Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G15170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070979: protein K11-linked ubiquitination0.00E+00
2GO:0000455: enzyme-directed rRNA pseudouridine synthesis0.00E+00
3GO:0071000: response to magnetism0.00E+00
4GO:0009583: detection of light stimulus0.00E+00
5GO:0010203: response to very low fluence red light stimulus0.00E+00
6GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
7GO:0000372: Group I intron splicing0.00E+00
8GO:0033528: S-methylmethionine cycle0.00E+00
9GO:1905177: tracheary element differentiation0.00E+00
10GO:0006114: glycerol biosynthetic process0.00E+00
11GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
12GO:0006399: tRNA metabolic process0.00E+00
13GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
14GO:0000373: Group II intron splicing1.67E-05
15GO:0010207: photosystem II assembly6.96E-05
16GO:0016123: xanthophyll biosynthetic process9.62E-05
17GO:0045038: protein import into chloroplast thylakoid membrane9.62E-05
18GO:0009658: chloroplast organization1.14E-04
19GO:0009793: embryo development ending in seed dormancy1.43E-04
20GO:0051510: regulation of unidimensional cell growth2.48E-04
21GO:0000066: mitochondrial ornithine transport3.07E-04
22GO:1902458: positive regulation of stomatal opening3.07E-04
23GO:0006419: alanyl-tRNA aminoacylation3.07E-04
24GO:0015969: guanosine tetraphosphate metabolic process3.07E-04
25GO:0031426: polycistronic mRNA processing3.07E-04
26GO:0043266: regulation of potassium ion transport3.07E-04
27GO:1902025: nitrate import3.07E-04
28GO:0072387: flavin adenine dinucleotide metabolic process3.07E-04
29GO:0010201: response to continuous far red light stimulus by the high-irradiance response system3.07E-04
30GO:0043087: regulation of GTPase activity3.07E-04
31GO:2000021: regulation of ion homeostasis3.07E-04
32GO:0006436: tryptophanyl-tRNA aminoacylation3.07E-04
33GO:0070574: cadmium ion transmembrane transport3.07E-04
34GO:0090548: response to nitrate starvation3.07E-04
35GO:0048564: photosystem I assembly3.13E-04
36GO:0009638: phototropism5.47E-04
37GO:1903426: regulation of reactive oxygen species biosynthetic process6.71E-04
38GO:0010343: singlet oxygen-mediated programmed cell death6.71E-04
39GO:1901529: positive regulation of anion channel activity6.71E-04
40GO:0060359: response to ammonium ion6.71E-04
41GO:1900871: chloroplast mRNA modification6.71E-04
42GO:0010617: circadian regulation of calcium ion oscillation6.71E-04
43GO:0006435: threonyl-tRNA aminoacylation6.71E-04
44GO:0099402: plant organ development6.71E-04
45GO:1902448: positive regulation of shade avoidance1.09E-03
46GO:0031145: anaphase-promoting complex-dependent catabolic process1.09E-03
47GO:0017006: protein-tetrapyrrole linkage1.09E-03
48GO:0010623: programmed cell death involved in cell development1.09E-03
49GO:1901672: positive regulation of systemic acquired resistance1.09E-03
50GO:0006696: ergosterol biosynthetic process1.09E-03
51GO:0043157: response to cation stress1.09E-03
52GO:0005977: glycogen metabolic process1.09E-03
53GO:0090351: seedling development1.19E-03
54GO:0030071: regulation of mitotic metaphase/anaphase transition1.56E-03
55GO:0010239: chloroplast mRNA processing1.56E-03
56GO:0009584: detection of visible light1.56E-03
57GO:0009800: cinnamic acid biosynthetic process1.56E-03
58GO:0009226: nucleotide-sugar biosynthetic process1.56E-03
59GO:1901332: negative regulation of lateral root development1.56E-03
60GO:0042989: sequestering of actin monomers1.56E-03
61GO:2001141: regulation of RNA biosynthetic process1.56E-03
62GO:0051781: positive regulation of cell division2.09E-03
63GO:0048442: sepal development2.09E-03
64GO:0051322: anaphase2.09E-03
65GO:0006661: phosphatidylinositol biosynthetic process2.09E-03
