Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G13490

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900367: positive regulation of defense response to insect0.00E+00
2GO:0002764: immune response-regulating signaling pathway0.00E+00
3GO:0033587: shikimate biosynthetic process0.00E+00
4GO:0032491: detection of molecule of fungal origin0.00E+00
5GO:0046865: terpenoid transport0.00E+00
6GO:0010324: membrane invagination0.00E+00
7GO:0032499: detection of peptidoglycan0.00E+00
8GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
9GO:0071327: cellular response to trehalose stimulus0.00E+00
10GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
11GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
12GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
13GO:0009312: oligosaccharide biosynthetic process0.00E+00
14GO:0006468: protein phosphorylation6.23E-07
15GO:0031349: positive regulation of defense response8.79E-06
16GO:0009751: response to salicylic acid1.05E-05
17GO:0009737: response to abscisic acid1.79E-05
18GO:0031348: negative regulation of defense response2.51E-05
19GO:0071456: cellular response to hypoxia2.51E-05
20GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway5.39E-05
21GO:0033358: UDP-L-arabinose biosynthetic process1.14E-04
22GO:0060548: negative regulation of cell death1.14E-04
23GO:0045227: capsule polysaccharide biosynthetic process1.14E-04
24GO:0010200: response to chitin1.43E-04
25GO:0010150: leaf senescence1.51E-04
26GO:0042742: defense response to bacterium2.05E-04
27GO:0009643: photosynthetic acclimation2.51E-04
28GO:0009867: jasmonic acid mediated signaling pathway3.86E-04
29GO:1900056: negative regulation of leaf senescence4.34E-04
30GO:1901183: positive regulation of camalexin biosynthetic process4.45E-04
31GO:0009968: negative regulation of signal transduction4.45E-04
32GO:0048508: embryonic meristem development4.45E-04
33GO:0010729: positive regulation of hydrogen peroxide biosynthetic process4.45E-04
34GO:0051938: L-glutamate import4.45E-04
35GO:0015760: glucose-6-phosphate transport4.45E-04
36GO:0046256: 2,4,6-trinitrotoluene catabolic process4.45E-04
37GO:0043547: positive regulation of GTPase activity4.45E-04
38GO:0019567: arabinose biosynthetic process4.45E-04
39GO:0015969: guanosine tetraphosphate metabolic process4.45E-04
40GO:0009787: regulation of abscisic acid-activated signaling pathway5.41E-04
41GO:0045010: actin nucleation5.41E-04
42GO:0051707: response to other organism5.76E-04
43GO:0010204: defense response signaling pathway, resistance gene-independent6.60E-04
44GO:2000031: regulation of salicylic acid mediated signaling pathway6.60E-04
45GO:0006855: drug transmembrane transport7.30E-04
46GO:0009749: response to glucose7.51E-04
47GO:0010112: regulation of systemic acquired resistance7.90E-04
48GO:1900426: positive regulation of defense response to bacterium9.32E-04
49GO:0010115: regulation of abscisic acid biosynthetic process9.61E-04
50GO:0002240: response to molecule of oomycetes origin9.61E-04
51GO:0010271: regulation of chlorophyll catabolic process9.61E-04
52GO:0044419: interspecies interaction between organisms9.61E-04
53GO:0019725: cellular homeostasis9.61E-04
54GO:0009945: radial axis specification9.61E-04
55GO:0015712: hexose phosphate transport9.61E-04
56GO:0051258: protein polymerization9.61E-04
57GO:0009446: putrescine biosynthetic process9.61E-04
58GO:0043091: L-arginine import9.61E-04
