GO Enrichment Analysis of Co-expressed Genes with
AT5G15600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 4 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 5 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 6 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.85E-06 |
| 7 | GO:0015979: photosynthesis | 1.29E-04 |
| 8 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.33E-04 |
| 9 | GO:0046467: membrane lipid biosynthetic process | 1.33E-04 |
| 10 | GO:0042371: vitamin K biosynthetic process | 1.33E-04 |
| 11 | GO:0080093: regulation of photorespiration | 1.33E-04 |
| 12 | GO:0031998: regulation of fatty acid beta-oxidation | 1.33E-04 |
| 13 | GO:0019684: photosynthesis, light reaction | 2.29E-04 |
| 14 | GO:0034755: iron ion transmembrane transport | 3.07E-04 |
| 15 | GO:0071457: cellular response to ozone | 3.07E-04 |
| 16 | GO:0010207: photosystem II assembly | 3.42E-04 |
| 17 | GO:0010114: response to red light | 3.83E-04 |
| 18 | GO:0090391: granum assembly | 5.06E-04 |
| 19 | GO:0005977: glycogen metabolic process | 5.06E-04 |
| 20 | GO:0055114: oxidation-reduction process | 6.86E-04 |
| 21 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 7.24E-04 |
| 22 | GO:0006168: adenine salvage | 7.24E-04 |
| 23 | GO:0006166: purine ribonucleoside salvage | 7.24E-04 |
| 24 | GO:0071484: cellular response to light intensity | 7.24E-04 |
| 25 | GO:0009152: purine ribonucleotide biosynthetic process | 7.24E-04 |
| 26 | GO:0046653: tetrahydrofolate metabolic process | 7.24E-04 |
| 27 | GO:0010107: potassium ion import | 9.59E-04 |
| 28 | GO:0006546: glycine catabolic process | 9.59E-04 |
| 29 | GO:0010021: amylopectin biosynthetic process | 9.59E-04 |
| 30 | GO:0071486: cellular response to high light intensity | 9.59E-04 |
| 31 | GO:0009765: photosynthesis, light harvesting | 9.59E-04 |
| 32 | GO:0015994: chlorophyll metabolic process | 9.59E-04 |
| 33 | GO:0019252: starch biosynthetic process | 1.06E-03 |
| 34 | GO:0071493: cellular response to UV-B | 1.21E-03 |
| 35 | GO:0098719: sodium ion import across plasma membrane | 1.21E-03 |
| 36 | GO:0006564: L-serine biosynthetic process | 1.21E-03 |
| 37 | GO:0010236: plastoquinone biosynthetic process | 1.21E-03 |
| 38 | GO:0000278: mitotic cell cycle | 1.21E-03 |
| 39 | GO:0006097: glyoxylate cycle | 1.21E-03 |
| 40 | GO:0044209: AMP salvage | 1.21E-03 |
| 41 | GO:0006465: signal peptide processing | 1.21E-03 |
| 42 | GO:0010190: cytochrome b6f complex assembly | 1.49E-03 |
| 43 | GO:0050665: hydrogen peroxide biosynthetic process | 1.49E-03 |
| 44 | GO:0042549: photosystem II stabilization | 1.49E-03 |
| 45 | GO:0045737: positive regulation of cyclin-dependent protein serine/threonine kinase activity | 1.78E-03 |
| 46 | GO:0010189: vitamin E biosynthetic process | 1.78E-03 |
| 47 | GO:0009854: oxidative photosynthetic carbon pathway | 1.78E-03 |
| 48 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.09E-03 |
| 49 | GO:0009645: response to low light intensity stimulus | 2.09E-03 |
| 50 | GO:1900056: negative regulation of leaf senescence | 2.09E-03 |
| 51 | GO:0010078: maintenance of root meristem identity | 2.42E-03 |
| 52 | GO:0055075: potassium ion homeostasis | 2.42E-03 |
| 53 | GO:0052543: callose deposition in cell wall | 2.42E-03 |
| 54 | GO:0048564: photosystem I assembly | 2.42E-03 |
| 55 | GO:0009657: plastid organization | 2.77E-03 |
| 56 | GO:0019430: removal of superoxide radicals | 2.77E-03 |
| 57 | GO:0010204: defense response signaling pathway, resistance gene-independent | 2.77E-03 |
| 58 | GO:0043562: cellular response to nitrogen levels | 2.77E-03 |
| 59 | GO:0017004: cytochrome complex assembly | 2.77E-03 |
| 60 | GO:0009821: alkaloid biosynthetic process | 3.13E-03 |
