GO Enrichment Analysis of Co-expressed Genes with
AT5G12150
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098586: cellular response to virus | 0.00E+00 |
| 2 | GO:0010203: response to very low fluence red light stimulus | 0.00E+00 |
| 3 | GO:0017009: protein-phycocyanobilin linkage | 0.00E+00 |
| 4 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 5 | GO:0033528: S-methylmethionine cycle | 0.00E+00 |
| 6 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 7 | GO:0043255: regulation of carbohydrate biosynthetic process | 8.43E-07 |
| 8 | GO:0045010: actin nucleation | 8.48E-05 |
| 9 | GO:0071482: cellular response to light stimulus | 1.07E-04 |
| 10 | GO:0015969: guanosine tetraphosphate metabolic process | 1.30E-04 |
| 11 | GO:0000012: single strand break repair | 1.30E-04 |
| 12 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.30E-04 |
| 13 | GO:0015798: myo-inositol transport | 1.30E-04 |
| 14 | GO:0010201: response to continuous far red light stimulus by the high-irradiance response system | 1.30E-04 |
| 15 | GO:1902458: positive regulation of stomatal opening | 1.30E-04 |
| 16 | GO:0009821: alkaloid biosynthetic process | 1.31E-04 |
| 17 | GO:0009793: embryo development ending in seed dormancy | 1.78E-04 |
| 18 | GO:0006352: DNA-templated transcription, initiation | 2.19E-04 |
| 19 | GO:0046741: transport of virus in host, tissue to tissue | 2.99E-04 |
| 20 | GO:0006435: threonyl-tRNA aminoacylation | 2.99E-04 |
| 21 | GO:0000256: allantoin catabolic process | 2.99E-04 |
| 22 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.99E-04 |
| 23 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 2.99E-04 |
| 24 | GO:0010207: photosystem II assembly | 3.27E-04 |
| 25 | GO:0090351: seedling development | 3.67E-04 |
| 26 | GO:0031022: nuclear migration along microfilament | 4.92E-04 |
| 27 | GO:0010136: ureide catabolic process | 4.92E-04 |
| 28 | GO:0017006: protein-tetrapyrrole linkage | 4.92E-04 |
| 29 | GO:0000913: preprophase band assembly | 4.92E-04 |
| 30 | GO:0009584: detection of visible light | 7.04E-04 |
| 31 | GO:0006145: purine nucleobase catabolic process | 7.04E-04 |
| 32 | GO:0043572: plastid fission | 7.04E-04 |
| 33 | GO:2001141: regulation of RNA biosynthetic process | 7.04E-04 |
| 34 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.04E-04 |
| 35 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 7.67E-04 |
| 36 | GO:0006183: GTP biosynthetic process | 9.34E-04 |
| 37 | GO:0006552: leucine catabolic process | 9.34E-04 |
| 38 | GO:0071483: cellular response to blue light | 9.34E-04 |
| 39 | GO:0051322: anaphase | 9.34E-04 |
| 40 | GO:0006661: phosphatidylinositol biosynthetic process | 9.34E-04 |
| 41 | GO:0007018: microtubule-based movement | 9.50E-04 |
| 42 | GO:0007059: chromosome segregation | 9.50E-04 |
| 43 | GO:0016032: viral process | 1.15E-03 |
| 44 | GO:0010158: abaxial cell fate specification | 1.18E-03 |
| 45 | GO:0009904: chloroplast accumulation movement | 1.18E-03 |
| 46 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.18E-03 |
| 47 | GO:1902183: regulation of shoot apical meristem development | 1.18E-03 |
| 48 | GO:0010090: trichome morphogenesis | 1.23E-03 |
| 49 | GO:0010190: cytochrome b6f complex assembly | 1.45E-03 |
| 50 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.45E-03 |
