co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G14970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042821: pyridoxal biosynthetic process	0.00E+00
2	GO:0042820: vitamin B6 catabolic process	0.00E+00
3	GO:0015882: L-ascorbic acid transport	0.00E+00
4	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
5	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
6	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
7	GO:0008298: intracellular mRNA localization	0.00E+00
8	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
9	GO:0071474: cellular hyperosmotic response	0.00E+00
10	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
11	GO:0043488: regulation of mRNA stability	0.00E+00
12	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
13	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
14	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
15	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
16	GO:0090279: regulation of calcium ion import	0.00E+00
17	GO:0009658: chloroplast organization	5.83E-08
18	GO:0005977: glycogen metabolic process	1.35E-05
19	GO:0010239: chloroplast mRNA processing	3.03E-05
20	GO:0010021: amylopectin biosynthetic process	5.45E-05
21	GO:0045038: protein import into chloroplast thylakoid membrane	8.61E-05
22	GO:0031426: polycistronic mRNA processing	2.87E-04
23	GO:0043266: regulation of potassium ion transport	2.87E-04
24	GO:0051775: response to redox state	2.87E-04
25	GO:0010063: positive regulation of trichoblast fate specification	2.87E-04
26	GO:0043686: co-translational protein modification	2.87E-04
27	GO:2000021: regulation of ion homeostasis	2.87E-04
28	GO:0070574: cadmium ion transmembrane transport	2.87E-04
29	GO:0051247: positive regulation of protein metabolic process	2.87E-04
30	GO:1902458: positive regulation of stomatal opening	2.87E-04
31	GO:0010028: xanthophyll cycle	2.87E-04
32	GO:2000905: negative regulation of starch metabolic process	2.87E-04
33	GO:0000476: maturation of 4.5S rRNA	2.87E-04
34	GO:0009443: pyridoxal 5'-phosphate salvage	2.87E-04
35	GO:0000967: rRNA 5'-end processing	2.87E-04
36	GO:0019252: starch biosynthetic process	3.27E-04
37	GO:0005975: carbohydrate metabolic process	3.47E-04
38	GO:0018026: peptidyl-lysine monomethylation	6.30E-04
39	GO:0000256: allantoin catabolic process	6.30E-04
40	GO:1904143: positive regulation of carotenoid biosynthetic process	6.30E-04
41	GO:1903426: regulation of reactive oxygen species biosynthetic process	6.30E-04
42	GO:0051262: protein tetramerization	6.30E-04
43	GO:0034470: ncRNA processing	6.30E-04
44	GO:1900871: chloroplast mRNA modification	6.30E-04
45	GO:0043085: positive regulation of catalytic activity	6.69E-04
46	GO:0009773: photosynthetic electron transport in photosystem I	6.69E-04
47	GO:0010136: ureide catabolic process	1.02E-03
48	GO:0015940: pantothenate biosynthetic process	1.02E-03
49	GO:0048586: regulation of long-day photoperiodism, flowering	1.02E-03
50	GO:0006954: inflammatory response	1.02E-03
51	GO:0019853: L-ascorbic acid biosynthetic process	1.09E-03
52	GO:0034599: cellular response to oxidative stress	1.14E-03
53	GO:0016556: mRNA modification	1.46E-03
54	GO:0090308: regulation of methylation-dependent chromatin silencing	1.46E-03
55	GO:0010071: root meristem specification	1.46E-03
56	GO:0009152: purine ribonucleotide biosynthetic process	1.46E-03
57	GO:0046653: tetrahydrofolate metabolic process	1.46E-03
58	GO:0006107: oxaloacetate metabolic process	1.46E-03
59	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.46E-03
60	GO:0006145: purine nucleobase catabolic process	1.46E-03
61	GO:0051016: barbed-end actin filament capping	1.46E-03
62	GO:0007017: microtubule-based process	1.47E-03
63	GO:0006021: inositol biosynthetic process	1.96E-03
64	GO:0006734: NADH metabolic process	1.96E-03