| 61 | GO:0090333: regulation of stomatal closure | 3.13E-03 |
| 62 | GO:0006098: pentose-phosphate shunt | 3.13E-03 |
| 63 | GO:0010380: regulation of chlorophyll biosynthetic process | 3.50E-03 |
| 64 | GO:0007346: regulation of mitotic cell cycle | 3.50E-03 |
| 65 | GO:0051453: regulation of intracellular pH | 3.50E-03 |
| 66 | GO:0005982: starch metabolic process | 3.50E-03 |
| 67 | GO:0006949: syncytium formation | 3.89E-03 |
| 68 | GO:0009773: photosynthetic electron transport in photosystem I | 4.30E-03 |
| 69 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.30E-03 |
| 70 | GO:0006879: cellular iron ion homeostasis | 4.30E-03 |
| 71 | GO:0009684: indoleacetic acid biosynthetic process | 4.30E-03 |
| 72 | GO:0006108: malate metabolic process | 5.15E-03 |
| 73 | GO:0006094: gluconeogenesis | 5.15E-03 |
| 74 | GO:0009767: photosynthetic electron transport chain | 5.15E-03 |
| 75 | GO:0010588: cotyledon vascular tissue pattern formation | 5.15E-03 |
| 76 | GO:0048467: gynoecium development | 5.60E-03 |
| 77 | GO:0010143: cutin biosynthetic process | 5.60E-03 |
| 78 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.53E-03 |
| 79 | GO:0042023: DNA endoreduplication | 6.53E-03 |
| 80 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.51E-03 |
| 81 | GO:0019915: lipid storage | 8.02E-03 |
| 82 | GO:0009269: response to desiccation | 8.02E-03 |
| 83 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.55E-03 |
| 84 | GO:0019748: secondary metabolic process | 8.55E-03 |
| 85 | GO:0009058: biosynthetic process | 8.56E-03 |
| 86 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.08E-03 |
| 87 | GO:0009306: protein secretion | 9.63E-03 |
| 88 | GO:0006413: translational initiation | 1.05E-02 |
| 89 | GO:0080022: primary root development | 1.08E-02 |
| 90 | GO:0010087: phloem or xylem histogenesis | 1.08E-02 |
| 91 | GO:0071472: cellular response to salt stress | 1.13E-02 |
| 92 | GO:0009958: positive gravitropism | 1.13E-02 |
| 93 | GO:0006885: regulation of pH | 1.13E-02 |
| 94 | GO:0006814: sodium ion transport | 1.19E-02 |
| 95 | GO:0009735: response to cytokinin | 1.19E-02 |
| 96 | GO:0009791: post-embryonic development | 1.25E-02 |
| 97 | GO:0048825: cotyledon development | 1.25E-02 |
| 98 | GO:0009851: auxin biosynthetic process | 1.25E-02 |
| 99 | GO:1901657: glycosyl compound metabolic process | 1.44E-02 |
| 100 | GO:0009828: plant-type cell wall loosening | 1.51E-02 |
| 101 | GO:0006810: transport | 1.52E-02 |
| 102 | GO:0005975: carbohydrate metabolic process | 1.60E-02 |
| 103 | GO:0009658: chloroplast organization | 1.74E-02 |
| 104 | GO:0042128: nitrate assimilation | 1.85E-02 |
| 105 | GO:0015995: chlorophyll biosynthetic process | 1.92E-02 |
| 106 | GO:0016311: dephosphorylation | 1.99E-02 |
| 107 | GO:0009817: defense response to fungus, incompatible interaction | 2.06E-02 |
| 108 | GO:0018298: protein-chromophore linkage | 2.06E-02 |
| 109 | GO:0080167: response to karrikin | 2.16E-02 |
| 110 | GO:0010218: response to far red light | 2.21E-02 |
| 111 | GO:0048527: lateral root development | 2.29E-02 |
| 112 | GO:0009910: negative regulation of flower development | 2.29E-02 |
| 113 | GO:0009637: response to blue light | 2.44E-02 |
| 114 | GO:0009853: photorespiration | 2.44E-02 |
| 115 | GO:0034599: cellular response to oxidative stress | 2.52E-02 |
| 116 | GO:0006099: tricarboxylic acid cycle | 2.52E-02 |
| 117 | GO:0006869: lipid transport | 2.84E-02 |
| 118 | GO:0000209: protein polyubiquitination | 3.01E-02 |
| 119 | GO:0032259: methylation | 3.06E-02 |
| 120 | GO:0009644: response to high light intensity | 3.09E-02 |
| 121 | GO:0006397: mRNA processing | 3.33E-02 |
| 122 | GO:0009664: plant-type cell wall organization | 3.44E-02 |
| 123 | GO:0006486: protein glycosylation | 3.62E-02 |