59GO:0046939: nucleotide phosphorylation9.61E-04
60GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.61E-04
61GO:0015802: basic amino acid transport9.61E-04
62GO:0010618: aerenchyma formation9.61E-04
63GO:0006527: arginine catabolic process9.61E-04
64GO:0080181: lateral root branching9.61E-04
65GO:0009727: detection of ethylene stimulus9.61E-04
66GO:0009611: response to wounding1.31E-03
67GO:0009753: response to jasmonic acid1.53E-03
68GO:0006954: inflammatory response1.57E-03
69GO:0034051: negative regulation of plant-type hypersensitive response1.57E-03
70GO:0010498: proteasomal protein catabolic process1.57E-03
71GO:0016045: detection of bacterium1.57E-03
72GO:1900140: regulation of seedling development1.57E-03
73GO:0010359: regulation of anion channel activity1.57E-03
74GO:0035436: triose phosphate transmembrane transport1.57E-03
75GO:0045836: positive regulation of meiotic nuclear division1.57E-03
76GO:0015783: GDP-fucose transport1.57E-03
77GO:0015692: lead ion transport1.57E-03
78GO:0015714: phosphoenolpyruvate transport1.57E-03
79GO:0015695: organic cation transport1.57E-03
80GO:0080168: abscisic acid transport1.57E-03
81GO:1900055: regulation of leaf senescence1.57E-03
82GO:0009414: response to water deprivation1.89E-03
83GO:0010167: response to nitrate2.05E-03
84GO:0009225: nucleotide-sugar metabolic process2.05E-03
85GO:0006499: N-terminal protein myristoylation2.06E-03
86GO:0006952: defense response2.20E-03
87GO:0010731: protein glutathionylation2.27E-03
88GO:0015696: ammonium transport2.27E-03
89GO:0072583: clathrin-dependent endocytosis2.27E-03
90GO:0071323: cellular response to chitin2.27E-03
91GO:0046836: glycolipid transport2.27E-03
92GO:0048194: Golgi vesicle budding2.27E-03
93GO:0009863: salicylic acid mediated signaling pathway2.54E-03
94GO:2000377: regulation of reactive oxygen species metabolic process2.54E-03
95GO:0046777: protein autophosphorylation2.79E-03
96GO:0071219: cellular response to molecule of bacterial origin3.05E-03
97GO:0015713: phosphoglycerate transport3.05E-03
98GO:0008295: spermidine biosynthetic process3.05E-03
99GO:0080142: regulation of salicylic acid biosynthetic process3.05E-03
100GO:0009694: jasmonic acid metabolic process3.05E-03
101GO:0080037: negative regulation of cytokinin-activated signaling pathway3.05E-03
102GO:0010109: regulation of photosynthesis3.05E-03
103GO:0072488: ammonium transmembrane transport3.05E-03
104GO:0006012: galactose metabolic process3.68E-03
105GO:0045927: positive regulation of growth3.90E-03
106GO:0034052: positive regulation of plant-type hypersensitive response3.90E-03
107GO:2000762: regulation of phenylpropanoid metabolic process3.90E-03
108GO:0030041: actin filament polymerization3.90E-03
109GO:0018344: protein geranylgeranylation3.90E-03
110GO:0010225: response to UV-C3.90E-03
111GO:0009697: salicylic acid biosynthetic process3.90E-03
112GO:0009247: glycolipid biosynthetic process3.90E-03
113GO:0009409: response to cold4.13E-03
114GO:0006470: protein dephosphorylation4.39E-03
115GO:0007166: cell surface receptor signaling pathway4.39E-03
116GO:0033365: protein localization to organelle4.83E-03
117GO:0010337: regulation of salicylic acid metabolic process4.83E-03
118GO:0006596: polyamine biosynthetic process4.83E-03
119GO:0018258: protein O-linked glycosylation via hydroxyproline4.83E-03
120GO:0002238: response to molecule of fungal origin4.83E-03
121GO:0009759: indole glucosinolate biosynthetic process4.83E-03