65	GO:0010037: response to carbon dioxide	1.96E-03
66	GO:0015976: carbon utilization	1.96E-03
67	GO:0009765: photosynthesis, light harvesting	1.96E-03
68	GO:2000306: positive regulation of photomorphogenesis	1.96E-03
69	GO:0006109: regulation of carbohydrate metabolic process	1.96E-03
70	GO:2000122: negative regulation of stomatal complex development	1.96E-03
71	GO:0032543: mitochondrial translation	2.50E-03
72	GO:0006564: L-serine biosynthetic process	2.50E-03
73	GO:0031365: N-terminal protein amino acid modification	2.50E-03
74	GO:0080110: sporopollenin biosynthetic process	2.50E-03
75	GO:0006662: glycerol ether metabolic process	2.64E-03
76	GO:0032973: amino acid export	3.08E-03
77	GO:0000741: karyogamy	3.08E-03
78	GO:0046855: inositol phosphate dephosphorylation	3.08E-03
79	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	3.08E-03
80	GO:0050665: hydrogen peroxide biosynthetic process	3.08E-03
81	GO:0032502: developmental process	3.48E-03
82	GO:0048280: vesicle fusion with Golgi apparatus	3.71E-03
83	GO:1901259: chloroplast rRNA processing	3.71E-03
84	GO:0010189: vitamin E biosynthetic process	3.71E-03
85	GO:0009854: oxidative photosynthetic carbon pathway	3.71E-03
86	GO:0010019: chloroplast-nucleus signaling pathway	3.71E-03
87	GO:0009416: response to light stimulus	4.24E-03
88	GO:0015979: photosynthesis	4.35E-03
89	GO:0009772: photosynthetic electron transport in photosystem II	4.38E-03
90	GO:0043090: amino acid import	4.38E-03
91	GO:1900056: negative regulation of leaf senescence	4.38E-03
92	GO:0051693: actin filament capping	4.38E-03
93	GO:0048437: floral organ development	4.38E-03
94	GO:0010027: thylakoid membrane organization	4.70E-03
95	GO:0009690: cytokinin metabolic process	5.08E-03
96	GO:0010078: maintenance of root meristem identity	5.08E-03
97	GO:0006875: cellular metal ion homeostasis	5.08E-03
98	GO:2000070: regulation of response to water deprivation	5.08E-03
99	GO:0015995: chlorophyll biosynthetic process	5.54E-03
100	GO:0009657: plastid organization	5.82E-03
101	GO:0010204: defense response signaling pathway, resistance gene-independent	5.82E-03
102	GO:0032544: plastid translation	5.82E-03
103	GO:0043562: cellular response to nitrogen levels	5.82E-03
104	GO:0017004: cytochrome complex assembly	5.82E-03
105	GO:0015996: chlorophyll catabolic process	5.82E-03
106	GO:0007186: G-protein coupled receptor signaling pathway	5.82E-03
107	GO:0018298: protein-chromophore linkage	6.14E-03
108	GO:0048507: meristem development	6.60E-03
109	GO:0000902: cell morphogenesis	6.60E-03
110	GO:0098656: anion transmembrane transport	6.60E-03
111	GO:0009051: pentose-phosphate shunt, oxidative branch	6.60E-03
112	GO:0080144: amino acid homeostasis	6.60E-03
113	GO:0010380: regulation of chlorophyll biosynthetic process	7.41E-03
114	GO:0009638: phototropism	7.41E-03
115	GO:0006896: Golgi to vacuole transport	8.26E-03
116	GO:0006415: translational termination	9.14E-03
117	GO:0010216: maintenance of DNA methylation	9.14E-03
118	GO:0009684: indoleacetic acid biosynthetic process	9.14E-03
119	GO:0019684: photosynthesis, light reaction	9.14E-03
120	GO:0009089: lysine biosynthetic process via diaminopimelate	9.14E-03
121	GO:0072593: reactive oxygen species metabolic process	9.14E-03
122	GO:0045037: protein import into chloroplast stroma	1.01E-02
123	GO:0006790: sulfur compound metabolic process	1.01E-02
124	GO:0010628: positive regulation of gene expression	1.10E-02
125	GO:0006108: malate metabolic process	1.10E-02
126	GO:0030036: actin cytoskeleton organization	1.10E-02
127	GO:0009718: anthocyanin-containing compound biosynthetic process	1.10E-02
128	GO:0009767: photosynthetic electron transport chain	1.10E-02
129	GO:0010588: cotyledon vascular tissue pattern formation	1.10E-02
130	GO:0007015: actin filament organization	1.20E-02