66GO:0010508: positive regulation of autophagy2.09E-03
67GO:0008295: spermidine biosynthetic process2.09E-03
68GO:1902347: response to strigolactone2.09E-03
69GO:0010021: amylopectin biosynthetic process2.09E-03
70GO:0016117: carotenoid biosynthetic process2.50E-03
71GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.50E-03
72GO:0032876: negative regulation of DNA endoreduplication2.67E-03
73GO:0080110: sporopollenin biosynthetic process2.67E-03
74GO:0030041: actin filament polymerization2.67E-03
75GO:0010117: photoprotection2.67E-03
76GO:0046283: anthocyanin-containing compound metabolic process2.67E-03
77GO:0045489: pectin biosynthetic process2.91E-03
78GO:0046323: glucose import2.91E-03
79GO:0048316: seed development3.17E-03
80GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.30E-03
81GO:0009959: negative gravitropism3.30E-03
82GO:0060918: auxin transport3.30E-03
83GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.30E-03
84GO:1901371: regulation of leaf morphogenesis3.30E-03
85GO:0006559: L-phenylalanine catabolic process3.30E-03
86GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione3.30E-03
87GO:0009630: gravitropism3.83E-03
88GO:0007264: small GTPase mediated signal transduction3.83E-03
89GO:0010310: regulation of hydrogen peroxide metabolic process3.97E-03
90GO:0010076: maintenance of floral meristem identity3.97E-03
91GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.97E-03
92GO:0017148: negative regulation of translation3.97E-03
93GO:0009854: oxidative photosynthetic carbon pathway3.97E-03
94GO:0010161: red light signaling pathway4.68E-03
95GO:0009395: phospholipid catabolic process4.68E-03
96GO:0006400: tRNA modification4.68E-03
97GO:0009416: response to light stimulus5.04E-03
98GO:0042255: ribosome assembly5.44E-03
99GO:0032875: regulation of DNA endoreduplication5.44E-03
100GO:0006353: DNA-templated transcription, termination5.44E-03
101GO:0070413: trehalose metabolism in response to stress5.44E-03
102GO:0006875: cellular metal ion homeostasis5.44E-03
103GO:2000070: regulation of response to water deprivation5.44E-03
104GO:0045010: actin nucleation5.44E-03
105GO:0071482: cellular response to light stimulus6.23E-03
106GO:0009827: plant-type cell wall modification6.23E-03
107GO:0032544: plastid translation6.23E-03
108GO:0018298: protein-chromophore linkage6.77E-03
109GO:0046685: response to arsenic-containing substance7.07E-03
110GO:0090305: nucleic acid phosphodiester bond hydrolysis7.07E-03
111GO:0010206: photosystem II repair7.07E-03
112GO:0048507: meristem development7.07E-03
113GO:0010218: response to far red light7.47E-03
114GO:1900426: positive regulation of defense response to bacterium7.94E-03
115GO:0009086: methionine biosynthetic process7.94E-03
116GO:0008202: steroid metabolic process7.94E-03
117GO:0009853: photorespiration8.59E-03
118GO:0009637: response to blue light8.59E-03
119GO:0006259: DNA metabolic process8.84E-03
120GO:0048441: petal development8.84E-03
121GO:0006265: DNA topological change9.79E-03
122GO:0006352: DNA-templated transcription, initiation9.79E-03
123GO:0045037: protein import into chloroplast stroma1.08E-02
124GO:0009640: photomorphogenesis1.11E-02
125GO:0010114: response to red light1.11E-02
126GO:0055114: oxidation-reduction process1.15E-02
127GO:0010075: regulation of meristem growth1.18E-02
128GO:0009767: photosynthetic electron transport chain1.18E-02
129GO:0009785: blue light signaling pathway1.18E-02
130GO:0030036: actin cytoskeleton organization1.18E-02
131GO:0009644: response to high light intensity1.20E-02
132GO:0005975: carbohydrate metabolic process1.25E-02
133GO:0048440: carpel development1.28E-02
134GO:0030150: protein import into mitochondrial matrix1.62E-02
135GO:0007010: cytoskeleton organization1.62E-02
136GO:0006289: nucleotide-excision repair1.62E-02
