co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G14260

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0080127: fruit septum development	0.00E+00
3	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
4	GO:0010158: abaxial cell fate specification	7.43E-05
5	GO:0009926: auxin polar transport	1.62E-04
6	GO:0034757: negative regulation of iron ion transport	2.63E-04
7	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	2.63E-04
8	GO:0043087: regulation of GTPase activity	2.63E-04
9	GO:0043609: regulation of carbon utilization	2.63E-04
10	GO:0006436: tryptophanyl-tRNA aminoacylation	2.63E-04
11	GO:0000066: mitochondrial ornithine transport	2.63E-04
12	GO:0000373: Group II intron splicing	3.70E-04
13	GO:0009734: auxin-activated signaling pathway	5.52E-04
14	GO:0010024: phytochromobilin biosynthetic process	5.78E-04
15	GO:0080005: photosystem stoichiometry adjustment	5.78E-04
16	GO:0010271: regulation of chlorophyll catabolic process	5.78E-04
17	GO:0001736: establishment of planar polarity	5.78E-04
18	GO:0009750: response to fructose	5.92E-04
19	GO:0045037: protein import into chloroplast stroma	6.76E-04
20	GO:0010582: floral meristem determinacy	6.76E-04
21	GO:0010540: basipetal auxin transport	8.62E-04
22	GO:0006000: fructose metabolic process	9.39E-04
23	GO:0080117: secondary growth	9.39E-04
24	GO:0030029: actin filament-based process	9.39E-04
25	GO:0009744: response to sucrose	1.26E-03
26	GO:0051639: actin filament network formation	1.34E-03
27	GO:0034059: response to anoxia	1.34E-03
28	GO:0044211: CTP salvage	1.34E-03
29	GO:0009733: response to auxin	1.34E-03
30	GO:0009800: cinnamic acid biosynthetic process	1.34E-03
31	GO:2000904: regulation of starch metabolic process	1.34E-03
32	GO:0051513: regulation of monopolar cell growth	1.34E-03
33	GO:0051781: positive regulation of cell division	1.79E-03
34	GO:0051764: actin crosslink formation	1.79E-03
35	GO:0044206: UMP salvage	1.79E-03
36	GO:0015846: polyamine transport	1.79E-03
37	GO:0009956: radial pattern formation	1.79E-03
38	GO:0080110: sporopollenin biosynthetic process	2.29E-03
39	GO:1902183: regulation of shoot apical meristem development	2.29E-03
40	GO:0009958: positive gravitropism	2.32E-03
41	GO:0048316: seed development	2.37E-03
42	GO:0009749: response to glucose	2.68E-03
43	GO:0016554: cytidine to uridine editing	2.82E-03
44	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.82E-03
45	GO:0006559: L-phenylalanine catabolic process	2.82E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	2.82E-03
47	GO:0048831: regulation of shoot system development	2.82E-03
48	GO:0003006: developmental process involved in reproduction	2.82E-03
49	GO:0048827: phyllome development	2.82E-03
50	GO:0080167: response to karrikin	2.92E-03
51	GO:0010583: response to cyclopentenone	3.06E-03
52	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	3.40E-03
53	GO:0009942: longitudinal axis specification	3.40E-03
54	GO:0048509: regulation of meristem development	3.40E-03
55	GO:0010019: chloroplast-nucleus signaling pathway	3.40E-03
56	GO:0048444: floral organ morphogenesis	3.40E-03
57	GO:0006955: immune response	4.00E-03
58	GO:0010050: vegetative phase change	4.00E-03
59	GO:0000082: G1/S transition of mitotic cell cycle	4.00E-03
60	GO:0010444: guard mother cell differentiation	4.00E-03
61	GO:0009610: response to symbiotic fungus	4.00E-03
62	GO:0009911: positive regulation of flower development	4.14E-03
63	GO:0046620: regulation of organ growth	4.65E-03
64	GO:0006353: DNA-templated transcription, termination	4.65E-03
65	GO:0009850: auxin metabolic process	4.65E-03
66	GO:0010411: xyloglucan metabolic process	4.87E-03
67	GO:0006002: fructose 6-phosphate metabolic process	5.32E-03
68	GO:0007186: G-protein coupled receptor signaling pathway	5.32E-03
69	GO:0009657: plastid organization	5.32E-03
70	GO:0007389: pattern specification process	5.32E-03
71	GO:0000160: phosphorelay signal transduction system	5.67E-03
72	GO:0009451: RNA modification	5.95E-03
73	GO:0006098: pentose-phosphate shunt	6.03E-03
74	GO:0048507: meristem development	6.03E-03
75	GO:0090305: nucleic acid phosphodiester bond hydrolysis	6.03E-03
76	GO:2000024: regulation of leaf development	6.03E-03
77	GO:0046916: cellular transition metal ion homeostasis	6.03E-03
78	GO:1900865: chloroplast RNA modification	6.77E-03
