co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G16180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070125: mitochondrial translational elongation	0.00E+00
2	GO:0070979: protein K11-linked ubiquitination	0.00E+00
3	GO:2000505: regulation of energy homeostasis	0.00E+00
4	GO:0010081: regulation of inflorescence meristem growth	0.00E+00
5	GO:0006114: glycerol biosynthetic process	0.00E+00
6	GO:0000372: Group I intron splicing	0.00E+00
7	GO:0006399: tRNA metabolic process	0.00E+00
8	GO:0016117: carotenoid biosynthetic process	2.65E-05
9	GO:0010239: chloroplast mRNA processing	4.98E-05
10	GO:0045037: protein import into chloroplast stroma	7.62E-05
11	GO:0009793: embryo development ending in seed dormancy	1.35E-04
12	GO:0016123: xanthophyll biosynthetic process	1.37E-04
13	GO:0010158: abaxial cell fate specification	1.37E-04
14	GO:0010236: plastoquinone biosynthetic process	1.37E-04
15	GO:0006436: tryptophanyl-tRNA aminoacylation	3.81E-04
16	GO:0000066: mitochondrial ornithine transport	3.81E-04
17	GO:0034757: negative regulation of iron ion transport	3.81E-04
18	GO:0000012: single strand break repair	3.81E-04
19	GO:0043266: regulation of potassium ion transport	3.81E-04
20	GO:0010080: regulation of floral meristem growth	3.81E-04
21	GO:0043087: regulation of GTPase activity	3.81E-04
22	GO:2000021: regulation of ion homeostasis	3.81E-04
23	GO:0071482: cellular response to light stimulus	5.27E-04
24	GO:0009657: plastid organization	5.27E-04
25	GO:0000373: Group II intron splicing	6.32E-04
26	GO:0048255: mRNA stabilization	8.27E-04
27	GO:0010569: regulation of double-strand break repair via homologous recombination	8.27E-04
28	GO:0006435: threonyl-tRNA aminoacylation	8.27E-04
29	GO:0010271: regulation of chlorophyll catabolic process	8.27E-04
30	GO:0001736: establishment of planar polarity	8.27E-04
31	GO:0010582: floral meristem determinacy	1.14E-03
32	GO:0006094: gluconeogenesis	1.29E-03
33	GO:0030029: actin filament-based process	1.34E-03
34	GO:0010022: meristem determinacy	1.34E-03
35	GO:0080117: secondary growth	1.34E-03
36	GO:0031145: anaphase-promoting complex-dependent catabolic process	1.34E-03
37	GO:0051604: protein maturation	1.34E-03
38	GO:0006696: ergosterol biosynthetic process	1.34E-03
39	GO:0051513: regulation of monopolar cell growth	1.93E-03
40	GO:0030071: regulation of mitotic metaphase/anaphase transition	1.93E-03
41	GO:0051639: actin filament network formation	1.93E-03
42	GO:0034059: response to anoxia	1.93E-03
43	GO:0009800: cinnamic acid biosynthetic process	1.93E-03
44	GO:0042989: sequestering of actin monomers	1.93E-03
45	GO:2001141: regulation of RNA biosynthetic process	1.93E-03
46	GO:0005992: trehalose biosynthetic process	2.02E-03
47	GO:0009451: RNA modification	2.59E-03
48	GO:0051781: positive regulation of cell division	2.60E-03
49	GO:0051764: actin crosslink formation	2.60E-03
50	GO:0051322: anaphase	2.60E-03
51	GO:0015846: polyamine transport	2.60E-03
52	GO:0008295: spermidine biosynthetic process	2.60E-03
53	GO:1902183: regulation of shoot apical meristem development	3.32E-03
54	GO:0032876: negative regulation of DNA endoreduplication	3.32E-03
55	GO:0080110: sporopollenin biosynthetic process	3.32E-03
56	GO:0009696: salicylic acid metabolic process	3.32E-03
57	GO:0030041: actin filament polymerization	3.32E-03
58	GO:0031365: N-terminal protein amino acid modification	3.32E-03
59	GO:0010087: phloem or xylem histogenesis	3.72E-03
60	GO:0009958: positive gravitropism	4.00E-03
61	GO:0016554: cytidine to uridine editing	4.11E-03
62	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	4.11E-03
63	GO:0006559: L-phenylalanine catabolic process	4.11E-03
64	GO:0048831: regulation of shoot system development	4.11E-03
65	GO:0048316: seed development	4.77E-03
66	GO:1901259: chloroplast rRNA processing	4.95E-03
67	GO:0009942: longitudinal axis specification	4.95E-03
68	GO:0048509: regulation of meristem development	4.95E-03
69	GO:0007264: small GTPase mediated signal transduction	5.28E-03
70	GO:0009610: response to symbiotic fungus	5.85E-03