122GO:0010942: positive regulation of cell death4.83E-03
123GO:0010405: arabinogalactan protein metabolic process4.83E-03
124GO:0048317: seed morphogenesis4.83E-03
125GO:0045926: negative regulation of growth5.83E-03
126GO:0009942: longitudinal axis specification5.83E-03
127GO:0009423: chorismate biosynthetic process5.83E-03
128GO:0031930: mitochondria-nucleus signaling pathway5.83E-03
129GO:0010310: regulation of hydrogen peroxide metabolic process5.83E-03
130GO:0071470: cellular response to osmotic stress5.83E-03
131GO:0006979: response to oxidative stress5.95E-03
132GO:0010193: response to ozone6.25E-03
133GO:0007264: small GTPase mediated signal transduction6.68E-03
134GO:0009626: plant-type hypersensitive response6.70E-03
135GO:1900057: positive regulation of leaf senescence6.89E-03
136GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway6.89E-03
137GO:0071446: cellular response to salicylic acid stimulus6.89E-03
138GO:0009620: response to fungus6.98E-03
139GO:0009624: response to nematode7.83E-03
140GO:0010928: regulation of auxin mediated signaling pathway8.02E-03
141GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.02E-03
142GO:0009819: drought recovery8.02E-03
143GO:0019375: galactolipid biosynthetic process8.02E-03
144GO:0030162: regulation of proteolysis8.02E-03
145GO:0009061: anaerobic respiration8.02E-03
146GO:0006904: vesicle docking involved in exocytosis8.07E-03
147GO:0010120: camalexin biosynthetic process9.21E-03
148GO:0009932: cell tip growth9.21E-03
149GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.60E-03
150GO:0006098: pentose-phosphate shunt1.05E-02
151GO:0046916: cellular transition metal ion homeostasis1.05E-02
152GO:0015780: nucleotide-sugar transport1.05E-02
153GO:0006950: response to stress1.07E-02
154GO:0048268: clathrin coat assembly1.18E-02
155GO:0048354: mucilage biosynthetic process involved in seed coat development1.18E-02
156GO:0010380: regulation of chlorophyll biosynthetic process1.18E-02
157GO:0006032: chitin catabolic process1.31E-02
158GO:0051555: flavonol biosynthetic process1.31E-02
159GO:0009407: toxin catabolic process1.31E-02
160GO:0010119: regulation of stomatal movement1.38E-02
161GO:0009089: lysine biosynthetic process via diaminopimelate1.46E-02
162GO:0072593: reactive oxygen species metabolic process1.46E-02
163GO:0009073: aromatic amino acid family biosynthetic process1.46E-02
164GO:0009682: induced systemic resistance1.46E-02
165GO:0015770: sucrose transport1.46E-02
166GO:0009684: indoleacetic acid biosynthetic process1.46E-02
167GO:0019684: photosynthesis, light reaction1.46E-02
168GO:0009651: response to salt stress1.47E-02
169GO:0045087: innate immune response1.51E-02
170GO:0015706: nitrate transport1.60E-02
171GO:0002213: defense response to insect1.60E-02
172GO:0010105: negative regulation of ethylene-activated signaling pathway1.60E-02
173GO:0000266: mitochondrial fission1.60E-02
174GO:2000028: regulation of photoperiodism, flowering1.75E-02
175GO:0055046: microgametogenesis1.75E-02
176GO:0006829: zinc II ion transport1.75E-02
177GO:0006887: exocytosis1.80E-02
178GO:0006897: endocytosis1.80E-02
179GO:0007034: vacuolar transport1.91E-02
180GO:0002237: response to molecule of bacterial origin1.91E-02
181GO:0009266: response to temperature stimulus1.91E-02
182GO:0034605: cellular response to heat1.91E-02
183GO:0055085: transmembrane transport2.01E-02
184GO:0046688: response to copper ion2.07E-02
