Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13930

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090279: regulation of calcium ion import0.00E+00
2GO:0071474: cellular hyperosmotic response0.00E+00
3GO:0015995: chlorophyll biosynthetic process6.10E-06
4GO:0015979: photosynthesis2.05E-05
5GO:0000481: maturation of 5S rRNA2.64E-05
6GO:0042371: vitamin K biosynthetic process2.64E-05
7GO:0071461: cellular response to redox state2.64E-05
8GO:0034337: RNA folding2.64E-05
9GO:0010541: acropetal auxin transport6.72E-05
10GO:0051262: protein tetramerization6.72E-05
11GO:0080005: photosystem stoichiometry adjustment6.72E-05
12GO:0010160: formation of animal organ boundary1.18E-04
13GO:0010731: protein glutathionylation1.76E-04
14GO:2001141: regulation of RNA biosynthetic process1.76E-04
15GO:0043481: anthocyanin accumulation in tissues in response to UV light1.76E-04
16GO:0015976: carbon utilization2.39E-04
17GO:0006465: signal peptide processing3.07E-04
18GO:0050665: hydrogen peroxide biosynthetic process3.78E-04
19GO:0060918: auxin transport3.78E-04
20GO:0009854: oxidative photosynthetic carbon pathway4.53E-04
21GO:0010019: chloroplast-nucleus signaling pathway4.53E-04
22GO:0009645: response to low light intensity stimulus5.30E-04
23GO:0032508: DNA duplex unwinding6.10E-04
24GO:0052543: callose deposition in cell wall6.10E-04
25GO:0016559: peroxisome fission6.10E-04
26GO:0010204: defense response signaling pathway, resistance gene-independent6.94E-04
27GO:0017004: cytochrome complex assembly6.94E-04
28GO:0071482: cellular response to light stimulus6.94E-04
29GO:0043069: negative regulation of programmed cell death9.59E-04
30GO:0043085: positive regulation of catalytic activity1.05E-03
31GO:0006352: DNA-templated transcription, initiation1.05E-03
32GO:0019684: photosynthesis, light reaction1.05E-03
33GO:0008361: regulation of cell size1.15E-03
34GO:0009767: photosynthetic electron transport chain1.25E-03
35GO:0006633: fatty acid biosynthetic process1.26E-03
36GO:0010540: basipetal auxin transport1.35E-03
37GO:0010020: chloroplast fission1.35E-03
38GO:0006636: unsaturated fatty acid biosynthetic process1.56E-03
39GO:0009768: photosynthesis, light harvesting in photosystem I1.78E-03
40GO:0030245: cellulose catabolic process2.02E-03
41GO:0048443: stamen development2.26E-03
42GO:0010118: stomatal movement2.52E-03
43GO:0009958: positive gravitropism2.65E-03
44GO:0006869: lipid transport3.40E-03
45GO:0009639: response to red or far red light3.47E-03
46GO:0009627: systemic acquired resistance4.22E-03
47GO:0018298: protein-chromophore linkage4.69E-03
48GO:0010218: response to far red light5.02E-03
49GO:0009631: cold acclimation5.18E-03
50GO:0048527: lateral root development5.18E-03
51GO:0009637: response to blue light5.52E-03
52GO:0006631: fatty acid metabolic process6.21E-03
53GO:0009926: auxin polar transport6.57E-03
54GO:0009640: photomorphogenesis6.57E-03
55GO:0009644: response to high light intensity6.94E-03
56GO:0009636: response to toxic substance7.12E-03
57GO:0007623: circadian rhythm1.52E-02
58GO:0008380: RNA splicing1.73E-02
59GO:0009409: response to cold1.86E-02
60GO:0006970: response to osmotic stress2.19E-02
61GO:0009737: response to abscisic acid2.92E-02
62GO:0032259: methylation3.10E-02
63GO:0016042: lipid catabolic process3.13E-02
64GO:0009751: response to salicylic acid3.16E-02
65GO:0006629: lipid metabolic process3.19E-02
66GO:0006397: mRNA processing3.29E-02
67GO:0048364: root development3.29E-02
68GO:0009753: response to jasmonic acid3.36E-02
69GO:0006357: regulation of transcription from RNA polymerase II promoter3.90E-02
70GO:0009734: auxin-activated signaling pathway4.07E-02
71GO:0009735: response to cytokinin4.51E-02
72GO:0009416: response to light stimulus4.80E-02
RankGO TermAdjusted P value
1GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
2GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
3GO:0004328: formamidase activity2.64E-05
4GO:0046906: tetrapyrrole binding2.64E-05
5GO:0005227: calcium activated cation channel activity2.64E-05
6GO:0080132: fatty acid alpha-hydroxylase activity2.64E-05
7GO:0004312: fatty acid synthase activity6.72E-05
8GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity1.18E-04
9GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.76E-04
10GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.76E-04
11GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.76E-04
12GO:0001872: (1->3)-beta-D-glucan binding1.76E-04
13GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.76E-04
14GO:0016851: magnesium chelatase activity1.76E-04
15GO:0008891: glycolate oxidase activity2.39E-04
16GO:0001053: plastid sigma factor activity2.39E-04
17GO:0004045: aminoacyl-tRNA hydrolase activity2.39E-04
18GO:0016987: sigma factor activity2.39E-04
19GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity4.53E-04
20GO:0005261: cation channel activity4.53E-04
21GO:0019899: enzyme binding5.30E-04
22GO:0047372: acylglycerol lipase activity1.05E-03
23GO:0004089: carbonate dehydratase activity1.25E-03
24GO:0010329: auxin efflux transmembrane transporter activity1.25E-03
25GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.27E-03
26GO:0031409: pigment binding1.56E-03
27GO:0008810: cellulase activity2.14E-03
28GO:0010181: FMN binding2.78E-03
29GO:0016491: oxidoreductase activity3.06E-03
30GO:0016168: chlorophyll binding4.06E-03
31GO:0030247: polysaccharide binding4.37E-03
32GO:0008289: lipid binding5.29E-03
33GO:0016887: ATPase activity5.89E-03
34GO:0004364: glutathione transferase activity6.39E-03
35GO:0003899: DNA-directed 5'-3' RNA polymerase activity8.08E-03
36GO:0003824: catalytic activity1.50E-02
37GO:0008017: microtubule binding1.57E-02
38GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.80E-02
39GO:0042802: identical protein binding1.80E-02
40GO:0016788: hydrolase activity, acting on ester bonds2.10E-02
41GO:0008233: peptidase activity2.39E-02
42GO:0052689: carboxylic ester hydrolase activity2.60E-02
43GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.75E-02
44GO:0042803: protein homodimerization activity2.84E-02
45GO:0016787: hydrolase activity2.94E-02
46GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding2.97E-02
47GO:0003924: GTPase activity3.19E-02
48GO:0009055: electron carrier activity3.36E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast2.54E-08
2GO:0009535: chloroplast thylakoid membrane7.94E-08
3GO:0005787: signal peptidase complex2.64E-05
4GO:0009344: nitrite reductase complex [NAD(P)H]2.64E-05
5GO:0009782: photosystem I antenna complex2.64E-05
6GO:0009654: photosystem II oxygen evolving complex5.56E-05
7GO:0010007: magnesium chelatase complex1.18E-04
8GO:0009570: chloroplast stroma2.75E-04
9GO:0009539: photosystem II reaction center6.94E-04
10GO:0009543: chloroplast thylakoid lumen1.01E-03
11GO:0005777: peroxisome1.07E-03
12GO:0032040: small-subunit processome1.15E-03
13GO:0030095: chloroplast photosystem II1.35E-03
14GO:0030076: light-harvesting complex1.45E-03
15GO:0046658: anchored component of plasma membrane1.81E-03
16GO:0031969: chloroplast membrane2.60E-03
17GO:0009522: photosystem I2.78E-03
18GO:0019898: extrinsic component of membrane2.91E-03
19GO:0030529: intracellular ribonucleoprotein complex3.91E-03
20GO:0009707: chloroplast outer membrane4.69E-03
21GO:0031977: thylakoid lumen6.21E-03
22GO:0009579: thylakoid8.06E-03
23GO:0009534: chloroplast thylakoid8.14E-03
24GO:0031225: anchored component of membrane1.05E-02
25GO:0010287: plastoglobule1.17E-02
26GO:0009941: chloroplast envelope1.54E-02
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Gene type



Gene DE type