Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G11520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006903: vesicle targeting0.00E+00
2GO:0006216: cytidine catabolic process0.00E+00
3GO:0006858: extracellular transport0.00E+00
4GO:0090400: stress-induced premature senescence0.00E+00
5GO:0048034: heme O biosynthetic process0.00E+00
6GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
7GO:1904250: positive regulation of age-related resistance0.00E+00
8GO:0010398: xylogalacturonan metabolic process0.00E+00
9GO:0016102: diterpenoid biosynthetic process0.00E+00
10GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
11GO:0072722: response to amitrole0.00E+00
12GO:0046686: response to cadmium ion1.01E-07
13GO:0006102: isocitrate metabolic process2.20E-06
14GO:0009407: toxin catabolic process2.85E-05
15GO:0055114: oxidation-reduction process3.00E-05
16GO:0006564: L-serine biosynthetic process3.97E-05
17GO:0006099: tricarboxylic acid cycle4.09E-05
18GO:0010120: camalexin biosynthetic process1.75E-04
19GO:0033306: phytol metabolic process1.80E-04
20GO:0042964: thioredoxin reduction1.80E-04
21GO:0006680: glucosylceramide catabolic process1.80E-04
22GO:0019432: triglyceride biosynthetic process2.13E-04
23GO:0048354: mucilage biosynthetic process involved in seed coat development2.55E-04
24GO:0045454: cell redox homeostasis3.22E-04
25GO:0006672: ceramide metabolic process4.05E-04
26GO:1901703: protein localization involved in auxin polar transport4.05E-04
27GO:1902000: homogentisate catabolic process4.05E-04
28GO:0042814: monopolar cell growth4.05E-04
29GO:0015709: thiosulfate transport4.05E-04
30GO:0071422: succinate transmembrane transport4.05E-04
31GO:0046939: nucleotide phosphorylation4.05E-04
32GO:0000162: tryptophan biosynthetic process6.38E-04
33GO:0010272: response to silver ion6.61E-04
34GO:0009072: aromatic amino acid family metabolic process6.61E-04
35GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity6.61E-04
36GO:0006591: ornithine metabolic process6.61E-04
37GO:0006556: S-adenosylmethionine biosynthetic process6.61E-04
38GO:0040009: regulation of growth rate6.61E-04
39GO:0006517: protein deglycosylation6.61E-04
40GO:0016998: cell wall macromolecule catabolic process8.51E-04
41GO:0015729: oxaloacetate transport9.45E-04
42GO:0080028: nitrile biosynthetic process9.45E-04
43GO:0006612: protein targeting to membrane9.45E-04
44GO:0006893: Golgi to plasma membrane transport9.45E-04
45GO:0045017: glycerolipid biosynthetic process9.45E-04
46GO:0045227: capsule polysaccharide biosynthetic process1.25E-03
47GO:0033358: UDP-L-arabinose biosynthetic process1.25E-03
48GO:0000919: cell plate assembly1.25E-03
49GO:0010188: response to microbial phytotoxin1.25E-03
50GO:0006878: cellular copper ion homeostasis1.25E-03
51GO:0006662: glycerol ether metabolic process1.37E-03
52GO:0009851: auxin biosynthetic process1.57E-03
53GO:0000304: response to singlet oxygen1.59E-03
54GO:0071423: malate transmembrane transport1.59E-03
55GO:0098719: sodium ion import across plasma membrane1.59E-03
56GO:0046283: anthocyanin-containing compound metabolic process1.59E-03
57GO:0010264: myo-inositol hexakisphosphate biosynthetic process1.96E-03
58GO:0060918: auxin transport1.96E-03
59GO:0009228: thiamine biosynthetic process1.96E-03
60GO:0035435: phosphate ion transmembrane transport1.96E-03
61GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione1.96E-03
62GO:0009972: cytidine deamination1.96E-03
63GO:0006561: proline biosynthetic process1.96E-03
64GO:0010252: auxin homeostasis2.03E-03
65GO:0006904: vesicle docking involved in exocytosis2.16E-03