185GO:0005985: sucrose metabolic process2.07E-02
186GO:0046854: phosphatidylinositol phosphorylation2.07E-02
187GO:0009636: response to toxic substance2.19E-02
188GO:0000162: tryptophan biosynthetic process2.24E-02
189GO:0031347: regulation of defense response2.36E-02
190GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.36E-02
191GO:0080147: root hair cell development2.41E-02
192GO:0045333: cellular respiration2.41E-02
193GO:0006812: cation transport2.45E-02
194GO:0050832: defense response to fungus2.52E-02
195GO:0006874: cellular calcium ion homeostasis2.59E-02
196GO:0009695: jasmonic acid biosynthetic process2.59E-02
197GO:0006825: copper ion transport2.59E-02
198GO:0006486: protein glycosylation2.63E-02
199GO:0007165: signal transduction2.75E-02
200GO:0051321: meiotic cell cycle2.77E-02
201GO:0003333: amino acid transmembrane transport2.77E-02
202GO:0016998: cell wall macromolecule catabolic process2.77E-02
203GO:0009269: response to desiccation2.77E-02
204GO:2000022: regulation of jasmonic acid mediated signaling pathway2.95E-02
205GO:0010017: red or far-red light signaling pathway2.95E-02
206GO:0016226: iron-sulfur cluster assembly2.95E-02
207GO:0071369: cellular response to ethylene stimulus3.14E-02
208GO:0009625: response to insect3.14E-02
209GO:0042127: regulation of cell proliferation3.33E-02
210GO:0009561: megagametogenesis3.33E-02
211GO:0009306: protein secretion3.33E-02
212GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.53E-02
213GO:0080167: response to karrikin3.57E-02
214GO:0000271: polysaccharide biosynthetic process3.73E-02
215GO:0042391: regulation of membrane potential3.73E-02
216GO:0009960: endosperm development3.94E-02
217GO:0045489: pectin biosynthetic process3.94E-02
218GO:0010182: sugar mediated signaling pathway3.94E-02
219GO:0006885: regulation of pH3.94E-02
220GO:0048544: recognition of pollen4.14E-02
221GO:0035556: intracellular signal transduction4.38E-02
222GO:0002229: defense response to oomycetes4.57E-02
223GO:0019761: glucosinolate biosynthetic process4.79E-02
224GO:0045893: positive regulation of transcription, DNA-templated4.93E-02
RankGO TermAdjusted P value
1GO:0005522: profilin binding0.00E+00
2GO:0004107: chorismate synthase activity0.00E+00
3GO:2001080: chitosan binding0.00E+00
4GO:0005212: structural constituent of eye lens0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
7GO:0080131: hydroxyjasmonate sulfotransferase activity0.00E+00
8GO:0016301: kinase activity5.48E-07
9GO:0004674: protein serine/threonine kinase activity7.05E-06
10GO:0005524: ATP binding1.07E-05
11GO:0019199: transmembrane receptor protein kinase activity1.14E-04
12GO:0050373: UDP-arabinose 4-epimerase activity1.14E-04
13GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.31E-04
14GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.76E-04
15GO:0004012: phospholipid-translocating ATPase activity3.37E-04
16GO:0003978: UDP-glucose 4-epimerase activity3.37E-04
17GO:0019707: protein-cysteine S-acyltransferase activity4.45E-04
18GO:0008792: arginine decarboxylase activity4.45E-04
19GO:0046481: digalactosyldiacylglycerol synthase activity4.45E-04
20GO:0010285: L,L-diaminopimelate aminotransferase activity4.45E-04
21GO:0032050: clathrin heavy chain binding4.45E-04
22GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.45E-04
23GO:0004662: CAAX-protein geranylgeranyltransferase activity4.45E-04
24GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.95E-04