131	GO:0048467: gynoecium development	1.20E-02
132	GO:0010207: photosystem II assembly	1.20E-02
133	GO:0010030: positive regulation of seed germination	1.30E-02
134	GO:0046854: phosphatidylinositol phosphorylation	1.30E-02
135	GO:0055114: oxidation-reduction process	1.54E-02
136	GO:0006418: tRNA aminoacylation for protein translation	1.62E-02
137	GO:0048367: shoot system development	1.66E-02
138	GO:0019748: secondary metabolic process	1.85E-02
139	GO:0009686: gibberellin biosynthetic process	1.96E-02
140	GO:0006012: galactose metabolic process	1.96E-02
141	GO:0042127: regulation of cell proliferation	2.08E-02
142	GO:0009306: protein secretion	2.08E-02
143	GO:0010584: pollen exine formation	2.08E-02
144	GO:0055085: transmembrane transport	2.19E-02
145	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.21E-02
146	GO:0042147: retrograde transport, endosome to Golgi	2.21E-02
147	GO:0080022: primary root development	2.33E-02
148	GO:0010087: phloem or xylem histogenesis	2.33E-02
149	GO:0042631: cellular response to water deprivation	2.33E-02
150	GO:0009409: response to cold	2.42E-02
151	GO:0010305: leaf vascular tissue pattern formation	2.46E-02
152	GO:0010197: polar nucleus fusion	2.46E-02
153	GO:0010182: sugar mediated signaling pathway	2.46E-02
154	GO:0009741: response to brassinosteroid	2.46E-02
155	GO:0010268: brassinosteroid homeostasis	2.46E-02
156	GO:0009958: positive gravitropism	2.46E-02
157	GO:0006520: cellular amino acid metabolic process	2.46E-02
158	GO:0015986: ATP synthesis coupled proton transport	2.59E-02
159	GO:0009646: response to absence of light	2.59E-02
160	GO:0048825: cotyledon development	2.72E-02
161	GO:0008654: phospholipid biosynthetic process	2.72E-02
162	GO:0055072: iron ion homeostasis	2.72E-02
163	GO:0009851: auxin biosynthetic process	2.72E-02
164	GO:0006623: protein targeting to vacuole	2.72E-02
165	GO:0009791: post-embryonic development	2.72E-02
166	GO:0006891: intra-Golgi vesicle-mediated transport	2.86E-02
167	GO:0016132: brassinosteroid biosynthetic process	2.86E-02
168	GO:1901657: glycosyl compound metabolic process	3.13E-02
169	GO:0016125: sterol metabolic process	3.28E-02
170	GO:0009451: RNA modification	3.43E-02
171	GO:0010029: regulation of seed germination	3.86E-02
172	GO:0008380: RNA splicing	3.99E-02
173	GO:0010468: regulation of gene expression	3.99E-02
174	GO:0006888: ER to Golgi vesicle-mediated transport	4.17E-02
175	GO:0016311: dephosphorylation	4.33E-02
176	GO:0048481: plant ovule development	4.49E-02
177	GO:0009910: negative regulation of flower development	4.97E-02
178	GO:0048527: lateral root development	4.97E-02
179	GO:0010119: regulation of stomatal movement	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0010276: phytol kinase activity	0.00E+00
2	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
3	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
4	GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives	0.00E+00
5	GO:0004823: leucine-tRNA ligase activity	0.00E+00
6	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
7	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
8	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
9	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
10	GO:0036361: racemase activity, acting on amino acids and derivatives	0.00E+00
11	GO:0019156: isoamylase activity	3.77E-06
12	GO:0019899: enzyme binding	4.66E-06
13	GO:0043495: protein anchor	5.45E-05
14	GO:0004556: alpha-amylase activity	1.25E-04
15	GO:0004033: aldo-keto reductase (NADP) activity	2.83E-04
16	GO:0042586: peptide deformylase activity	2.87E-04
17	GO:0005080: protein kinase C binding	2.87E-04
18	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.87E-04
19	GO:0008746: NAD(P)+ transhydrogenase activity	2.87E-04
20	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.87E-04