137GO:2000377: regulation of reactive oxygen species metabolic process1.62E-02
138GO:0005992: trehalose biosynthetic process1.62E-02
139GO:0008299: isoprenoid biosynthetic process1.74E-02
140GO:0006418: tRNA aminoacylation for protein translation1.74E-02
141GO:0010073: meristem maintenance1.74E-02
142GO:0006825: copper ion transport1.74E-02
143GO:0015992: proton transport1.86E-02
144GO:0006508: proteolysis1.92E-02
145GO:0046777: protein autophosphorylation1.93E-02
146GO:0035428: hexose transmembrane transport1.98E-02
147GO:0006730: one-carbon metabolic process1.98E-02
148GO:0031348: negative regulation of defense response1.98E-02
149GO:0010089: xylem development2.24E-02
150GO:0010584: pollen exine formation2.24E-02
151GO:0048443: stamen development2.24E-02
152GO:0019722: calcium-mediated signaling2.24E-02
153GO:0009306: protein secretion2.24E-02
154GO:0010118: stomatal movement2.50E-02
155GO:0008033: tRNA processing2.50E-02
156GO:0010087: phloem or xylem histogenesis2.50E-02
157GO:0010268: brassinosteroid homeostasis2.64E-02
158GO:0042752: regulation of circadian rhythm2.78E-02
159GO:0007059: chromosome segregation2.78E-02
160GO:0009646: response to absence of light2.78E-02
161GO:0007018: microtubule-based movement2.78E-02
162GO:0009791: post-embryonic development2.92E-02
163GO:0019252: starch biosynthetic process2.92E-02
164GO:0008654: phospholipid biosynthetic process2.92E-02
165GO:0055072: iron ion homeostasis2.92E-02
166GO:0016132: brassinosteroid biosynthetic process3.07E-02
167GO:0032502: developmental process3.21E-02
168GO:0008152: metabolic process3.26E-02
169GO:0010090: trichome morphogenesis3.36E-02
170GO:0006413: translational initiation3.45E-02
171GO:0016125: sterol metabolic process3.52E-02
172GO:0019760: glucosinolate metabolic process3.52E-02
173GO:0007267: cell-cell signaling3.67E-02
174GO:0000910: cytokinesis3.83E-02
175GO:0016126: sterol biosynthetic process3.98E-02
176GO:0010027: thylakoid membrane organization3.98E-02
177GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.15E-02
178GO:0010029: regulation of seed germination4.15E-02
179GO:0007166: cell surface receptor signaling pathway4.22E-02
180GO:0048573: photoperiodism, flowering4.48E-02
181GO:0016311: dephosphorylation4.64E-02
182GO:0048481: plant ovule development4.81E-02
183GO:0030244: cellulose biosynthetic process4.81E-02
184GO:0071555: cell wall organization4.98E-02
RankGO TermAdjusted P value
1GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
2GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
3GO:0043136: glycerol-3-phosphatase activity0.00E+00
4GO:0000121: glycerol-1-phosphatase activity0.00E+00
5GO:0019144: ADP-sugar diphosphatase activity0.00E+00
6GO:0050613: delta14-sterol reductase activity0.00E+00
7GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
8GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
9GO:0046905: phytoene synthase activity0.00E+00
10GO:0004672: protein kinase activity1.13E-04
11GO:0005525: GTP binding3.06E-04
12GO:0016784: 3-mercaptopyruvate sulfurtransferase activity3.07E-04
13GO:0004451: isocitrate lyase activity3.07E-04
14GO:0016776: phosphotransferase activity, phosphate group as acceptor3.07E-04
15GO:0080042: ADP-glucose pyrophosphohydrolase activity3.07E-04
16GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity3.07E-04
17GO:0016618: hydroxypyruvate reductase activity3.07E-04
18GO:0004813: alanine-tRNA ligase activity3.07E-04
19GO:0005290: L-histidine transmembrane transporter activity3.07E-04
20GO:0004008: copper-exporting ATPase activity3.07E-04
21GO:0051996: squalene synthase activity3.07E-04
22GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.07E-04
23GO:0004830: tryptophan-tRNA ligase activity3.07E-04
24GO:0031516: far-red light photoreceptor activity3.07E-04
25GO:0043022: ribosome binding3.13E-04