| 51 | GO:0010337: regulation of salicylic acid metabolic process | 1.45E-03 |
| 52 | GO:0000910: cytokinesis | 1.46E-03 |
| 53 | GO:0016126: sterol biosynthetic process | 1.55E-03 |
| 54 | GO:0009612: response to mechanical stimulus | 1.73E-03 |
| 55 | GO:0017148: negative regulation of translation | 1.73E-03 |
| 56 | GO:0009903: chloroplast avoidance movement | 1.73E-03 |
| 57 | GO:0071555: cell wall organization | 1.98E-03 |
| 58 | GO:0030244: cellulose biosynthetic process | 2.01E-03 |
| 59 | GO:0009645: response to low light intensity stimulus | 2.04E-03 |
| 60 | GO:0022904: respiratory electron transport chain | 2.04E-03 |
| 61 | GO:0010161: red light signaling pathway | 2.04E-03 |
| 62 | GO:0009395: phospholipid catabolic process | 2.04E-03 |
| 63 | GO:2000070: regulation of response to water deprivation | 2.36E-03 |
| 64 | GO:0010492: maintenance of shoot apical meristem identity | 2.36E-03 |
| 65 | GO:0048564: photosystem I assembly | 2.36E-03 |
| 66 | GO:0009932: cell tip growth | 2.69E-03 |
| 67 | GO:0022900: electron transport chain | 2.69E-03 |
| 68 | GO:0009658: chloroplast organization | 2.82E-03 |
| 69 | GO:0048507: meristem development | 3.04E-03 |
| 70 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.04E-03 |
| 71 | GO:0010206: photosystem II repair | 3.04E-03 |
| 72 | GO:2000024: regulation of leaf development | 3.04E-03 |
| 73 | GO:0000373: Group II intron splicing | 3.04E-03 |
| 74 | GO:0046685: response to arsenic-containing substance | 3.04E-03 |
| 75 | GO:0042546: cell wall biogenesis | 3.39E-03 |
| 76 | GO:0009086: methionine biosynthetic process | 3.41E-03 |
| 77 | GO:0009638: phototropism | 3.41E-03 |
| 78 | GO:0006032: chitin catabolic process | 3.79E-03 |
| 79 | GO:0006259: DNA metabolic process | 3.79E-03 |
| 80 | GO:0006265: DNA topological change | 4.18E-03 |
| 81 | GO:0006508: proteolysis | 4.37E-03 |
| 82 | GO:0009809: lignin biosynthetic process | 4.38E-03 |
| 83 | GO:0009585: red, far-red light phototransduction | 4.38E-03 |
| 84 | GO:0045037: protein import into chloroplast stroma | 4.58E-03 |
| 85 | GO:0030036: actin cytoskeleton organization | 5.00E-03 |
| 86 | GO:0009767: photosynthetic electron transport chain | 5.00E-03 |
| 87 | GO:0010020: chloroplast fission | 5.44E-03 |
| 88 | GO:0006302: double-strand break repair | 5.44E-03 |
| 89 | GO:0009825: multidimensional cell growth | 5.88E-03 |
| 90 | GO:0010167: response to nitrate | 5.88E-03 |
| 91 | GO:0010053: root epidermal cell differentiation | 5.88E-03 |
| 92 | GO:0009833: plant-type primary cell wall biogenesis | 6.34E-03 |
| 93 | GO:0006833: water transport | 6.34E-03 |
| 94 | GO:0009944: polarity specification of adaxial/abaxial axis | 6.81E-03 |
| 95 | GO:0006825: copper ion transport | 7.30E-03 |
| 96 | GO:0051302: regulation of cell division | 7.30E-03 |
| 97 | GO:0016998: cell wall macromolecule catabolic process | 7.79E-03 |
| 98 | GO:0015992: proton transport | 7.79E-03 |
| 99 | GO:0009058: biosynthetic process | 8.21E-03 |
| 100 | GO:0009814: defense response, incompatible interaction | 8.30E-03 |
| 101 | GO:0006730: one-carbon metabolic process | 8.30E-03 |
| 102 | GO:0031348: negative regulation of defense response | 8.30E-03 |
| 103 | GO:0019722: calcium-mediated signaling | 9.35E-03 |
| 104 | GO:0009306: protein secretion | 9.35E-03 |