21	GO:0046906: tetrapyrrole binding	2.87E-04
22	GO:0005227: calcium activated cation channel activity	2.87E-04
23	GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity	2.87E-04
24	GO:0016776: phosphotransferase activity, phosphate group as acceptor	2.87E-04
25	GO:0051777: ent-kaurenoate oxidase activity	2.87E-04
26	GO:0004856: xylulokinase activity	2.87E-04
27	GO:0080042: ADP-glucose pyrophosphohydrolase activity	2.87E-04
28	GO:0052833: inositol monophosphate 4-phosphatase activity	6.30E-04
29	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	6.30E-04
30	GO:0004103: choline kinase activity	6.30E-04
31	GO:0080041: ADP-ribose pyrophosphohydrolase activity	6.30E-04
32	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	6.30E-04
33	GO:0004617: phosphoglycerate dehydrogenase activity	6.30E-04
34	GO:0052832: inositol monophosphate 3-phosphatase activity	6.30E-04
35	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	6.30E-04
36	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	6.30E-04
37	GO:0008934: inositol monophosphate 1-phosphatase activity	6.30E-04
38	GO:0004848: ureidoglycolate hydrolase activity	1.02E-03
39	GO:0004751: ribose-5-phosphate isomerase activity	1.02E-03
40	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.02E-03
41	GO:0070402: NADPH binding	1.02E-03
42	GO:0008864: formyltetrahydrofolate deformylase activity	1.02E-03
43	GO:0003913: DNA photolyase activity	1.02E-03
44	GO:0002161: aminoacyl-tRNA editing activity	1.02E-03
45	GO:0003993: acid phosphatase activity	1.14E-03
46	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	1.46E-03
47	GO:0017057: 6-phosphogluconolactonase activity	1.46E-03
48	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	1.46E-03
49	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	1.46E-03
50	GO:0048027: mRNA 5'-UTR binding	1.46E-03
51	GO:0015086: cadmium ion transmembrane transporter activity	1.46E-03
52	GO:0022891: substrate-specific transmembrane transporter activity	1.93E-03
53	GO:0008891: glycolate oxidase activity	1.96E-03
54	GO:0016279: protein-lysine N-methyltransferase activity	1.96E-03
55	GO:0004045: aminoacyl-tRNA hydrolase activity	1.96E-03
56	GO:0080032: methyl jasmonate esterase activity	1.96E-03
57	GO:0009011: starch synthase activity	1.96E-03
58	GO:0047134: protein-disulfide reductase activity	2.27E-03
59	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.50E-03
60	GO:0016846: carbon-sulfur lyase activity	2.50E-03
61	GO:0008080: N-acetyltransferase activity	2.64E-03
62	GO:0004791: thioredoxin-disulfide reductase activity	2.84E-03
63	GO:0004462: lactoylglutathione lyase activity	3.08E-03
64	GO:0016615: malate dehydrogenase activity	3.08E-03
65	GO:0008200: ion channel inhibitor activity	3.08E-03
66	GO:0004605: phosphatidate cytidylyltransferase activity	3.08E-03
67	GO:0080030: methyl indole-3-acetate esterase activity	3.08E-03
68	GO:0030060: L-malate dehydrogenase activity	3.71E-03
69	GO:0005261: cation channel activity	3.71E-03
70	GO:0003730: mRNA 3'-UTR binding	3.71E-03
71	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	3.71E-03
72	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.71E-03
73	GO:0008195: phosphatidate phosphatase activity	3.71E-03
74	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.71E-03
75	GO:0005200: structural constituent of cytoskeleton	4.19E-03
76	GO:0015103: inorganic anion transmembrane transporter activity	4.38E-03
77	GO:0016168: chlorophyll binding	4.97E-03
78	GO:0003824: catalytic activity	5.47E-03
79	GO:0003747: translation release factor activity	6.60E-03
80	GO:0016491: oxidoreductase activity	7.81E-03
81	GO:0008047: enzyme activator activity	8.26E-03
82	GO:0015020: glucuronosyltransferase activity	8.26E-03
83	GO:0004712: protein serine/threonine/tyrosine kinase activity	8.50E-03