71	GO:0010050: vegetative phase change	5.85E-03
72	GO:0051510: regulation of unidimensional cell growth	5.85E-03
73	GO:0048564: photosystem I assembly	6.80E-03
74	GO:0006353: DNA-templated transcription, termination	6.80E-03
75	GO:0070413: trehalose metabolism in response to stress	6.80E-03
76	GO:0009850: auxin metabolic process	6.80E-03
77	GO:0032875: regulation of DNA endoreduplication	6.80E-03
78	GO:0009827: plant-type cell wall modification	7.80E-03
79	GO:0032544: plastid translation	7.80E-03
80	GO:0007389: pattern specification process	7.80E-03
81	GO:0006098: pentose-phosphate shunt	8.86E-03
82	GO:0090305: nucleic acid phosphodiester bond hydrolysis	8.86E-03
83	GO:0010206: photosystem II repair	8.86E-03
84	GO:2000024: regulation of leaf development	8.86E-03
85	GO:0016311: dephosphorylation	8.90E-03
86	GO:0009817: defense response to fungus, incompatible interaction	9.36E-03
87	GO:0000160: phosphorelay signal transduction system	9.84E-03
88	GO:1900865: chloroplast RNA modification	9.96E-03
89	GO:0016571: histone methylation	9.96E-03
90	GO:0016573: histone acetylation	9.96E-03
91	GO:0040008: regulation of growth	1.10E-02
92	GO:0006259: DNA metabolic process	1.11E-02
93	GO:0019538: protein metabolic process	1.11E-02
94	GO:0009299: mRNA transcription	1.11E-02
95	GO:0006535: cysteine biosynthetic process from serine	1.11E-02
96	GO:0048829: root cap development	1.11E-02
97	GO:0006265: DNA topological change	1.23E-02
98	GO:0006415: translational termination	1.23E-02
99	GO:0006352: DNA-templated transcription, initiation	1.23E-02
100	GO:0048765: root hair cell differentiation	1.23E-02
101	GO:0006839: mitochondrial transport	1.36E-02
102	GO:0009725: response to hormone	1.48E-02
103	GO:0009926: auxin polar transport	1.54E-02
104	GO:0008283: cell proliferation	1.54E-02
105	GO:0009266: response to temperature stimulus	1.62E-02
106	GO:0006302: double-strand break repair	1.62E-02
107	GO:0010020: chloroplast fission	1.62E-02
108	GO:0010207: photosystem II assembly	1.62E-02
109	GO:0080188: RNA-directed DNA methylation	1.75E-02
110	GO:0090351: seedling development	1.75E-02
111	GO:0009658: chloroplast organization	2.03E-02
112	GO:0019344: cysteine biosynthetic process	2.04E-02
113	GO:0009944: polarity specification of adaxial/abaxial axis	2.04E-02
114	GO:0030150: protein import into mitochondrial matrix	2.04E-02
115	GO:0006338: chromatin remodeling	2.04E-02
116	GO:0007010: cytoskeleton organization	2.04E-02
117	GO:0051017: actin filament bundle assembly	2.04E-02
118	GO:0006289: nucleotide-excision repair	2.04E-02
119	GO:0009734: auxin-activated signaling pathway	2.04E-02
120	GO:0006364: rRNA processing	2.08E-02
121	GO:0009736: cytokinin-activated signaling pathway	2.08E-02
122	GO:0010073: meristem maintenance	2.19E-02
123	GO:0006418: tRNA aminoacylation for protein translation	2.19E-02
124	GO:0003333: amino acid transmembrane transport	2.34E-02
125	GO:0015992: proton transport	2.34E-02
126	GO:0016226: iron-sulfur cluster assembly	2.50E-02
127	GO:0035428: hexose transmembrane transport	2.50E-02
128	GO:0071215: cellular response to abscisic acid stimulus	2.65E-02
129	GO:0010584: pollen exine formation	2.82E-02
130	GO:0006284: base-excision repair	2.82E-02
131	GO:0019722: calcium-mediated signaling	2.82E-02
132	GO:0070417: cellular response to cold	2.98E-02
133	GO:0034220: ion transmembrane transport	3.15E-02
134	GO:0046323: glucose import	3.33E-02
135	GO:0045489: pectin biosynthetic process	3.33E-02
136	GO:0010154: fruit development	3.33E-02
137	GO:0048868: pollen tube development	3.33E-02
138	GO:0007059: chromosome segregation	3.50E-02
139	GO:0048544: recognition of pollen	3.50E-02
140	GO:0009845: seed germination	4.00E-02
141	GO:0010583: response to cyclopentenone	4.05E-02
142	GO:0006281: DNA repair	4.31E-02
143	GO:0009790: embryo development	4.31E-02
144	GO:0010252: auxin homeostasis	4.43E-02
145	GO:0006914: autophagy	4.43E-02
146	GO:0007267: cell-cell signaling	4.62E-02
147	GO:0051607: defense response to virus	4.82E-02