| 105 | GO:0006413: translational initiation | 1.00E-02 |
| 106 | GO:0034220: ion transmembrane transport | 1.04E-02 |
| 107 | GO:0045489: pectin biosynthetic process | 1.10E-02 |
| 108 | GO:0010154: fruit development | 1.10E-02 |
| 109 | GO:0010197: polar nucleus fusion | 1.10E-02 |
| 110 | GO:0048868: pollen tube development | 1.10E-02 |
| 111 | GO:0046323: glucose import | 1.10E-02 |
| 112 | GO:0010268: brassinosteroid homeostasis | 1.10E-02 |
| 113 | GO:0009646: response to absence of light | 1.16E-02 |
| 114 | GO:0008654: phospholipid biosynthetic process | 1.22E-02 |
| 115 | GO:0000302: response to reactive oxygen species | 1.28E-02 |
| 116 | GO:0016132: brassinosteroid biosynthetic process | 1.28E-02 |
| 117 | GO:0009630: gravitropism | 1.34E-02 |
| 118 | GO:0016125: sterol metabolic process | 1.46E-02 |
| 119 | GO:0007267: cell-cell signaling | 1.53E-02 |
| 120 | GO:0010411: xyloglucan metabolic process | 1.86E-02 |
| 121 | GO:0016311: dephosphorylation | 1.93E-02 |
| 122 | GO:0018298: protein-chromophore linkage | 2.00E-02 |
| 123 | GO:0009834: plant-type secondary cell wall biogenesis | 2.15E-02 |
| 124 | GO:0010218: response to far red light | 2.15E-02 |
| 125 | GO:0046777: protein autophosphorylation | 2.22E-02 |
| 126 | GO:0045087: innate immune response | 2.37E-02 |
| 127 | GO:0009637: response to blue light | 2.37E-02 |
| 128 | GO:0009853: photorespiration | 2.37E-02 |
| 129 | GO:0009737: response to abscisic acid | 2.49E-02 |
| 130 | GO:0009640: photomorphogenesis | 2.84E-02 |
| 131 | GO:0010114: response to red light | 2.84E-02 |
| 132 | GO:0006629: lipid metabolic process | 3.06E-02 |
| 133 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.60E-02 |
| 134 | GO:0009873: ethylene-activated signaling pathway | 3.94E-02 |
| 135 | GO:0006096: glycolytic process | 3.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071522: ureidoglycine aminohydrolase activity | 0.00E+00 |
| 2 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
| 3 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 4 | GO:0048039: ubiquinone binding | 0.00E+00 |
| 5 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 6 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
| 7 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 8 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 9 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 10 | GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity | 0.00E+00 |
| 11 | GO:0016987: sigma factor activity | 1.40E-05 |
| 12 | GO:0001053: plastid sigma factor activity | 1.40E-05 |
| 13 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 1.30E-04 |
| 14 | GO:0004008: copper-exporting ATPase activity | 1.30E-04 |
| 15 | GO:0031516: far-red light photoreceptor activity | 1.30E-04 |
| 16 | GO:0016844: strictosidine synthase activity | 1.58E-04 |
| 17 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.99E-04 |
| 18 | GO:0004829: threonine-tRNA ligase activity | 2.99E-04 |
| 19 | GO:0004802: transketolase activity | 2.99E-04 |
| 20 | GO:0008728: GTP diphosphokinase activity | 2.99E-04 |
| 21 | GO:0005366: myo-inositol:proton symporter activity | 2.99E-04 |
| 22 | GO:0009883: red or far-red light photoreceptor activity | 2.99E-04 |
| 23 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.99E-04 |