66GO:0009082: branched-chain amino acid biosynthetic process2.35E-03
67GO:0009099: valine biosynthetic process2.35E-03
68GO:0080113: regulation of seed growth2.35E-03
69GO:0009615: response to virus2.42E-03
70GO:0080027: response to herbivore2.77E-03
71GO:1900056: negative regulation of leaf senescence2.77E-03
72GO:0071669: plant-type cell wall organization or biogenesis2.77E-03
73GO:1900057: positive regulation of leaf senescence2.77E-03
74GO:0008272: sulfate transport2.77E-03
75GO:0050829: defense response to Gram-negative bacterium2.77E-03
76GO:1902074: response to salt2.77E-03
77GO:0010150: leaf senescence2.90E-03
78GO:0043068: positive regulation of programmed cell death3.21E-03
79GO:0006491: N-glycan processing3.21E-03
80GO:0019375: galactolipid biosynthetic process3.21E-03
81GO:0050832: defense response to fungus3.37E-03
82GO:0009617: response to bacterium3.63E-03
83GO:0010043: response to zinc ion3.63E-03
84GO:0060321: acceptance of pollen3.67E-03
85GO:0019430: removal of superoxide radicals3.67E-03
86GO:0007186: G-protein coupled receptor signaling pathway3.67E-03
87GO:0010497: plasmodesmata-mediated intercellular transport3.67E-03
88GO:0009097: isoleucine biosynthetic process3.67E-03
89GO:0009821: alkaloid biosynthetic process4.15E-03
90GO:0006783: heme biosynthetic process4.15E-03
91GO:0034599: cellular response to oxidative stress4.16E-03
92GO:0009651: response to salt stress4.39E-03
93GO:0042742: defense response to bacterium4.46E-03
94GO:0006979: response to oxidative stress4.52E-03
95GO:0043067: regulation of programmed cell death4.65E-03
96GO:0009098: leucine biosynthetic process4.65E-03
97GO:2000280: regulation of root development4.65E-03
98GO:0051453: regulation of intracellular pH4.65E-03
99GO:0006887: exocytosis4.72E-03
100GO:0006032: chitin catabolic process5.18E-03
101GO:0009688: abscisic acid biosynthetic process5.18E-03
102GO:0043069: negative regulation of programmed cell death5.18E-03
103GO:0009733: response to auxin5.46E-03
104GO:0009682: induced systemic resistance5.72E-03
105GO:0052544: defense response by callose deposition in cell wall5.72E-03
106GO:0006415: translational termination5.72E-03
107GO:0000272: polysaccharide catabolic process5.72E-03
108GO:0009636: response to toxic substance5.75E-03
109GO:0006790: sulfur compound metabolic process6.28E-03
110GO:0006890: retrograde vesicle-mediated transport, Golgi to ER6.28E-03
111GO:0071365: cellular response to auxin stimulus6.28E-03
112GO:0009846: pollen germination6.43E-03
113GO:0010102: lateral root morphogenesis6.86E-03
114GO:0006807: nitrogen compound metabolic process6.86E-03
115GO:0009718: anthocyanin-containing compound biosynthetic process6.86E-03
116GO:0009225: nucleotide-sugar metabolic process8.08E-03
117GO:0010167: response to nitrate8.08E-03
118GO:0046854: phosphatidylinositol phosphorylation8.08E-03
119GO:0006096: glycolytic process8.16E-03
120GO:0019762: glucosinolate catabolic process8.71E-03
121GO:0009620: response to fungus8.97E-03
122GO:0045333: cellular respiration9.37E-03
123GO:0005992: trehalose biosynthetic process9.37E-03
124GO:0006874: cellular calcium ion homeostasis1.00E-02
125GO:0009751: response to salicylic acid1.07E-02
126GO:0030245: cellulose catabolic process1.14E-02
127GO:0030433: ubiquitin-dependent ERAD pathway1.14E-02
128GO:0006730: one-carbon metabolic process1.14E-02
129GO:0071456: cellular response to hypoxia1.14E-02
130GO:0009753: response to jasmonic acid1.19E-02
131GO:0009693: ethylene biosynthetic process1.22E-02
132GO:0006012: galactose metabolic process1.22E-02