26GO:0004518: nuclease activity4.42E-04
27GO:0009883: red or far-red light photoreceptor activity6.71E-04
28GO:0080041: ADP-ribose pyrophosphohydrolase activity6.71E-04
29GO:0004326: tetrahydrofolylpolyglutamate synthase activity6.71E-04
30GO:0009977: proton motive force dependent protein transmembrane transporter activity6.71E-04
31GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity6.71E-04
32GO:0004766: spermidine synthase activity6.71E-04
33GO:0004829: threonine-tRNA ligase activity6.71E-04
34GO:0019156: isoamylase activity6.71E-04
35GO:0000064: L-ornithine transmembrane transporter activity6.71E-04
36GO:0008728: GTP diphosphokinase activity6.71E-04
37GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.71E-04
38GO:0048531: beta-1,3-galactosyltransferase activity6.71E-04
39GO:0010291: carotene beta-ring hydroxylase activity6.71E-04
40GO:0004222: metalloendopeptidase activity1.03E-03
41GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.07E-03
42GO:0004180: carboxypeptidase activity1.09E-03
43GO:0045548: phenylalanine ammonia-lyase activity1.09E-03
44GO:0032549: ribonucleoside binding1.09E-03
45GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.09E-03
46GO:0004148: dihydrolipoyl dehydrogenase activity1.09E-03
47GO:0008020: G-protein coupled photoreceptor activity1.09E-03
48GO:0030267: glyoxylate reductase (NADP) activity1.09E-03
49GO:0016805: dipeptidase activity1.09E-03
50GO:0070402: NADPH binding1.09E-03
51GO:0015144: carbohydrate transmembrane transporter activity1.23E-03
52GO:0005351: sugar:proton symporter activity1.47E-03
53GO:0015189: L-lysine transmembrane transporter activity1.56E-03
54GO:0005354: galactose transmembrane transporter activity1.56E-03
55GO:0048027: mRNA 5'-UTR binding1.56E-03
56GO:0009678: hydrogen-translocating pyrophosphatase activity1.56E-03
57GO:0015086: cadmium ion transmembrane transporter activity1.56E-03
58GO:0004792: thiosulfate sulfurtransferase activity1.56E-03
59GO:0015181: arginine transmembrane transporter activity1.56E-03
60GO:0017172: cysteine dioxygenase activity1.56E-03
61GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.56E-03
62GO:0009882: blue light photoreceptor activity1.56E-03
63GO:0046872: metal ion binding1.61E-03
64GO:0003924: GTPase activity1.84E-03
65GO:0001053: plastid sigma factor activity2.09E-03
66GO:0016987: sigma factor activity2.09E-03
67GO:0070628: proteasome binding2.09E-03
68GO:0052793: pectin acetylesterase activity2.09E-03
69GO:0042277: peptide binding2.09E-03
70GO:0003785: actin monomer binding2.67E-03
71GO:0005471: ATP:ADP antiporter activity2.67E-03
72GO:0005355: glucose transmembrane transporter activity3.13E-03
73GO:0031593: polyubiquitin binding3.30E-03
74GO:0004556: alpha-amylase activity3.30E-03
75GO:0004462: lactoylglutathione lyase activity3.30E-03
76GO:0009927: histidine phosphotransfer kinase activity3.97E-03
77GO:0004656: procollagen-proline 4-dioxygenase activity3.97E-03
78GO:0004427: inorganic diphosphatase activity4.68E-03
79GO:0015103: inorganic anion transmembrane transporter activity4.68E-03
80GO:0008142: oxysterol binding6.23E-03
81GO:0005375: copper ion transmembrane transporter activity6.23E-03
82GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity6.23E-03
83GO:0008236: serine-type peptidase activity6.44E-03
84GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.07E-03
85GO:0071949: FAD binding7.07E-03
86GO:0004673: protein histidine kinase activity8.84E-03
87GO:0004805: trehalose-phosphatase activity8.84E-03
88GO:0016491: oxidoreductase activity9.47E-03
89GO:0001054: RNA polymerase I activity9.79E-03
90GO:0042802: identical protein binding1.05E-02
91GO:0000049: tRNA binding1.08E-02
92GO:0000155: phosphorelay sensor kinase activity1.18E-02
93GO:0009982: pseudouridine synthase activity1.18E-02