| 24 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.99E-04 |
| 25 | GO:0003938: IMP dehydrogenase activity | 2.99E-04 |
| 26 | GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity | 2.99E-04 |
| 27 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.92E-04 |
| 28 | GO:0008020: G-protein coupled photoreceptor activity | 4.92E-04 |
| 29 | GO:0008430: selenium binding | 4.92E-04 |
| 30 | GO:0004180: carboxypeptidase activity | 4.92E-04 |
| 31 | GO:0005354: galactose transmembrane transporter activity | 7.04E-04 |
| 32 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 7.04E-04 |
| 33 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 7.04E-04 |
| 34 | GO:0004506: squalene monooxygenase activity | 9.34E-04 |
| 35 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 9.34E-04 |
| 36 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 9.34E-04 |
| 37 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 9.34E-04 |
| 38 | GO:0048038: quinone binding | 1.08E-03 |
| 39 | GO:0008374: O-acyltransferase activity | 1.18E-03 |
| 40 | GO:0015144: carbohydrate transmembrane transporter activity | 1.36E-03 |
| 41 | GO:0005351: sugar:proton symporter activity | 1.58E-03 |
| 42 | GO:0008017: microtubule binding | 1.72E-03 |
| 43 | GO:0009927: histidine phosphotransfer kinase activity | 1.73E-03 |
| 44 | GO:0008236: serine-type peptidase activity | 1.91E-03 |
| 45 | GO:0004427: inorganic diphosphatase activity | 2.04E-03 |
| 46 | GO:0043022: ribosome binding | 2.36E-03 |
| 47 | GO:0046872: metal ion binding | 2.53E-03 |
| 48 | GO:0005375: copper ion transmembrane transporter activity | 2.69E-03 |
| 49 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 2.69E-03 |
| 50 | GO:0004673: protein histidine kinase activity | 3.79E-03 |
| 51 | GO:0004568: chitinase activity | 3.79E-03 |
| 52 | GO:0004672: protein kinase activity | 3.89E-03 |
| 53 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.38E-03 |
| 54 | GO:0003777: microtubule motor activity | 4.84E-03 |
| 55 | GO:0004871: signal transducer activity | 4.94E-03 |
| 56 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.00E-03 |
| 57 | GO:0008081: phosphoric diester hydrolase activity | 5.00E-03 |
| 58 | GO:0000155: phosphorelay sensor kinase activity | 5.00E-03 |
| 59 | GO:0004190: aspartic-type endopeptidase activity | 5.88E-03 |
| 60 | GO:0016829: lyase activity | 8.42E-03 |
| 61 | GO:0004252: serine-type endopeptidase activity | 8.64E-03 |
| 62 | GO:0030570: pectate lyase activity | 8.82E-03 |
| 63 | GO:0016760: cellulose synthase (UDP-forming) activity | 8.82E-03 |
| 64 | GO:0004527: exonuclease activity | 1.10E-02 |
| 65 | GO:0005355: glucose transmembrane transporter activity | 1.16E-02 |
| 66 | GO:0003743: translation initiation factor activity | 1.26E-02 |
| 67 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.28E-02 |
| 68 | GO:0004518: nuclease activity | 1.34E-02 |
| 69 | GO:0042802: identical protein binding | 1.37E-02 |
| 70 | GO:0016759: cellulose synthase activity | 1.46E-02 |
| 71 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.53E-02 |
| 72 | GO:0015250: water channel activity | 1.66E-02 |
| 73 | GO:0016788: hydrolase activity, acting on ester bonds | 1.70E-02 |
| 74 | GO:0030247: polysaccharide binding | 1.86E-02 |
| 75 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.86E-02 |