133GO:0009058: biosynthetic process1.30E-02
134GO:0042147: retrograde transport, endosome to Golgi1.37E-02
135GO:0042744: hydrogen peroxide catabolic process1.40E-02
136GO:0042631: cellular response to water deprivation1.44E-02
137GO:0045489: pectin biosynthetic process1.52E-02
138GO:0048544: recognition of pollen1.60E-02
139GO:0006814: sodium ion transport1.60E-02
140GO:0010183: pollen tube guidance1.68E-02
141GO:0008654: phospholipid biosynthetic process1.68E-02
142GO:0006891: intra-Golgi vesicle-mediated transport1.77E-02
143GO:0032502: developmental process1.85E-02
144GO:0009630: gravitropism1.85E-02
145GO:0071281: cellular response to iron ion1.94E-02
146GO:1901657: glycosyl compound metabolic process1.94E-02
147GO:0009567: double fertilization forming a zygote and endosperm2.03E-02
148GO:0019760: glucosinolate metabolic process2.03E-02
149GO:0006464: cellular protein modification process2.03E-02
150GO:0006914: autophagy2.03E-02
151GO:0071805: potassium ion transmembrane transport2.11E-02
152GO:0015031: protein transport2.29E-02
153GO:0010029: regulation of seed germination2.39E-02
154GO:0009627: systemic acquired resistance2.48E-02
155GO:0006974: cellular response to DNA damage stimulus2.48E-02
156GO:0006888: ER to Golgi vesicle-mediated transport2.58E-02
157GO:0016049: cell growth2.68E-02
158GO:0008219: cell death2.77E-02
159GO:0009860: pollen tube growth2.85E-02
160GO:0010311: lateral root formation2.87E-02
161GO:0006499: N-terminal protein myristoylation2.97E-02
162GO:0009723: response to ethylene3.06E-02
163GO:0048527: lateral root development3.08E-02
164GO:0045087: innate immune response3.28E-02
165GO:0006839: mitochondrial transport3.60E-02
166GO:0006897: endocytosis3.71E-02
167GO:0042542: response to hydrogen peroxide3.82E-02
168GO:0051707: response to other organism3.93E-02
169GO:0009926: auxin polar transport3.93E-02
170GO:0031347: regulation of defense response4.50E-02
171GO:0042538: hyperosmotic salinity response4.62E-02
172GO:0009664: plant-type cell wall organization4.62E-02
173GO:0006629: lipid metabolic process4.81E-02
RankGO TermAdjusted P value
1GO:0051766: inositol trisphosphate kinase activity0.00E+00
2GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
3GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
4GO:0080013: (E,E)-geranyllinalool synthase activity0.00E+00
5GO:0047844: deoxycytidine deaminase activity0.00E+00
6GO:0008495: protoheme IX farnesyltransferase activity0.00E+00
7GO:0001729: ceramide kinase activity0.00E+00
8GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
9GO:0016034: maleylacetoacetate isomerase activity0.00E+00
10GO:0004449: isocitrate dehydrogenase (NAD+) activity3.81E-08
11GO:0004601: peroxidase activity1.56E-05
12GO:0004364: glutathione transferase activity5.67E-05
13GO:0043295: glutathione binding1.09E-04
14GO:0004791: thioredoxin-disulfide reductase activity1.17E-04
15GO:0000287: magnesium ion binding1.43E-04
16GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity1.80E-04
17GO:2001227: quercitrin binding1.80E-04
18GO:0004425: indole-3-glycerol-phosphate synthase activity1.80E-04
19GO:0000824: inositol tetrakisphosphate 3-kinase activity1.80E-04
20GO:0033984: indole-3-glycerol-phosphate lyase activity1.80E-04
21GO:0070401: NADP+ binding1.80E-04
22GO:0071617: lysophospholipid acyltransferase activity1.80E-04
23GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity1.80E-04
24GO:0047326: inositol tetrakisphosphate 5-kinase activity1.80E-04
25GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity1.80E-04
26GO:0048037: cofactor binding1.80E-04