| 124 | GO:0006417: regulation of translation | 3.89E-02 |
| 125 | GO:0006096: glycolytic process | 4.07E-02 |
| 126 | GO:0048367: shoot system development | 4.17E-02 |
| 127 | GO:0006396: RNA processing | 4.74E-02 |
| 128 | GO:0051726: regulation of cell cycle | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 4 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 5 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 6 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.47E-05 |
| 7 | GO:0016846: carbon-sulfur lyase activity | 2.41E-05 |
| 8 | GO:0004328: formamidase activity | 1.33E-04 |
| 9 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.33E-04 |
| 10 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.07E-04 |
| 11 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 3.07E-04 |
| 12 | GO:0061575: cyclin-dependent protein serine/threonine kinase activator activity | 3.07E-04 |
| 13 | GO:0019156: isoamylase activity | 3.07E-04 |
| 14 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.07E-04 |
| 15 | GO:0047746: chlorophyllase activity | 3.07E-04 |
| 16 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 3.07E-04 |
| 17 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.07E-04 |
| 18 | GO:0004047: aminomethyltransferase activity | 3.07E-04 |
| 19 | GO:0033201: alpha-1,4-glucan synthase activity | 3.07E-04 |
| 20 | GO:0004751: ribose-5-phosphate isomerase activity | 5.06E-04 |
| 21 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 5.06E-04 |
| 22 | GO:0070402: NADPH binding | 5.06E-04 |
| 23 | GO:0008864: formyltetrahydrofolate deformylase activity | 5.06E-04 |
| 24 | GO:0004373: glycogen (starch) synthase activity | 5.06E-04 |
| 25 | GO:0050734: hydroxycinnamoyltransferase activity | 5.06E-04 |
| 26 | GO:0016851: magnesium chelatase activity | 7.24E-04 |
| 27 | GO:0003999: adenine phosphoribosyltransferase activity | 7.24E-04 |
| 28 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 7.24E-04 |
| 29 | GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity | 7.24E-04 |
| 30 | GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity | 7.24E-04 |
| 31 | GO:0001872: (1->3)-beta-D-glucan binding | 7.24E-04 |
| 32 | GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity | 7.24E-04 |
| 33 | GO:0016491: oxidoreductase activity | 8.97E-04 |
| 34 | GO:0009011: starch synthase activity | 9.59E-04 |
| 35 | GO:0008891: glycolate oxidase activity | 9.59E-04 |
| 36 | GO:0004045: aminoacyl-tRNA hydrolase activity | 9.59E-04 |
| 37 | GO:0048038: quinone binding | 1.13E-03 |
| 38 | GO:0004784: superoxide dismutase activity | 1.49E-03 |
| 39 | GO:0004556: alpha-amylase activity | 1.49E-03 |
| 40 | GO:0015081: sodium ion transmembrane transporter activity | 1.49E-03 |
| 41 | GO:0016615: malate dehydrogenase activity | 1.49E-03 |
| 42 | GO:0004332: fructose-bisphosphate aldolase activity | 1.49E-03 |
| 43 | GO:0030060: L-malate dehydrogenase activity | 1.78E-03 |
| 44 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.78E-03 |
| 45 | GO:0004033: aldo-keto reductase (NADP) activity | 2.42E-03 |
| 46 | GO:0008135: translation factor activity, RNA binding | 2.77E-03 |
| 47 | GO:0016844: strictosidine synthase activity | 3.50E-03 |
| 48 | GO:0005381: iron ion transmembrane transporter activity | 3.50E-03 |
| 49 | GO:0015386: potassium:proton antiporter activity | 4.30E-03 |
| 50 | GO:0008378: galactosyltransferase activity | 4.72E-03 |
| 51 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.15E-03 |
| 52 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 5.60E-03 |
| 53 | GO:0031409: pigment binding | 6.53E-03 |
| 54 | GO:0043130: ubiquitin binding | 7.01E-03 |
| 55 | GO:0005528: FK506 binding | 7.01E-03 |
| 56 | GO:0003727: single-stranded RNA binding | 9.63E-03 |