25GO:0015297: antiporter activity7.25E-04
26GO:0019901: protein kinase binding7.51E-04
27GO:0015036: disulfide oxidoreductase activity9.61E-04
28GO:0008728: GTP diphosphokinase activity9.61E-04
29GO:0048531: beta-1,3-galactosyltransferase activity9.61E-04
30GO:0047364: desulfoglucosinolate sulfotransferase activity9.61E-04
31GO:0015152: glucose-6-phosphate transmembrane transporter activity9.61E-04
32GO:0004568: chitinase activity1.08E-03
33GO:0008559: xenobiotic-transporting ATPase activity1.25E-03
34GO:0008375: acetylglucosaminyltransferase activity1.49E-03
35GO:0046423: allene-oxide cyclase activity1.57E-03
36GO:0071917: triose-phosphate transmembrane transporter activity1.57E-03
37GO:0005457: GDP-fucose transmembrane transporter activity1.57E-03
38GO:0016531: copper chaperone activity1.57E-03
39GO:0005509: calcium ion binding1.65E-03
40GO:0015238: drug transmembrane transporter activity1.94E-03
41GO:0008146: sulfotransferase activity2.05E-03
42GO:0035250: UDP-galactosyltransferase activity2.27E-03
43GO:0015181: arginine transmembrane transporter activity2.27E-03
44GO:0015189: L-lysine transmembrane transporter activity2.27E-03
45GO:0017089: glycolipid transporter activity2.27E-03
46GO:0019201: nucleotide kinase activity2.27E-03
47GO:0005515: protein binding2.44E-03
48GO:0005313: L-glutamate transmembrane transporter activity3.05E-03
49GO:0009916: alternative oxidase activity3.05E-03
50GO:0004930: G-protein coupled receptor activity3.05E-03
51GO:0015120: phosphoglycerate transmembrane transporter activity3.05E-03
52GO:0004834: tryptophan synthase activity3.05E-03
53GO:0051861: glycolipid binding3.05E-03
54GO:0033612: receptor serine/threonine kinase binding3.08E-03
55GO:0008519: ammonium transmembrane transporter activity4.83E-03
56GO:1990714: hydroxyproline O-galactosyltransferase activity4.83E-03
57GO:0042626: ATPase activity, coupled to transmembrane movement of substances5.16E-03
58GO:0031625: ubiquitin protein ligase binding5.68E-03
59GO:0004017: adenylate kinase activity5.83E-03
60GO:0003950: NAD+ ADP-ribosyltransferase activity5.83E-03
61GO:0004656: procollagen-proline 4-dioxygenase activity5.83E-03
62GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.83E-03
63GO:0043295: glutathione binding6.89E-03
64GO:0008506: sucrose:proton symporter activity6.89E-03
65GO:0005215: transporter activity7.27E-03
66GO:0043531: ADP binding8.02E-03
67GO:0004714: transmembrane receptor protein tyrosine kinase activity8.02E-03
68GO:0047893: flavonol 3-O-glucosyltransferase activity8.02E-03
69GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.07E-03
70GO:0004430: 1-phosphatidylinositol 4-kinase activity9.21E-03
71GO:0008271: secondary active sulfate transmembrane transporter activity9.21E-03
72GO:0016758: transferase activity, transferring hexosyl groups1.01E-02
73GO:0004842: ubiquitin-protein transferase activity1.17E-02
74GO:0015174: basic amino acid transmembrane transporter activity1.18E-02
75GO:0015112: nitrate transmembrane transporter activity1.18E-02
76GO:0004713: protein tyrosine kinase activity1.31E-02
77GO:0005545: 1-phosphatidylinositol binding1.31E-02
78GO:0004672: protein kinase activity1.33E-02
79GO:0008515: sucrose transmembrane transporter activity1.46E-02
80GO:0005543: phospholipid binding1.46E-02
81GO:0004722: protein serine/threonine phosphatase activity1.46E-02
82GO:0015116: sulfate transmembrane transporter activity1.60E-02
83GO:0008378: galactosyltransferase activity1.60E-02