27GO:0004348: glucosylceramidase activity1.80E-04
28GO:0019786: Atg8-specific protease activity1.80E-04
29GO:2001147: camalexin binding1.80E-04
30GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity1.80E-04
31GO:0004649: poly(ADP-ribose) glycohydrolase activity1.80E-04
32GO:0016229: steroid dehydrogenase activity1.80E-04
33GO:0004743: pyruvate kinase activity2.55E-04
34GO:0030955: potassium ion binding2.55E-04
35GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity4.05E-04
36GO:0004617: phosphoglycerate dehydrogenase activity4.05E-04
37GO:1990585: hydroxyproline O-arabinosyltransferase activity4.05E-04
38GO:0004775: succinate-CoA ligase (ADP-forming) activity4.05E-04
39GO:0019172: glyoxalase III activity4.05E-04
40GO:0019779: Atg8 activating enzyme activity4.05E-04
41GO:0015117: thiosulfate transmembrane transporter activity4.05E-04
42GO:1901677: phosphate transmembrane transporter activity4.05E-04
43GO:0004776: succinate-CoA ligase (GDP-forming) activity4.05E-04
44GO:0052739: phosphatidylserine 1-acylhydrolase activity4.05E-04
45GO:0005310: dicarboxylic acid transmembrane transporter activity6.61E-04
46GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity6.61E-04
47GO:0003955: NAD(P)H dehydrogenase (quinone) activity6.61E-04
48GO:0015141: succinate transmembrane transporter activity6.61E-04
49GO:0004478: methionine adenosyltransferase activity6.61E-04
50GO:0051287: NAD binding8.21E-04
51GO:0052655: L-valine transaminase activity9.45E-04
52GO:0019201: nucleotide kinase activity9.45E-04
53GO:0015131: oxaloacetate transmembrane transporter activity9.45E-04
54GO:0004416: hydroxyacylglutathione hydrolase activity9.45E-04
55GO:0016149: translation release factor activity, codon specific9.45E-04
56GO:0016656: monodehydroascorbate reductase (NADH) activity9.45E-04
57GO:0052656: L-isoleucine transaminase activity9.45E-04
58GO:0052654: L-leucine transaminase activity9.45E-04
59GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity9.45E-04
60GO:0017077: oxidative phosphorylation uncoupler activity9.45E-04
61GO:0047134: protein-disulfide reductase activity1.18E-03
62GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.25E-03
63GO:0004084: branched-chain-amino-acid transaminase activity1.25E-03
64GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity1.25E-03
65GO:0004031: aldehyde oxidase activity1.25E-03
66GO:0050302: indole-3-acetaldehyde oxidase activity1.25E-03
67GO:0019776: Atg8 ligase activity1.25E-03
68GO:0004930: G-protein coupled receptor activity1.25E-03
69GO:0010279: indole-3-acetic acid amido synthetase activity1.25E-03
70GO:0004659: prenyltransferase activity1.25E-03
71GO:0050373: UDP-arabinose 4-epimerase activity1.25E-03
72GO:0004834: tryptophan synthase activity1.25E-03
73GO:0015035: protein disulfide oxidoreductase activity1.51E-03
74GO:0008374: O-acyltransferase activity1.59E-03
75GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.91E-03
76GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity1.96E-03
77GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity1.96E-03
78GO:0035252: UDP-xylosyltransferase activity1.96E-03
79GO:0051920: peroxiredoxin activity2.35E-03
80GO:0004126: cytidine deaminase activity2.35E-03
81GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.35E-03
82GO:0004017: adenylate kinase activity2.35E-03
83GO:0004144: diacylglycerol O-acyltransferase activity2.35E-03
84GO:0003978: UDP-glucose 4-epimerase activity2.35E-03
85GO:0015140: malate transmembrane transporter activity2.77E-03
86GO:0016209: antioxidant activity3.21E-03
87GO:0004033: aldo-keto reductase (NADP) activity3.21E-03