79	GO:0042761: very long-chain fatty acid biosynthetic process	6.77E-03
80	GO:0016571: histone methylation	6.77E-03
81	GO:0008202: steroid metabolic process	6.77E-03
82	GO:0016573: histone acetylation	6.77E-03
83	GO:0019538: protein metabolic process	7.54E-03
84	GO:0006535: cysteine biosynthetic process from serine	7.54E-03
85	GO:0048829: root cap development	7.54E-03
86	GO:0048765: root hair cell differentiation	8.35E-03
87	GO:0051707: response to other organism	8.82E-03
88	GO:0042546: cell wall biogenesis	9.18E-03
89	GO:0009965: leaf morphogenesis	9.92E-03
90	GO:0010229: inflorescence development	1.00E-02
91	GO:0006094: gluconeogenesis	1.00E-02
92	GO:0048467: gynoecium development	1.09E-02
93	GO:0010020: chloroplast fission	1.09E-02
94	GO:0009933: meristem structural organization	1.09E-02
95	GO:0009266: response to temperature stimulus	1.09E-02
96	GO:0009934: regulation of meristem structural organization	1.09E-02
97	GO:0009825: multidimensional cell growth	1.18E-02
98	GO:0009736: cytokinin-activated signaling pathway	1.19E-02
99	GO:0010025: wax biosynthetic process	1.28E-02
100	GO:0006863: purine nucleobase transport	1.28E-02
101	GO:0019344: cysteine biosynthetic process	1.38E-02
102	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.38E-02
103	GO:0006338: chromatin remodeling	1.38E-02
104	GO:0009944: polarity specification of adaxial/abaxial axis	1.38E-02
105	GO:0051017: actin filament bundle assembly	1.38E-02
106	GO:0006289: nucleotide-excision repair	1.38E-02
107	GO:0006096: glycolytic process	1.41E-02
108	GO:0051302: regulation of cell division	1.48E-02
109	GO:0006418: tRNA aminoacylation for protein translation	1.48E-02
110	GO:0003333: amino acid transmembrane transport	1.58E-02
111	GO:0016998: cell wall macromolecule catabolic process	1.58E-02
112	GO:0035428: hexose transmembrane transport	1.68E-02
113	GO:0016226: iron-sulfur cluster assembly	1.68E-02
114	GO:0071215: cellular response to abscisic acid stimulus	1.79E-02
115	GO:0051726: regulation of cell cycle	1.80E-02
116	GO:0010584: pollen exine formation	1.90E-02
117	GO:0006284: base-excision repair	1.90E-02
118	GO:0042127: regulation of cell proliferation	1.90E-02
119	GO:0070417: cellular response to cold	2.01E-02
120	GO:0010087: phloem or xylem histogenesis	2.13E-02
121	GO:0010154: fruit development	2.24E-02
122	GO:0010305: leaf vascular tissue pattern formation	2.24E-02
123	GO:0048868: pollen tube development	2.24E-02
124	GO:0046323: glucose import	2.24E-02
125	GO:0009741: response to brassinosteroid	2.24E-02
126	GO:0048544: recognition of pollen	2.36E-02
127	GO:0048825: cotyledon development	2.48E-02
128	GO:0002229: defense response to oomycetes	2.61E-02
129	GO:0010252: auxin homeostasis	2.99E-02
130	GO:0001666: response to hypoxia	3.39E-02
131	GO:0010029: regulation of seed germination	3.52E-02
132	GO:0071555: cell wall organization	3.59E-02
133	GO:0048481: plant ovule development	4.09E-02
134	GO:0018298: protein-chromophore linkage	4.09E-02
135	GO:0010311: lateral root formation	4.24E-02
136	GO:0006499: N-terminal protein myristoylation	4.38E-02
137	GO:0009416: response to light stimulus	4.42E-02
138	GO:0009910: negative regulation of flower development	4.53E-02
139	GO:0007568: aging	4.53E-02
140	GO:0006865: amino acid transport	4.69E-02
141	GO:0006970: response to osmotic stress	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity	0.00E+00
2	GO:0004561: alpha-N-acetylglucosaminidase activity	0.00E+00
3	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
4	GO:0019808: polyamine binding	0.00E+00
5	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
6	GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	0.00E+00
7	GO:0042834: peptidoglycan binding	2.63E-04
8	GO:0005290: L-histidine transmembrane transporter activity	2.63E-04
9	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.63E-04
10	GO:0004830: tryptophan-tRNA ligase activity	2.63E-04
11	GO:0004047: aminomethyltransferase activity	5.78E-04
12	GO:0008805: carbon-monoxide oxygenase activity	5.78E-04
13	GO:0000064: L-ornithine transmembrane transporter activity	5.78E-04
14	GO:0009884: cytokinin receptor activity	5.78E-04
15	GO:0050017: L-3-cyanoalanine synthase activity	5.78E-04
16	GO:0005096: GTPase activator activity	7.30E-04
17	GO:0045548: phenylalanine ammonia-lyase activity	9.39E-04
