 | GO:0030076: light-harvesting complex | 2.54E-04 |
| 21 | GO:0010007: magnesium chelatase complex | 3.86E-04 |
| 22 | GO:0016020: membrane | 4.24E-04 |
| 23 | GO:0009706: chloroplast inner membrane | 5.21E-04 |
| 24 | GO:0019898: extrinsic component of membrane | 7.16E-04 |
| 25 | GO:0009539: photosystem II reaction center | 2.10E-03 |
| 26 | GO:0005763: mitochondrial small ribosomal subunit | 2.37E-03 |
| 27 | GO:0000311: plastid large ribosomal subunit | 3.57E-03 |
| 28 | GO:0000312: plastid small ribosomal subunit | 4.22E-03 |
| 29 | GO:0042651: thylakoid membrane | 5.65E-03 |
| 30 | GO:0022626: cytosolic ribosome | 7.43E-03 |
| 31 | GO:0009522: photosystem I | 8.94E-03 |
| 32 | GO:0005777: peroxisome | 9.37E-03 |
| 33 | GO:0009523: photosystem II | 9.39E-03 |
| 34 | GO:0005618: cell wall | 1.14E-02 |
| 35 | GO:0031969: chloroplast membrane | 1.43E-02 |
| 36 | GO:0015934: large ribosomal subunit | 1.71E-02 |
| 37 | GO:0005623: cell | 4.15E-02 |