148	GO:0000910: cytokinesis	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0010355: homogentisate farnesyltransferase activity	0.00E+00
2	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
3	GO:0043136: glycerol-3-phosphatase activity	0.00E+00
4	GO:0000121: glycerol-1-phosphatase activity	0.00E+00
5	GO:0010356: homogentisate geranylgeranyltransferase activity	0.00E+00
6	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
7	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
8	GO:0010357: homogentisate solanesyltransferase activity	0.00E+00
9	GO:0019808: polyamine binding	0.00E+00
10	GO:0050613: delta14-sterol reductase activity	0.00E+00
11	GO:0046905: phytoene synthase activity	0.00E+00
12	GO:0001872: (1->3)-beta-D-glucan binding	4.98E-05
13	GO:0005290: L-histidine transmembrane transporter activity	3.81E-04
14	GO:0051996: squalene synthase activity	3.81E-04
15	GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity	3.81E-04
16	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.81E-04
17	GO:0004830: tryptophan-tRNA ligase activity	3.81E-04
18	GO:0043425: bHLH transcription factor binding	8.27E-04
19	GO:0004047: aminomethyltransferase activity	8.27E-04
20	GO:0004766: spermidine synthase activity	8.27E-04
21	GO:0008805: carbon-monoxide oxygenase activity	8.27E-04
22	GO:0000064: L-ornithine transmembrane transporter activity	8.27E-04
23	GO:0009884: cytokinin receptor activity	8.27E-04
24	GO:0004829: threonine-tRNA ligase activity	8.27E-04
25	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	8.27E-04
26	GO:0050017: L-3-cyanoalanine synthase activity	8.27E-04
27	GO:0010291: carotene beta-ring hydroxylase activity	8.27E-04
28	GO:0004805: trehalose-phosphatase activity	8.68E-04
29	GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups	1.34E-03
30	GO:0045548: phenylalanine ammonia-lyase activity	1.34E-03
31	GO:0003913: DNA photolyase activity	1.34E-03
32	GO:0004148: dihydrolipoyl dehydrogenase activity	1.34E-03
33	GO:0016805: dipeptidase activity	1.34E-03
34	GO:0005034: osmosensor activity	1.34E-03
35	GO:0080031: methyl salicylate esterase activity	1.93E-03
36	GO:0015189: L-lysine transmembrane transporter activity	1.93E-03
37	GO:0015181: arginine transmembrane transporter activity	1.93E-03
38	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.93E-03
39	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.93E-03
40	GO:0016149: translation release factor activity, codon specific	1.93E-03
41	GO:0043424: protein histidine kinase binding	2.22E-03
42	GO:0001053: plastid sigma factor activity	2.60E-03
43	GO:0010011: auxin binding	2.60E-03
44	GO:0016987: sigma factor activity	2.60E-03
45	GO:0010328: auxin influx transmembrane transporter activity	2.60E-03
46	GO:0070628: proteasome binding	2.60E-03
47	GO:0043621: protein self-association	2.80E-03
48	GO:0030570: pectate lyase activity	2.92E-03
49	GO:0008725: DNA-3-methyladenine glycosylase activity	3.32E-03
50	GO:0003785: actin monomer binding	3.32E-03
51	GO:0005471: ATP:ADP antiporter activity	3.32E-03
52	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	3.32E-03
53	GO:0004519: endonuclease activity	3.77E-03
54	GO:0080030: methyl indole-3-acetate esterase activity	4.11E-03
55	GO:0004332: fructose-bisphosphate aldolase activity	4.11E-03
56	GO:0031593: polyubiquitin binding	4.11E-03
57	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.52E-03
58	GO:0004124: cysteine synthase activity	4.95E-03
59	GO:0004017: adenylate kinase activity	4.95E-03
60	GO:0004656: procollagen-proline 4-dioxygenase activity	4.95E-03
61	GO:0019900: kinase binding	4.95E-03
62	GO:0004518: nuclease activity	5.28E-03
63	GO:0008235: metalloexopeptidase activity	5.85E-03
64	GO:0004427: inorganic diphosphatase activity	5.85E-03
65	GO:0009881: photoreceptor activity	5.85E-03
66	GO:0003723: RNA binding	6.77E-03
67	GO:0043022: ribosome binding	6.80E-03
68	GO:0019843: rRNA binding	7.73E-03
69	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	7.80E-03
70	GO:0030247: polysaccharide binding	8.44E-03
71	GO:0003747: translation release factor activity	8.86E-03
