co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G11650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010324: membrane invagination	0.00E+00
2	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
3	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
4	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
5	GO:0015690: aluminum cation transport	0.00E+00
6	GO:0010200: response to chitin	8.24E-07
7	GO:0006468: protein phosphorylation	1.84E-06
8	GO:0045088: regulation of innate immune response	1.63E-05
9	GO:0009697: salicylic acid biosynthetic process	2.66E-05
10	GO:0006979: response to oxidative stress	1.32E-04
11	GO:0031338: regulation of vesicle fusion	1.42E-04
12	GO:0048508: embryonic meristem development	1.42E-04
13	GO:0051938: L-glutamate import	1.42E-04
14	GO:0046256: 2,4,6-trinitrotoluene catabolic process	1.42E-04
15	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.42E-04
16	GO:0006643: membrane lipid metabolic process	1.42E-04
17	GO:0007229: integrin-mediated signaling pathway	1.42E-04
18	GO:0010150: leaf senescence	2.82E-04
19	GO:0012501: programmed cell death	2.87E-04
20	GO:0043091: L-arginine import	3.25E-04
21	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	3.25E-04
22	GO:0015802: basic amino acid transport	3.25E-04
23	GO:0009945: radial axis specification	3.25E-04
24	GO:0090630: activation of GTPase activity	5.33E-04
25	GO:0048281: inflorescence morphogenesis	5.33E-04
26	GO:1900055: regulation of leaf senescence	5.33E-04
27	GO:1900140: regulation of seedling development	5.33E-04
28	GO:0031348: negative regulation of defense response	6.76E-04
29	GO:0006952: defense response	7.14E-04
30	GO:0002679: respiratory burst involved in defense response	7.63E-04
31	GO:1901141: regulation of lignin biosynthetic process	1.01E-03
32	GO:0060548: negative regulation of cell death	1.01E-03
33	GO:0010483: pollen tube reception	1.01E-03
34	GO:0009646: response to absence of light	1.07E-03
35	GO:0010225: response to UV-C	1.28E-03
36	GO:0015691: cadmium ion transport	1.57E-03
37	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	1.57E-03
38	GO:0006828: manganese ion transport	1.57E-03
39	GO:0042372: phylloquinone biosynthetic process	1.88E-03
40	GO:0009942: longitudinal axis specification	1.88E-03
41	GO:0010044: response to aluminum ion	2.21E-03
42	GO:0046470: phosphatidylcholine metabolic process	2.21E-03
43	GO:0071446: cellular response to salicylic acid stimulus	2.21E-03
44	GO:0050829: defense response to Gram-negative bacterium	2.21E-03
45	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	2.21E-03
46	GO:0007166: cell surface receptor signaling pathway	2.25E-03
47	GO:0042742: defense response to bacterium	2.47E-03
48	GO:0030091: protein repair	2.56E-03
49	GO:0009867: jasmonic acid mediated signaling pathway	2.86E-03
50	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.93E-03
51	GO:0010099: regulation of photomorphogenesis	2.93E-03
52	GO:0009051: pentose-phosphate shunt, oxidative branch	3.31E-03
53	GO:0051865: protein autoubiquitination	3.31E-03
54	GO:0090333: regulation of stomatal closure	3.31E-03
55	GO:0009611: response to wounding	3.43E-03
56	GO:0008202: steroid metabolic process	3.71E-03
57	GO:0009970: cellular response to sulfate starvation	4.12E-03
58	GO:0007064: mitotic sister chromatid cohesion	4.12E-03
59	GO:0006535: cysteine biosynthetic process from serine	4.12E-03
60	GO:0031347: regulation of defense response	4.45E-03
61	GO:0006816: calcium ion transport	4.55E-03
62	GO:1903507: negative regulation of nucleic acid-templated transcription	4.55E-03
63	GO:0009809: lignin biosynthetic process	4.95E-03
64	GO:0006486: protein glycosylation	4.95E-03
65	GO:0008361: regulation of cell size	4.99E-03
66	GO:0050832: defense response to fungus	5.24E-03
67	GO:0006006: glucose metabolic process	5.45E-03
68	GO:0010540: basipetal auxin transport	5.92E-03
