Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13950

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010081: regulation of inflorescence meristem growth0.00E+00
2GO:0010422: regulation of brassinosteroid biosynthetic process0.00E+00
3GO:0009583: detection of light stimulus0.00E+00
4GO:0045176: apical protein localization0.00E+00
5GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
6GO:0071000: response to magnetism0.00E+00
7GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
8GO:0080127: fruit septum development0.00E+00
9GO:0006664: glycolipid metabolic process0.00E+00
10GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
11GO:0009733: response to auxin5.51E-06
12GO:0009734: auxin-activated signaling pathway3.24E-05
13GO:0046620: regulation of organ growth4.05E-05
14GO:0009926: auxin polar transport1.78E-04
15GO:0010582: floral meristem determinacy1.93E-04
16GO:0040008: regulation of growth3.39E-04
17GO:0010080: regulation of floral meristem growth5.83E-04
18GO:0072387: flavin adenine dinucleotide metabolic process5.83E-04
19GO:0043087: regulation of GTPase activity5.83E-04
20GO:0043609: regulation of carbon utilization5.83E-04
21GO:0015904: tetracycline transport5.83E-04
22GO:0034757: negative regulation of iron ion transport5.83E-04
23GO:0000105: histidine biosynthetic process8.05E-04
24GO:0009416: response to light stimulus9.98E-04
25GO:0000373: Group II intron splicing1.17E-03
26GO:1901529: positive regulation of anion channel activity1.25E-03
27GO:0048255: mRNA stabilization1.25E-03
28GO:1900871: chloroplast mRNA modification1.25E-03
29GO:0010617: circadian regulation of calcium ion oscillation1.25E-03
30GO:0010271: regulation of chlorophyll catabolic process1.25E-03
31GO:0099402: plant organ development1.25E-03
32GO:0001736: establishment of planar polarity1.25E-03
33GO:0080009: mRNA methylation1.25E-03
34GO:0009786: regulation of asymmetric cell division1.25E-03
35GO:0010343: singlet oxygen-mediated programmed cell death1.25E-03
36GO:0009638: phototropism1.38E-03
37GO:1900865: chloroplast RNA modification1.38E-03
38GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.49E-03
39GO:0048829: root cap development1.61E-03
40GO:0033591: response to L-ascorbic acid2.06E-03
41GO:1902448: positive regulation of shade avoidance2.06E-03
42GO:0006000: fructose metabolic process2.06E-03
43GO:0080117: secondary growth2.06E-03
44GO:0010022: meristem determinacy2.06E-03
45GO:1901672: positive regulation of systemic acquired resistance2.06E-03
46GO:0071398: cellular response to fatty acid2.06E-03
47GO:2001295: malonyl-CoA biosynthetic process2.06E-03
48GO:0090506: axillary shoot meristem initiation2.06E-03
49GO:0009785: blue light signaling pathway2.43E-03
50GO:0010540: basipetal auxin transport2.75E-03
51GO:0034059: response to anoxia3.00E-03
52GO:0009800: cinnamic acid biosynthetic process3.00E-03
53GO:1990019: protein storage vacuole organization3.00E-03
54GO:1901332: negative regulation of lateral root development3.00E-03
55GO:0010371: regulation of gibberellin biosynthetic process3.00E-03
56GO:0051513: regulation of monopolar cell growth3.00E-03
57GO:0051639: actin filament network formation3.00E-03
58GO:0000160: phosphorelay signal transduction system3.27E-03
59GO:0051017: actin filament bundle assembly3.82E-03
60GO:0005992: trehalose biosynthetic process3.82E-03
61GO:0008295: spermidine biosynthetic process4.04E-03
62GO:0006021: inositol biosynthetic process4.04E-03
63GO:1902347: response to strigolactone4.04E-03
64GO:0009956: radial pattern formation4.04E-03
65GO:0009755: hormone-mediated signaling pathway4.04E-03
66GO:0051764: actin crosslink formation4.04E-03
67GO:0010438: cellular response to sulfur starvation5.19E-03
68GO:0010158: abaxial cell fate specification5.19E-03
69GO:0080110: sporopollenin biosynthetic process5.19E-03
70GO:0016131: brassinosteroid metabolic process5.19E-03
71GO:0045487: gibberellin catabolic process5.19E-03
72GO:0010117: photoprotection5.19E-03
73GO:0046283: anthocyanin-containing compound metabolic process5.19E-03
74GO:0048497: maintenance of floral organ identity5.19E-03
75GO:0016123: xanthophyll biosynthetic process5.19E-03
76GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.55E-03
77GO:0071215: cellular response to abscisic acid stimulus5.55E-03
78GO:0010358: leaf shaping6.43E-03
79GO:0016554: cytidine to uridine editing6.43E-03
80GO:0009920: cell plate formation involved in plant-type cell wall biogenesis6.43E-03
81GO:0009913: epidermal cell differentiation6.43E-03
82GO:0060918: auxin transport6.43E-03
83GO:1901371: regulation of leaf morphogenesis6.43E-03
84GO:0006559: L-phenylalanine catabolic process6.43E-03
85GO:1902456: regulation of stomatal opening6.43E-03
86GO:0048831: regulation of shoot system development6.43E-03
87GO:0003006: developmental process involved in reproduction6.43E-03
88GO:0048827: phyllome development6.43E-03
89GO:0010087: phloem or xylem histogenesis7.09E-03
90GO:0010118: stomatal movement7.09E-03
91GO:0045892: negative regulation of transcription, DNA-templated7.22E-03
92GO:0010305: leaf vascular tissue pattern formation7.65E-03
93GO:0009741: response to brassinosteroid7.65E-03
94GO:0010244: response to low fluence blue light stimulus by blue low-fluence system7.77E-03
95GO:0031930: mitochondria-nucleus signaling pathway7.77E-03
96GO:0048509: regulation of meristem development7.77E-03
97GO:0010310: regulation of hydrogen peroxide metabolic process7.77E-03
98GO:0009646: response to absence of light8.23E-03
99GO:0009736: cytokinin-activated signaling pathway8.44E-03
100GO:0048825: cotyledon development8.84E-03
101GO:0030497: fatty acid elongation9.20E-03
102GO:0010050: vegetative phase change9.20E-03
103GO:0010098: suspensor development9.20E-03
104GO:0000082: G1/S transition of mitotic cell cycle9.20E-03
105GO:0010444: guard mother cell differentiation9.20E-03
106GO:0051510: regulation of unidimensional cell growth9.20E-03
107GO:0006955: immune response9.20E-03
108GO:0071554: cell wall organization or biogenesis9.47E-03
109GO:0016132: brassinosteroid biosynthetic process9.47E-03
110GO:0010583: response to cyclopentenone1.01E-02
111GO:0009819: drought recovery1.07E-02
112GO:0006402: mRNA catabolic process1.07E-02
113GO:0010439: regulation of glucosinolate biosynthetic process1.07E-02
114GO:0009850: auxin metabolic process1.07E-02
115GO:2000070: regulation of response to water deprivation1.07E-02
116GO:0048316: seed development1.09E-02
117GO:0009828: plant-type cell wall loosening1.15E-02
118GO:0006002: fructose 6-phosphate metabolic process1.23E-02
119GO:0009826: unidimensional cell growth1.23E-02
120GO:0009657: plastid organization1.23E-02
121GO:0032544: plastid translation1.23E-02
122GO:0006098: pentose-phosphate shunt1.40E-02
123GO:0048507: meristem development1.40E-02
124GO:0046916: cellular transition metal ion homeostasis1.40E-02
125GO:0009056: catabolic process1.40E-02
126GO:0010018: far-red light signaling pathway1.58E-02
127GO:1900426: positive regulation of defense response to bacterium1.58E-02
128GO:0009299: mRNA transcription1.76E-02
129GO:0006535: cysteine biosynthetic process from serine1.76E-02
130GO:0009641: shade avoidance1.76E-02
131GO:0006949: syncytium formation1.76E-02
132GO:0031627: telomeric loop formation1.76E-02
133GO:0018298: protein-chromophore linkage1.80E-02
134GO:0010311: lateral root formation1.89E-02
135GO:0009682: induced systemic resistance1.95E-02
136GO:0006415: translational termination1.95E-02
137GO:0048765: root hair cell differentiation1.95E-02
138GO:0006790: sulfur compound metabolic process2.15E-02
139GO:0045037: protein import into chloroplast stroma2.15E-02
140GO:0010105: negative regulation of ethylene-activated signaling pathway2.15E-02
141GO:0006865: amino acid transport2.19E-02
142GO:0009867: jasmonic acid mediated signaling pathway2.29E-02
143GO:0010588: cotyledon vascular tissue pattern formation2.36E-02
144GO:0010102: lateral root morphogenesis2.36E-02
145GO:2000028: regulation of photoperiodism, flowering2.36E-02
146GO:0010229: inflorescence development2.36E-02
147GO:0010075: regulation of meristem growth2.36E-02
148GO:0009725: response to hormone2.36E-02
149GO:0006094: gluconeogenesis2.36E-02
150GO:0048467: gynoecium development2.57E-02
151GO:0010207: photosystem II assembly2.57E-02
152GO:0009933: meristem structural organization2.57E-02