18	GO:0003913: DNA photolyase activity	9.39E-04
19	GO:0004557: alpha-galactosidase activity	9.39E-04
20	GO:0005034: osmosensor activity	9.39E-04
21	GO:0052692: raffinose alpha-galactosidase activity	9.39E-04
22	GO:0043424: protein histidine kinase binding	1.30E-03
23	GO:0001872: (1->3)-beta-D-glucan binding	1.34E-03
24	GO:0015189: L-lysine transmembrane transporter activity	1.34E-03
25	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	1.34E-03
26	GO:0015181: arginine transmembrane transporter activity	1.34E-03
27	GO:0010011: auxin binding	1.79E-03
28	GO:0010328: auxin influx transmembrane transporter activity	1.79E-03
29	GO:0070628: proteasome binding	1.79E-03
30	GO:0004845: uracil phosphoribosyltransferase activity	1.79E-03
31	GO:0008725: DNA-3-methyladenine glycosylase activity	2.29E-03
32	GO:0005471: ATP:ADP antiporter activity	2.29E-03
33	GO:0019901: protein kinase binding	2.68E-03
34	GO:0004332: fructose-bisphosphate aldolase activity	2.82E-03
35	GO:0031593: polyubiquitin binding	2.82E-03
36	GO:2001070: starch binding	2.82E-03
37	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.87E-03
38	GO:0004124: cysteine synthase activity	3.40E-03
39	GO:0004849: uridine kinase activity	3.40E-03
40	GO:0019900: kinase binding	3.40E-03
41	GO:0009881: photoreceptor activity	4.00E-03
42	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.87E-03
43	GO:0008142: oxysterol binding	5.32E-03
44	GO:0046914: transition metal ion binding	5.32E-03
45	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.49E-03
46	GO:0009672: auxin:proton symporter activity	6.77E-03
47	GO:0004673: protein histidine kinase activity	7.54E-03
48	GO:0043621: protein self-association	9.55E-03
49	GO:0035091: phosphatidylinositol binding	9.55E-03
50	GO:0009982: pseudouridine synthase activity	1.00E-02
51	GO:0010329: auxin efflux transmembrane transporter activity	1.00E-02
52	GO:0000155: phosphorelay sensor kinase activity	1.00E-02
53	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.28E-02
54	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.28E-02
55	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.28E-02
56	GO:0043130: ubiquitin binding	1.38E-02
57	GO:0005345: purine nucleobase transmembrane transporter activity	1.48E-02
58	GO:0004871: signal transducer activity	1.77E-02
59	GO:0030570: pectate lyase activity	1.79E-02
60	GO:0004812: aminoacyl-tRNA ligase activity	2.01E-02
61	GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity	2.24E-02
62	GO:0010181: FMN binding	2.36E-02
63	GO:0005355: glucose transmembrane transporter activity	2.36E-02
64	GO:0050662: coenzyme binding	2.36E-02
65	GO:0004519: endonuclease activity	2.41E-02
66	GO:0008565: protein transporter activity	2.55E-02
67	GO:0004518: nuclease activity	2.73E-02
68	GO:0000156: phosphorelay response regulator activity	2.86E-02
69	GO:0051015: actin filament binding	2.86E-02
70	GO:0003684: damaged DNA binding	2.99E-02
71	GO:0005200: structural constituent of cytoskeleton	3.12E-02
72	GO:0003723: RNA binding	3.65E-02
73	GO:0042802: identical protein binding	3.73E-02
74	GO:0030247: polysaccharide binding	3.80E-02
75	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.38E-02
76	GO:0050897: cobalt ion binding	4.53E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0035452: extrinsic component of plastid membrane	0.00E+00
3	GO:0045254: pyruvate dehydrogenase complex	5.78E-04
4	GO:0032432: actin filament bundle	1.34E-03
5	GO:0005886: plasma membrane	2.31E-03
6	GO:0009507: chloroplast	2.84E-03
7	GO:0009986: cell surface	4.00E-03
8	GO:0005884: actin filament	8.35E-03
9	GO:0016602: CCAAT-binding factor complex	1.00E-02
10	GO:0009574: preprophase band	1.00E-02
11	GO:0005578: proteinaceous extracellular matrix	1.00E-02
12	GO:0009532: plastid stroma	1.58E-02
13	GO:0009706: chloroplast inner membrane	1.70E-02
14	GO:0009505: plant-type cell wall	1.70E-02
15	GO:0005623: cell	2.19E-02
16	GO:0005770: late endosome	2.24E-02
17	GO:0031225: anchored component of membrane	2.45E-02
18	GO:0031965: nuclear membrane	2.48E-02
19	GO:0030529: intracellular ribonucleoprotein complex	3.39E-02
20	GO:0046658: anchored component of plasma membrane	3.89E-02
21	GO:0009707: chloroplast outer membrane	4.09E-02
22	GO:0000151: ubiquitin ligase complex	4.09E-02
23	GO:0009536: plastid	4.81E-02