| 57 | GO:0010181: FMN binding | 1.19E-02 |
| 58 | GO:0019901: protein kinase binding | 1.25E-02 |
| 59 | GO:0003743: translation initiation factor activity | 1.31E-02 |
| 60 | GO:0015385: sodium:proton antiporter activity | 1.44E-02 |
| 61 | GO:0008483: transaminase activity | 1.57E-02 |
| 62 | GO:0016597: amino acid binding | 1.64E-02 |
| 63 | GO:0008168: methyltransferase activity | 1.68E-02 |
| 64 | GO:0016788: hydrolase activity, acting on ester bonds | 1.77E-02 |
| 65 | GO:0016168: chlorophyll binding | 1.78E-02 |
| 66 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.89E-02 |
| 67 | GO:0030247: polysaccharide binding | 1.92E-02 |
| 68 | GO:0102483: scopolin beta-glucosidase activity | 1.92E-02 |
| 69 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.99E-02 |
| 70 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.99E-02 |
| 71 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.21E-02 |
| 72 | GO:0003746: translation elongation factor activity | 2.44E-02 |
| 73 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.52E-02 |
| 74 | GO:0003993: acid phosphatase activity | 2.52E-02 |
| 75 | GO:0008422: beta-glucosidase activity | 2.60E-02 |
| 76 | GO:0016787: hydrolase activity | 2.67E-02 |
| 77 | GO:0042393: histone binding | 2.68E-02 |
| 78 | GO:0004185: serine-type carboxypeptidase activity | 2.92E-02 |
| 79 | GO:0005509: calcium ion binding | 2.92E-02 |
| 80 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.09E-02 |
| 81 | GO:0043621: protein self-association | 3.09E-02 |
| 82 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.26E-02 |
| 83 | GO:0051287: NAD binding | 3.35E-02 |
| 84 | GO:0031625: ubiquitin protein ligase binding | 3.89E-02 |
| 85 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.17E-02 |
| 86 | GO:0008289: lipid binding | 4.42E-02 |
| 87 | GO:0016887: ATPase activity | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042579: microbody | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 8.69E-22 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.51E-12 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 1.33E-11 |
| 5 | GO:0009941: chloroplast envelope | 7.39E-10 |
| 6 | GO:0009570: chloroplast stroma | 7.52E-09 |
| 7 | GO:0009579: thylakoid | 1.23E-08 |
| 8 | GO:0031977: thylakoid lumen | 2.25E-08 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 3.93E-07 |
| 10 | GO:0009534: chloroplast thylakoid | 2.41E-06 |
| 11 | GO:0019898: extrinsic component of membrane | 7.07E-05 |
| 12 | GO:0005787: signal peptidase complex | 1.33E-04 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.33E-04 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.37E-04 |
| 15 | GO:0030095: chloroplast photosystem II | 3.42E-04 |
| 16 | GO:0010007: magnesium chelatase complex | 5.06E-04 |
| 17 | GO:0033281: TAT protein transport complex | 5.06E-04 |
| 18 | GO:0009517: PSII associated light-harvesting complex II | 9.59E-04 |
| 19 | GO:0009522: photosystem I | 9.89E-04 |
| 20 | GO:0009523: photosystem II | 1.06E-03 |
| 21 | GO:0009501: amyloplast | 2.42E-03 |
| 22 | GO:0009539: photosystem II reaction center | 2.77E-03 |
| 23 | GO:0000307: cyclin-dependent protein kinase holoenzyme complex | 2.77E-03 |
| 24 | GO:0005777: peroxisome | 3.61E-03 |
| 25 | GO:0030076: light-harvesting complex | 6.06E-03 |
| 26 | GO:0042651: thylakoid membrane | 7.51E-03 |
| 27 | GO:0010287: plastoglobule | 7.69E-03 |
| 28 | GO:0005773: vacuole | 1.38E-02 |
| 29 | GO:0030529: intracellular ribonucleoprotein complex | 1.71E-02 |
| 30 | GO:0019005: SCF ubiquitin ligase complex | 2.06E-02 |
| 31 | GO:0031969: chloroplast membrane | 2.16E-02 |
| 32 | GO:0005840: ribosome | 3.42E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 4.65E-02 |