72	GO:0008236: serine-type peptidase activity	8.90E-03
73	GO:0008565: protein transporter activity	9.73E-03
74	GO:0005096: GTPase activator activity	9.84E-03
75	GO:0009672: auxin:proton symporter activity	9.96E-03
76	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.07E-02
77	GO:0004673: protein histidine kinase activity	1.11E-02
78	GO:0003924: GTPase activity	1.22E-02
79	GO:0004161: dimethylallyltranstransferase activity	1.23E-02
80	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.23E-02
81	GO:0004177: aminopeptidase activity	1.23E-02
82	GO:0000155: phosphorelay sensor kinase activity	1.48E-02
83	GO:0009982: pseudouridine synthase activity	1.48E-02
84	GO:0003725: double-stranded RNA binding	1.48E-02
85	GO:0010329: auxin efflux transmembrane transporter activity	1.48E-02
86	GO:0015266: protein channel activity	1.48E-02
87	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.89E-02
88	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.89E-02
89	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.89E-02
90	GO:0005515: protein binding	2.03E-02
91	GO:0031418: L-ascorbic acid binding	2.04E-02
92	GO:0043130: ubiquitin binding	2.04E-02
93	GO:0051087: chaperone binding	2.19E-02
94	GO:0004812: aminoacyl-tRNA ligase activity	2.98E-02
95	GO:0008536: Ran GTPase binding	3.33E-02
96	GO:0004527: exonuclease activity	3.33E-02
97	GO:0005355: glucose transmembrane transporter activity	3.50E-02
98	GO:0010181: FMN binding	3.50E-02
99	GO:0050662: coenzyme binding	3.50E-02
100	GO:0019901: protein kinase binding	3.68E-02
101	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.86E-02
102	GO:0016829: lyase activity	4.00E-02
103	GO:0000156: phosphorelay response regulator activity	4.24E-02
104	GO:0051015: actin filament binding	4.24E-02
105	GO:0003684: damaged DNA binding	4.43E-02
106	GO:0016791: phosphatase activity	4.43E-02
107	GO:0008237: metallopeptidase activity	4.62E-02
108	GO:0005200: structural constituent of cytoskeleton	4.62E-02
109	GO:0016413: O-acetyltransferase activity	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0035452: extrinsic component of plastid membrane	0.00E+00
2	GO:0042597: periplasmic space	0.00E+00
3	GO:0009537: proplastid	0.00E+00
4	GO:0009507: chloroplast	1.01E-15
5	GO:0009570: chloroplast stroma	3.01E-04
6	GO:0009513: etioplast	8.27E-04
7	GO:0009574: preprophase band	1.29E-03
8	GO:0009509: chromoplast	1.34E-03
9	GO:0009941: chloroplast envelope	1.43E-03
10	GO:0032432: actin filament bundle	1.93E-03
11	GO:0009532: plastid stroma	2.44E-03
12	GO:0030663: COPI-coated vesicle membrane	2.60E-03
13	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	2.60E-03
14	GO:0009526: plastid envelope	2.60E-03
15	GO:0009535: chloroplast thylakoid membrane	2.92E-03
16	GO:0055035: plastid thylakoid membrane	3.32E-03
17	GO:0005655: nucleolar ribonuclease P complex	4.95E-03
18	GO:0009706: chloroplast inner membrane	5.80E-03
19	GO:0042807: central vacuole	5.85E-03
20	GO:0009986: cell surface	5.85E-03
21	GO:0031969: chloroplast membrane	6.76E-03
22	GO:0009501: amyloplast	6.80E-03
23	GO:0031305: integral component of mitochondrial inner membrane	6.80E-03
24	GO:0000326: protein storage vacuole	7.80E-03
25	GO:0005623: cell	8.00E-03
26	GO:0005680: anaphase-promoting complex	8.86E-03
27	GO:0016604: nuclear body	9.96E-03
28	GO:0005759: mitochondrial matrix	1.03E-02
29	GO:0030125: clathrin vesicle coat	1.11E-02
30	GO:0005884: actin filament	1.23E-02
31	GO:0000311: plastid large ribosomal subunit	1.36E-02
32	GO:0005578: proteinaceous extracellular matrix	1.48E-02
33	GO:0005938: cell cortex	1.48E-02
34	GO:0016602: CCAAT-binding factor complex	1.48E-02
35	GO:0009536: plastid	1.55E-02
36	GO:0030176: integral component of endoplasmic reticulum membrane	1.75E-02
37	GO:0005768: endosome	2.49E-02
38	GO:0015629: actin cytoskeleton	2.65E-02
39	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.82E-02
40	GO:0010287: plastoglobule	3.51E-02
41	GO:0031965: nuclear membrane	3.68E-02
42	GO:0009579: thylakoid	3.73E-02
43	GO:0009295: nucleoid	4.62E-02