153GO:0010223: secondary shoot formation2.57E-02
154GO:0006839: mitochondrial transport2.61E-02
155GO:0030001: metal ion transport2.61E-02
156GO:0006631: fatty acid metabolic process2.72E-02
157GO:0009825: multidimensional cell growth2.79E-02
158GO:0046854: phosphatidylinositol phosphorylation2.79E-02
159GO:0007165: signal transduction2.88E-02
160GO:0042753: positive regulation of circadian rhythm3.01E-02
161GO:0042546: cell wall biogenesis3.07E-02
162GO:0009644: response to high light intensity3.19E-02
163GO:0007010: cytoskeleton organization3.24E-02
164GO:2000377: regulation of reactive oxygen species metabolic process3.24E-02
165GO:0019344: cysteine biosynthetic process3.24E-02
166GO:0009636: response to toxic substance3.32E-02
167GO:0009664: plant-type cell wall organization3.70E-02
168GO:0016114: terpenoid biosynthetic process3.72E-02
169GO:0003333: amino acid transmembrane transport3.72E-02
170GO:0016998: cell wall macromolecule catabolic process3.72E-02
171GO:0010431: seed maturation3.72E-02
172GO:0016226: iron-sulfur cluster assembly3.97E-02
173GO:0009693: ethylene biosynthetic process4.22E-02
174GO:0009686: gibberellin biosynthetic process4.22E-02
175GO:0010082: regulation of root meristem growth4.22E-02
176GO:0001944: vasculature development4.22E-02
177GO:0009625: response to insect4.22E-02
178GO:0006468: protein phosphorylation4.32E-02
179GO:0009909: regulation of flower development4.39E-02
180GO:0010584: pollen exine formation4.48E-02
181GO:0006284: base-excision repair4.48E-02
182GO:0042127: regulation of cell proliferation4.48E-02
183GO:0009658: chloroplast organization4.55E-02
184GO:0006351: transcription, DNA-templated4.60E-02
185GO:0070417: cellular response to cold4.74E-02
RankGO TermAdjusted P value
1GO:0071633: dihydroceramidase activity0.00E+00
2GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
3GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
4GO:0004401: histidinol-phosphatase activity0.00E+00
5GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
6GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity0.00E+00
7GO:0052834: inositol monophosphate phosphatase activity0.00E+00
8GO:0008805: carbon-monoxide oxygenase activity1.48E-05
9GO:0001872: (1->3)-beta-D-glucan binding1.04E-04
10GO:0042834: peptidoglycan binding5.83E-04
11GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity5.83E-04
12GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity5.83E-04
13GO:0003879: ATP phosphoribosyltransferase activity5.83E-04
14GO:0010347: L-galactose-1-phosphate phosphatase activity5.83E-04
15GO:0010012: steroid 22-alpha hydroxylase activity5.83E-04
16GO:0005227: calcium activated cation channel activity5.83E-04
17GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.25E-03
18GO:0008934: inositol monophosphate 1-phosphatase activity1.25E-03
19GO:0008493: tetracycline transporter activity1.25E-03
20GO:0052833: inositol monophosphate 4-phosphatase activity1.25E-03
21GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.25E-03
22GO:0050736: O-malonyltransferase activity1.25E-03
23GO:0009884: cytokinin receptor activity1.25E-03
24GO:0050017: L-3-cyanoalanine synthase activity1.25E-03
25GO:0017118: lipoyltransferase activity1.25E-03
26GO:0045543: gibberellin 2-beta-dioxygenase activity1.25E-03
27GO:0043425: bHLH transcription factor binding1.25E-03
28GO:0010296: prenylcysteine methylesterase activity1.25E-03
29GO:0004047: aminomethyltransferase activity1.25E-03
30GO:0004766: spermidine synthase activity1.25E-03
31GO:0052832: inositol monophosphate 3-phosphatase activity1.25E-03
32GO:0004805: trehalose-phosphatase activity1.61E-03
33GO:0045548: phenylalanine ammonia-lyase activity2.06E-03
34GO:0003913: DNA photolyase activity2.06E-03
35GO:0005034: osmosensor activity2.06E-03
36GO:0004871: signal transducer activity2.19E-03
37GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity3.00E-03
38GO:0016149: translation release factor activity, codon specific3.00E-03
39GO:0009882: blue light photoreceptor activity3.00E-03
40GO:0010328: auxin influx transmembrane transporter activity4.04E-03
41GO:0019199: transmembrane receptor protein kinase activity4.04E-03