94GO:0008081: phosphoric diester hydrolase activity1.18E-02
95GO:0015266: protein channel activity1.18E-02
96GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.18E-02
97GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.50E-02
98GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.50E-02
99GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.50E-02
100GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.50E-02
101GO:0003690: double-stranded DNA binding1.55E-02
102GO:0031418: L-ascorbic acid binding1.62E-02
103GO:0043130: ubiquitin binding1.62E-02
104GO:0003727: single-stranded RNA binding2.24E-02
105GO:0004871: signal transducer activity2.36E-02
106GO:0042803: protein homodimerization activity2.36E-02
107GO:0004812: aminoacyl-tRNA ligase activity2.37E-02
108GO:0016787: hydrolase activity2.40E-02
109GO:0008536: Ran GTPase binding2.64E-02
110GO:0046873: metal ion transmembrane transporter activity2.64E-02
111GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.68E-02
112GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.75E-02
113GO:0016853: isomerase activity2.78E-02
114GO:0050662: coenzyme binding2.78E-02
115GO:0010181: FMN binding2.78E-02
116GO:0003723: RNA binding2.86E-02
117GO:0019901: protein kinase binding2.92E-02
118GO:0048038: quinone binding3.07E-02
119GO:0003684: damaged DNA binding3.52E-02
120GO:0016791: phosphatase activity3.52E-02
121GO:0008237: metallopeptidase activity3.67E-02
122GO:0016413: O-acetyltransferase activity3.83E-02
123GO:0016597: amino acid binding3.83E-02
124GO:0008017: microtubule binding3.86E-02
125GO:0003743: translation initiation factor activity4.31E-02
126GO:0005524: ATP binding4.35E-02
127GO:0004721: phosphoprotein phosphatase activity4.48E-02
128GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.81E-02
129GO:0005506: iron ion binding4.87E-02
130GO:0005515: protein binding4.92E-02
131GO:0005096: GTPase activator activity4.98E-02
RankGO TermAdjusted P value
1GO:0010368: chloroplast isoamylase complex0.00E+00
2GO:0009507: chloroplast8.56E-16
3GO:0016604: nuclear body2.24E-05
4GO:0009535: chloroplast thylakoid membrane4.29E-04
5GO:0009570: chloroplast stroma5.88E-04
6GO:0080085: signal recognition particle, chloroplast targeting6.71E-04
7GO:0009574: preprophase band9.50E-04
8GO:0033281: TAT protein transport complex1.09E-03
9GO:0016605: PML body1.09E-03
10GO:0030663: COPI-coated vesicle membrane2.09E-03
11GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)2.09E-03
12GO:0009536: plastid2.69E-03
13GO:0031209: SCAR complex3.30E-03
14GO:0009706: chloroplast inner membrane3.85E-03
15GO:0031969: chloroplast membrane4.14E-03
16GO:0030529: intracellular ribonucleoprotein complex5.19E-03
17GO:0009501: amyloplast5.44E-03
18GO:0031305: integral component of mitochondrial inner membrane5.44E-03
19GO:0005786: signal recognition particle, endoplasmic reticulum targeting6.23E-03
20GO:0005736: DNA-directed RNA polymerase I complex7.07E-03
21GO:0042644: chloroplast nucleoid7.07E-03
22GO:0005680: anaphase-promoting complex7.07E-03
23GO:0030125: clathrin vesicle coat8.84E-03
24GO:0005578: proteinaceous extracellular matrix1.18E-02
25GO:0005938: cell cortex1.18E-02
26GO:0030176: integral component of endoplasmic reticulum membrane1.39E-02
27GO:0042651: thylakoid membrane1.74E-02
28GO:0009532: plastid stroma1.86E-02
29GO:0009941: chloroplast envelope1.99E-02
30GO:0015629: actin cytoskeleton2.11E-02
31GO:0005744: mitochondrial inner membrane presequence translocase complex2.24E-02
32GO:0005871: kinesin complex2.37E-02
33GO:0010287: plastoglobule2.54E-02
34GO:0005623: cell2.75E-02
35GO:0005759: mitochondrial matrix3.36E-02
36GO:0009295: nucleoid3.67E-02
37GO:0005622: intracellular4.14E-02
38GO:0046658: anchored component of plasma membrane4.87E-02
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Gene type



Gene DE type