69	GO:0070588: calcium ion transmembrane transport	6.41E-03
70	GO:0009969: xyloglucan biosynthetic process	6.41E-03
71	GO:0009620: response to fungus	6.43E-03
72	GO:0032259: methylation	6.73E-03
73	GO:0009751: response to salicylic acid	6.98E-03
74	GO:2000377: regulation of reactive oxygen species metabolic process	7.42E-03
75	GO:0019344: cysteine biosynthetic process	7.42E-03
76	GO:0009742: brassinosteroid mediated signaling pathway	7.46E-03
77	GO:0003333: amino acid transmembrane transport	8.49E-03
78	GO:0007165: signal transduction	8.90E-03
79	GO:0071456: cellular response to hypoxia	9.05E-03
80	GO:2000022: regulation of jasmonic acid mediated signaling pathway	9.05E-03
81	GO:0009414: response to water deprivation	9.32E-03
82	GO:0009625: response to insect	9.62E-03
83	GO:0010584: pollen exine formation	1.02E-02
84	GO:0070417: cellular response to cold	1.08E-02
85	GO:0010118: stomatal movement	1.14E-02
86	GO:0042631: cellular response to water deprivation	1.14E-02
87	GO:0042391: regulation of membrane potential	1.14E-02
88	GO:0010197: polar nucleus fusion	1.20E-02
89	GO:0008654: phospholipid biosynthetic process	1.33E-02
90	GO:0000302: response to reactive oxygen species	1.39E-02
91	GO:0009630: gravitropism	1.46E-02
92	GO:0010468: regulation of gene expression	1.46E-02
93	GO:0016032: viral process	1.46E-02
94	GO:0019761: glucosinolate biosynthetic process	1.46E-02
95	GO:0009617: response to bacterium	1.46E-02
96	GO:0009409: response to cold	1.53E-02
97	GO:0035556: intracellular signal transduction	1.58E-02
98	GO:0009816: defense response to bacterium, incompatible interaction	1.88E-02
99	GO:0009627: systemic acquired resistance	1.96E-02
100	GO:0008219: cell death	2.19E-02
101	GO:0010311: lateral root formation	2.26E-02
102	GO:0009832: plant-type cell wall biogenesis	2.26E-02
103	GO:0009407: toxin catabolic process	2.34E-02
104	GO:0007568: aging	2.42E-02
105	GO:0048527: lateral root development	2.42E-02
106	GO:0010119: regulation of stomatal movement	2.42E-02
107	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.43E-02
108	GO:0046777: protein autophosphorylation	2.51E-02
109	GO:0045087: innate immune response	2.59E-02
110	GO:0030001: metal ion transport	2.84E-02
111	GO:0006897: endocytosis	2.93E-02
112	GO:0009737: response to abscisic acid	2.99E-02
113	GO:0042542: response to hydrogen peroxide	3.01E-02
114	GO:0009744: response to sucrose	3.10E-02
115	GO:0009636: response to toxic substance	3.37E-02
116	GO:0006855: drug transmembrane transport	3.46E-02
117	GO:0009846: pollen germination	3.65E-02
118	GO:0016310: phosphorylation	3.67E-02
119	GO:0009753: response to jasmonic acid	3.71E-02
120	GO:0048367: shoot system development	4.42E-02
121	GO:0009624: response to nematode	4.92E-02
122	GO:0016567: protein ubiquitination	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0016301: kinase activity	5.87E-06
3	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.42E-04
4	GO:0008909: isochorismate synthase activity	1.42E-04
5	GO:0019707: protein-cysteine S-acyltransferase activity	1.42E-04
6	GO:0005524: ATP binding	1.46E-04
7	GO:0004674: protein serine/threonine kinase activity	1.48E-04
8	GO:0008171: O-methyltransferase activity	2.13E-04
9	GO:0047364: desulfoglucosinolate sulfotransferase activity	3.25E-04
10	GO:0022821: potassium ion antiporter activity	3.25E-04
11	GO:0001671: ATPase activator activity	3.25E-04
12	GO:0042409: caffeoyl-CoA O-methyltransferase activity	5.33E-04
13	GO:0009001: serine O-acetyltransferase activity	7.63E-04
14	GO:0015189: L-lysine transmembrane transporter activity	7.63E-04
15	GO:0015181: arginine transmembrane transporter activity	7.63E-04
16	GO:0015368: calcium:cation antiporter activity	1.01E-03
17	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.01E-03
18	GO:0015369: calcium:proton antiporter activity	1.01E-03
19	GO:0005313: L-glutamate transmembrane transporter activity	1.01E-03