42GO:0046527: glucosyltransferase activity4.04E-03
43GO:0010011: auxin binding4.04E-03
44GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed4.04E-03
45GO:0005471: ATP:ADP antiporter activity5.19E-03
46GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.19E-03
47GO:0003989: acetyl-CoA carboxylase activity5.19E-03
48GO:0008725: DNA-3-methyladenine glycosylase activity5.19E-03
49GO:0003723: RNA binding6.17E-03
50GO:0004332: fructose-bisphosphate aldolase activity6.43E-03
51GO:0004709: MAP kinase kinase kinase activity6.43E-03
52GO:0000293: ferric-chelate reductase activity6.43E-03
53GO:2001070: starch binding6.43E-03
54GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity7.65E-03
55GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity7.77E-03
56GO:0016832: aldehyde-lyase activity7.77E-03
57GO:0019900: kinase binding7.77E-03
58GO:0004124: cysteine synthase activity7.77E-03
59GO:0050662: coenzyme binding8.23E-03
60GO:0009881: photoreceptor activity9.20E-03
61GO:0042802: identical protein binding9.68E-03
62GO:0000156: phosphorelay response regulator activity1.08E-02
63GO:0051015: actin filament binding1.08E-02
64GO:0046914: transition metal ion binding1.23E-02
65GO:0016413: O-acetyltransferase activity1.30E-02
66GO:0071949: FAD binding1.40E-02
67GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.40E-02
68GO:0003747: translation release factor activity1.40E-02
69GO:0016301: kinase activity1.40E-02
70GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.60E-02
71GO:0030247: polysaccharide binding1.62E-02
72GO:0004673: protein histidine kinase activity1.76E-02
73GO:0005096: GTPase activator activity1.89E-02
74GO:0003691: double-stranded telomeric DNA binding1.95E-02
75GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.09E-02
76GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors2.29E-02
77GO:0003725: double-stranded RNA binding2.36E-02
78GO:0000155: phosphorelay sensor kinase activity2.36E-02
79GO:0004674: protein serine/threonine kinase activity2.48E-02
80GO:0042803: protein homodimerization activity2.53E-02
81GO:0008146: sulfotransferase activity2.79E-02
82GO:0003712: transcription cofactor activity2.79E-02
83GO:0008017: microtubule binding2.81E-02
84GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.01E-02
85GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.01E-02
86GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.01E-02
87GO:0004672: protein kinase activity3.14E-02
88GO:0005528: FK506 binding3.24E-02
89GO:0031418: L-ascorbic acid binding3.24E-02
90GO:0043424: protein histidine kinase binding3.48E-02
91GO:0005345: purine nucleobase transmembrane transporter activity3.48E-02
92GO:0033612: receptor serine/threonine kinase binding3.72E-02
93GO:0003964: RNA-directed DNA polymerase activity3.72E-02
94GO:0010333: terpene synthase activity3.72E-02
95GO:0003700: transcription factor activity, sequence-specific DNA binding4.14E-02
96GO:0030570: pectate lyase activity4.22E-02
97GO:0003777: microtubule motor activity4.39E-02
98GO:0015171: amino acid transmembrane transporter activity4.39E-02
99GO:0016788: hydrolase activity, acting on ester bonds4.66E-02
RankGO TermAdjusted P value
1GO:0000408: EKC/KEOPS complex0.00E+00
2GO:0009986: cell surface6.46E-04
3GO:0030139: endocytic vesicle2.06E-03
4GO:0009317: acetyl-CoA carboxylase complex2.06E-03
5GO:0016605: PML body2.06E-03
6GO:0032585: multivesicular body membrane3.00E-03
7GO:0032432: actin filament bundle3.00E-03
8GO:0015629: actin cytoskeleton5.55E-03
9GO:0005886: plasma membrane9.67E-03
10GO:0046658: anchored component of plasma membrane1.03E-02
11GO:0000783: nuclear telomere cap complex1.23E-02
12GO:0016604: nuclear body1.58E-02
13GO:0005884: actin filament1.95E-02
14GO:0009536: plastid2.18E-02
15GO:0009574: preprophase band2.36E-02
16GO:0005578: proteinaceous extracellular matrix2.36E-02
17GO:0030095: chloroplast photosystem II2.57E-02
18GO:0005875: microtubule associated complex3.01E-02
19GO:0005856: cytoskeleton3.32E-02
20GO:0009654: photosystem II oxygen evolving complex3.48E-02
21GO:0005871: kinesin complex4.74E-02
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Gene type



Gene DE type