84GO:0005315: inorganic phosphate transmembrane transporter activity1.75E-02
85GO:0004364: glutathione transferase activity1.87E-02
86GO:0008061: chitin binding2.07E-02
87GO:0004970: ionotropic glutamate receptor activity2.07E-02
88GO:0005217: intracellular ligand-gated ion channel activity2.07E-02
89GO:0004190: aspartic-type endopeptidase activity2.07E-02
90GO:0030552: cAMP binding2.07E-02
91GO:0030553: cGMP binding2.07E-02
92GO:0015293: symporter activity2.19E-02
93GO:0001046: core promoter sequence-specific DNA binding2.41E-02
94GO:0031418: L-ascorbic acid binding2.41E-02
95GO:0003954: NADH dehydrogenase activity2.41E-02
96GO:0008324: cation transmembrane transporter activity2.59E-02
97GO:0043424: protein histidine kinase binding2.59E-02
98GO:0005216: ion channel activity2.59E-02
99GO:0000287: magnesium ion binding2.67E-02
100GO:0036459: thiol-dependent ubiquitinyl hydrolase activity2.77E-02
101GO:0019706: protein-cysteine S-palmitoyltransferase activity2.77E-02
102GO:0035251: UDP-glucosyltransferase activity2.77E-02
103GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.95E-02
104GO:0005525: GTP binding3.11E-02
105GO:0003779: actin binding3.63E-02
106GO:0030551: cyclic nucleotide binding3.73E-02
107GO:0005451: monovalent cation:proton antiporter activity3.73E-02
108GO:0005249: voltage-gated potassium channel activity3.73E-02
109GO:0003713: transcription coactivator activity3.94E-02
110GO:0046873: metal ion transmembrane transporter activity3.94E-02
111GO:0030276: clathrin binding3.94E-02
112GO:0043565: sequence-specific DNA binding3.98E-02
113GO:0015299: solute:proton antiporter activity4.14E-02
114GO:0010181: FMN binding4.14E-02
115GO:0004843: thiol-dependent ubiquitin-specific protease activity4.57E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane9.08E-12
2GO:0016021: integral component of membrane4.10E-08
3GO:0005901: caveola8.79E-06
4GO:0005911: cell-cell junction4.45E-04
5GO:0005953: CAAX-protein geranylgeranyltransferase complex4.45E-04
6GO:0000138: Golgi trans cisterna4.45E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane9.61E-04
8GO:0031314: extrinsic component of mitochondrial inner membrane9.61E-04
9GO:0008287: protein serine/threonine phosphatase complex1.57E-03
10GO:0030139: endocytic vesicle1.57E-03
11GO:0070062: extracellular exosome2.27E-03
12GO:0005758: mitochondrial intermembrane space2.54E-03
13GO:0005794: Golgi apparatus3.57E-03
14GO:0000813: ESCRT I complex3.90E-03
15GO:0016363: nuclear matrix5.83E-03
16GO:0032580: Golgi cisterna membrane7.59E-03
17GO:0030125: clathrin vesicle coat1.31E-02
18GO:0000325: plant-type vacuole1.38E-02
19GO:0005578: proteinaceous extracellular matrix1.75E-02
20GO:0031012: extracellular matrix1.75E-02
21GO:0031902: late endosome membrane1.80E-02
22GO:0005795: Golgi stack2.07E-02
23GO:0005769: early endosome2.24E-02
24GO:0070469: respiratory chain2.59E-02
25GO:0005887: integral component of plasma membrane2.74E-02
26GO:0005741: mitochondrial outer membrane2.77E-02
27GO:0005905: clathrin-coated pit2.77E-02
28GO:0000139: Golgi membrane2.91E-02
29GO:0005802: trans-Golgi network2.98E-02
30GO:0005774: vacuolar membrane3.52E-02
31GO:0030136: clathrin-coated vesicle3.53E-02
32GO:0005768: endosome3.68E-02
33GO:0005770: late endosome3.94E-02
34GO:0016592: mediator complex4.79E-02
35GO:0000145: exocyst4.79E-02
36GO:0005777: peroxisome4.93E-02
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Gene type



Gene DE type