20	GO:0019901: protein kinase binding	1.14E-03
21	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.28E-03
22	GO:0017137: Rab GTPase binding	1.28E-03
23	GO:0004866: endopeptidase inhibitor activity	1.57E-03
24	GO:0004605: phosphatidate cytidylyltransferase activity	1.57E-03
25	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.88E-03
26	GO:0004012: phospholipid-translocating ATPase activity	1.88E-03
27	GO:0005261: cation channel activity	1.88E-03
28	GO:0005509: calcium ion binding	2.14E-03
29	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.21E-03
30	GO:0043295: glutathione binding	2.21E-03
31	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.56E-03
32	GO:0004033: aldo-keto reductase (NADP) activity	2.56E-03
33	GO:0008142: oxysterol binding	2.93E-03
34	GO:0004630: phospholipase D activity	2.93E-03
35	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.93E-03
36	GO:0008417: fucosyltransferase activity	3.31E-03
37	GO:0071949: FAD binding	3.31E-03
38	GO:0015174: basic amino acid transmembrane transporter activity	3.71E-03
39	GO:0015095: magnesium ion transmembrane transporter activity	5.45E-03
40	GO:0005388: calcium-transporting ATPase activity	5.45E-03
41	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.45E-03
42	GO:0005516: calmodulin binding	6.16E-03
43	GO:0030552: cAMP binding	6.41E-03
44	GO:0030553: cGMP binding	6.41E-03
45	GO:0008146: sulfotransferase activity	6.41E-03
46	GO:0003714: transcription corepressor activity	7.42E-03
47	GO:0009055: electron carrier activity	7.78E-03
48	GO:0051087: chaperone binding	7.95E-03
49	GO:0043424: protein histidine kinase binding	7.95E-03
50	GO:0005216: ion channel activity	7.95E-03
51	GO:0019706: protein-cysteine S-palmitoyltransferase activity	8.49E-03
52	GO:0004707: MAP kinase activity	8.49E-03
53	GO:0033612: receptor serine/threonine kinase binding	8.49E-03
54	GO:0005249: voltage-gated potassium channel activity	1.14E-02
55	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.14E-02
56	GO:0030551: cyclic nucleotide binding	1.14E-02
57	GO:0004197: cysteine-type endopeptidase activity	1.46E-02
58	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.67E-02
59	GO:0004672: protein kinase activity	1.72E-02
60	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.96E-02
61	GO:0004683: calmodulin-dependent protein kinase activity	2.03E-02
62	GO:0043531: ADP binding	2.07E-02
63	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.11E-02
64	GO:0005096: GTPase activator activity	2.26E-02
65	GO:0015238: drug transmembrane transporter activity	2.26E-02
66	GO:0004222: metalloendopeptidase activity	2.34E-02
67	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.42E-02
68	GO:0000987: core promoter proximal region sequence-specific DNA binding	2.67E-02
69	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.76E-02
70	GO:0050661: NADP binding	2.84E-02
71	GO:0004364: glutathione transferase activity	3.01E-02
72	GO:0035091: phosphatidylinositol binding	3.28E-02
73	GO:0015171: amino acid transmembrane transporter activity	4.12E-02
74	GO:0031625: ubiquitin protein ligase binding	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.54E-08
2	GO:0016021: integral component of membrane	2.60E-05
3	GO:0000138: Golgi trans cisterna	1.42E-04
4	GO:0005901: caveola	3.25E-04
5	GO:0005769: early endosome	4.63E-04
6	GO:0031012: extracellular matrix	5.45E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	6.41E-03
8	GO:0012505: endomembrane system	6.83E-03
9	GO:0005758: mitochondrial intermembrane space	7.42E-03
10	GO:0070469: respiratory chain	7.95E-03
11	GO:0009705: plant-type vacuole membrane	1.22E-02
12	GO:0032580: Golgi cisterna membrane	1.60E-02
13	GO:0000151: ubiquitin ligase complex	2.19E-02
14	GO:0000786: nucleosome	2.51E-02
15	GO:0005829: cytosol	3.32E-02
16	GO:0031966: mitochondrial membrane	3.65E-02
17	GO:0005887: integral component of plasma membrane	4.68E-02