| 76 | GO:0005525: GTP binding | 2.36E-02 |
| 77 | GO:0003697: single-stranded DNA binding | 2.37E-02 |
| 78 | GO:0003993: acid phosphatase activity | 2.45E-02 |
| 79 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.60E-02 |
| 80 | GO:0042803: protein homodimerization activity | 2.60E-02 |
| 81 | GO:0004185: serine-type carboxypeptidase activity | 2.84E-02 |
| 82 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.00E-02 |
| 83 | GO:0009055: electron carrier activity | 3.28E-02 |
| 84 | GO:0003690: double-stranded DNA binding | 3.60E-02 |
| 85 | GO:0005515: protein binding | 4.11E-02 |
| 86 | GO:0004650: polygalacturonase activity | 4.23E-02 |
| 87 | GO:0016874: ligase activity | 4.32E-02 |
| 88 | GO:0016887: ATPase activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0017133: mitochondrial electron transfer flavoprotein complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 7.48E-09 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.10E-05 |
| 4 | GO:0031209: SCAR complex | 3.44E-05 |
| 5 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.31E-04 |
| 6 | GO:0005773: vacuole | 4.54E-04 |
| 7 | GO:0033281: TAT protein transport complex | 4.92E-04 |
| 8 | GO:0005871: kinesin complex | 7.67E-04 |
| 9 | GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing) | 9.34E-04 |
| 10 | GO:0030660: Golgi-associated vesicle membrane | 9.34E-04 |
| 11 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 9.34E-04 |
| 12 | GO:0046658: anchored component of plasma membrane | 2.32E-03 |
| 13 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.36E-03 |
| 14 | GO:0031305: integral component of mitochondrial inner membrane | 2.36E-03 |
| 15 | GO:0016604: nuclear body | 3.41E-03 |
| 16 | GO:0005874: microtubule | 3.55E-03 |
| 17 | GO:0005740: mitochondrial envelope | 3.79E-03 |
| 18 | GO:0005765: lysosomal membrane | 4.18E-03 |
| 19 | GO:0009574: preprophase band | 5.00E-03 |
| 20 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.88E-03 |
| 21 | GO:0005623: cell | 8.00E-03 |
| 22 | GO:0009524: phragmoplast | 8.21E-03 |
| 23 | GO:0009941: chloroplast envelope | 1.00E-02 |
| 24 | GO:0009536: plastid | 1.09E-02 |
| 25 | GO:0009504: cell plate | 1.22E-02 |
| 26 | GO:0005694: chromosome | 1.34E-02 |
| 27 | GO:0009295: nucleoid | 1.53E-02 |
| 28 | GO:0030529: intracellular ribonucleoprotein complex | 1.66E-02 |
| 29 | GO:0048046: apoplast | 1.87E-02 |
| 30 | GO:0009707: chloroplast outer membrane | 2.00E-02 |
| 31 | GO:0019005: SCF ubiquitin ligase complex | 2.00E-02 |
| 32 | GO:0005783: endoplasmic reticulum | 2.14E-02 |
| 33 | GO:0005794: Golgi apparatus | 2.42E-02 |
| 34 | GO:0005819: spindle | 2.52E-02 |
| 35 | GO:0005768: endosome | 2.68E-02 |
| 36 | GO:0031977: thylakoid lumen | 2.68E-02 |
| 37 | GO:0005856: cytoskeleton | 3.08E-02 |
| 38 | GO:0016021: integral component of membrane | 3.74E-02 |
| 39 | GO:0009505: plant-type cell wall | 4.04E-02 |
| 40 | GO:0016607: nuclear speck | 4.04E-02 |
| 41 | GO:0010008: endosome membrane | 4.04E-02 |
| 42 | GO:0005834: heterotrimeric G-protein complex | 4.14E-02 |
| 43 | GO:0005887: integral component of plasma membrane | 4.14E-02 |
| 44 | GO:0000139: Golgi membrane | 4.44E-02 |
| 45 | GO:0009706: chloroplast inner membrane | 4.51E-02 |
| 46 | GO:0009570: chloroplast stroma | 4.97E-02 |