84	GO:0008559: xenobiotic-transporting ATPase activity	9.14E-03
85	GO:0042802: identical protein binding	9.25E-03
86	GO:0004185: serine-type carboxypeptidase activity	1.01E-02
87	GO:0005315: inorganic phosphate transmembrane transporter activity	1.10E-02
88	GO:0004089: carbonate dehydratase activity	1.10E-02
89	GO:0031072: heat shock protein binding	1.10E-02
90	GO:0009982: pseudouridine synthase activity	1.10E-02
91	GO:0003725: double-stranded RNA binding	1.10E-02
92	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.20E-02
93	GO:0004857: enzyme inhibitor activity	1.51E-02
94	GO:0005528: FK506 binding	1.51E-02
95	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.66E-02
96	GO:0015035: protein disulfide oxidoreductase activity	2.00E-02
97	GO:0008514: organic anion transmembrane transporter activity	2.08E-02
98	GO:0004812: aminoacyl-tRNA ligase activity	2.21E-02
99	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.46E-02
100	GO:0046873: metal ion transmembrane transporter activity	2.46E-02
101	GO:0003924: GTPase activity	2.56E-02
102	GO:0050662: coenzyme binding	2.59E-02
103	GO:0010181: FMN binding	2.59E-02
104	GO:0004519: endonuclease activity	2.84E-02
105	GO:0048038: quinone binding	2.86E-02
106	GO:0008565: protein transporter activity	2.91E-02
107	GO:0005525: GTP binding	3.21E-02
108	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.42E-02
109	GO:0008237: metallopeptidase activity	3.42E-02
110	GO:0016597: amino acid binding	3.57E-02
111	GO:0008375: acetylglucosaminyltransferase activity	4.02E-02
112	GO:0102483: scopolin beta-glucosidase activity	4.17E-02
113	GO:0004721: phosphoprotein phosphatase activity	4.17E-02
114	GO:0015238: drug transmembrane transporter activity	4.65E-02
115	GO:0004222: metalloendopeptidase activity	4.81E-02
116	GO:0003723: RNA binding	4.83E-02
117	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	1.82E-25
3	GO:0009570: chloroplast stroma	4.24E-10
4	GO:0009535: chloroplast thylakoid membrane	5.96E-07
5	GO:0009941: chloroplast envelope	3.66E-04
6	GO:0010319: stromule	4.97E-04
7	GO:0080085: signal recognition particle, chloroplast targeting	6.30E-04
8	GO:0000778: condensed nuclear chromosome kinetochore	6.30E-04
9	GO:0008290: F-actin capping protein complex	6.30E-04
10	GO:0009528: plastid inner membrane	1.02E-03
11	GO:0033281: TAT protein transport complex	1.02E-03
12	GO:0030658: transport vesicle membrane	1.46E-03
13	GO:0015630: microtubule cytoskeleton	1.46E-03
14	GO:0042651: thylakoid membrane	1.47E-03
15	GO:0009527: plastid outer membrane	1.96E-03
16	GO:0009523: photosystem II	3.04E-03
17	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	3.08E-03
18	GO:0009706: chloroplast inner membrane	3.40E-03
19	GO:0031969: chloroplast membrane	3.56E-03
20	GO:0012507: ER to Golgi transport vesicle membrane	5.08E-03
21	GO:0009501: amyloplast	5.08E-03
22	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	5.82E-03
23	GO:0042644: chloroplast nucleoid	6.60E-03
24	GO:0045298: tubulin complex	6.60E-03
25	GO:0005720: nuclear heterochromatin	6.60E-03
26	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.60E-03
27	GO:0005773: vacuole	8.80E-03
28	GO:0005884: actin filament	9.14E-03
29	GO:0009508: plastid chromosome	1.10E-02
30	GO:0016021: integral component of membrane	1.47E-02
31	GO:0009532: plastid stroma	1.73E-02
32	GO:0009534: chloroplast thylakoid	2.03E-02
33	GO:0009536: plastid	2.05E-02
34	GO:0005886: plasma membrane	2.10E-02
35	GO:0009522: photosystem I	2.59E-02
36	GO:0043231: intracellular membrane-bounded organelle	2.89E-02
37	GO:0009705: plant-type vacuole membrane	3.35E-02
38	GO:0009295: nucleoid	3.42E-02
39	GO:0030529: intracellular ribonucleoprotein complex	3.72E-02
40	GO:0009707: chloroplast outer membrane	4.49E-02
41	GO:0000325: plant-type vacuole	4.97E-02