88GO:0004311: farnesyltranstransferase activity3.21E-03
89GO:0008970: phosphatidylcholine 1-acylhydrolase activity3.67E-03
90GO:0003951: NAD+ kinase activity3.67E-03
91GO:0003747: translation release factor activity4.15E-03
92GO:0009672: auxin:proton symporter activity4.65E-03
93GO:0016844: strictosidine synthase activity4.65E-03
94GO:0004568: chitinase activity5.18E-03
95GO:0003824: catalytic activity5.24E-03
96GO:0015386: potassium:proton antiporter activity5.72E-03
97GO:0008794: arsenate reductase (glutaredoxin) activity5.72E-03
98GO:0015116: sulfate transmembrane transporter activity6.28E-03
99GO:0010329: auxin efflux transmembrane transporter activity6.86E-03
100GO:0008061: chitin binding8.08E-03
101GO:0004970: ionotropic glutamate receptor activity8.08E-03
102GO:0005217: intracellular ligand-gated ion channel activity8.08E-03
103GO:0005507: copper ion binding9.42E-03
104GO:0010333: terpene synthase activity1.07E-02
105GO:0008810: cellulase activity1.22E-02
106GO:0008080: N-acetyltransferase activity1.52E-02
107GO:0001085: RNA polymerase II transcription factor binding1.52E-02
108GO:0005199: structural constituent of cell wall1.52E-02
109GO:0005506: iron ion binding1.56E-02
110GO:0010181: FMN binding1.60E-02
111GO:0004518: nuclease activity1.85E-02
112GO:0015385: sodium:proton antiporter activity1.94E-02
113GO:0016597: amino acid binding2.20E-02
114GO:0102483: scopolin beta-glucosidase activity2.58E-02
115GO:0016798: hydrolase activity, acting on glycosyl bonds2.58E-02
116GO:0043531: ADP binding2.90E-02
117GO:0050660: flavin adenine dinucleotide binding3.06E-02
118GO:0030145: manganese ion binding3.08E-02
119GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding3.08E-02
120GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.08E-02
121GO:0020037: heme binding3.15E-02
122GO:0030246: carbohydrate binding3.26E-02
123GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.28E-02
124GO:0008422: beta-glucosidase activity3.50E-02
125GO:0004712: protein serine/threonine/tyrosine kinase activity3.50E-02
126GO:0042803: protein homodimerization activity4.10E-02
127GO:0051537: 2 iron, 2 sulfur cluster binding4.16E-02
128GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen4.22E-02
129GO:0003924: GTPase activity4.81E-02
130GO:0005509: calcium ion binding4.87E-02
131GO:0016298: lipase activity4.98E-02
RankGO TermAdjusted P value
1GO:0005829: cytosol5.85E-05
2GO:0005886: plasma membrane6.26E-04
3GO:0009530: primary cell wall6.61E-04
4GO:0005737: cytoplasm8.84E-04
5GO:0005775: vacuolar lumen9.45E-04
6GO:0070062: extracellular exosome9.45E-04
7GO:0005776: autophagosome1.25E-03
8GO:0000145: exocyst1.79E-03
9GO:0032580: Golgi cisterna membrane2.03E-03
10GO:0005618: cell wall2.16E-03
11GO:0009506: plasmodesma2.71E-03
12GO:0000421: autophagosome membrane3.21E-03
13GO:0031090: organelle membrane4.15E-03
14GO:0090404: pollen tube tip5.72E-03
15GO:0005856: cytoskeleton5.75E-03
16GO:0005794: Golgi apparatus6.49E-03
17GO:0031410: cytoplasmic vesicle1.14E-02
18GO:0005773: vacuole1.17E-02
19GO:0009524: phragmoplast1.30E-02
20GO:0009504: cell plate1.68E-02
21GO:0009570: chloroplast stroma1.83E-02
22GO:0016592: mediator complex1.85E-02
23GO:0071944: cell periphery1.94E-02
24GO:0005667: transcription factor complex2.48E-02
25GO:0009707: chloroplast outer membrane2.77E-02
26GO:0005774: vacuolar membrane3.74E-02
27GO:0090406: pollen tube3.93E-02
28GO:0005743: mitochondrial inner membrane4.48E-02
29GO:0005768: endosome4.72E-02
30GO:0000502: proteasome complex4.86E-02
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Gene type



Gene DE type