co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G09680

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
2	GO:0010200: response to chitin	3.60E-08
3	GO:0045088: regulation of innate immune response	5.37E-06
4	GO:0046470: phosphatidylcholine metabolic process	2.70E-05
5	GO:0051938: L-glutamate import	7.39E-05
6	GO:0010421: hydrogen peroxide-mediated programmed cell death	7.39E-05
7	GO:0006643: membrane lipid metabolic process	7.39E-05
8	GO:0007229: integrin-mediated signaling pathway	7.39E-05
9	GO:0080157: regulation of plant-type cell wall organization or biogenesis	7.39E-05
10	GO:0050691: regulation of defense response to virus by host	7.39E-05
11	GO:0031338: regulation of vesicle fusion	7.39E-05
12	GO:0043091: L-arginine import	1.77E-04
13	GO:0015802: basic amino acid transport	1.77E-04
14	GO:0006952: defense response	2.33E-04
15	GO:0048281: inflorescence morphogenesis	2.99E-04
16	GO:1900140: regulation of seedling development	2.99E-04
17	GO:0090630: activation of GTPase activity	2.99E-04
18	GO:0002679: respiratory burst involved in defense response	4.32E-04
19	GO:0010306: rhamnogalacturonan II biosynthetic process	4.32E-04
20	GO:0006468: protein phosphorylation	5.46E-04
21	GO:0060548: negative regulation of cell death	5.75E-04
22	GO:0033320: UDP-D-xylose biosynthetic process	5.75E-04
23	GO:0010483: pollen tube reception	5.75E-04
24	GO:0010225: response to UV-C	7.29E-04
25	GO:0009697: salicylic acid biosynthetic process	7.29E-04
26	GO:0009816: defense response to bacterium, incompatible interaction	7.97E-04
27	GO:0042732: D-xylose metabolic process	8.91E-04
28	GO:0006828: manganese ion transport	8.91E-04
29	GO:0015691: cadmium ion transport	8.91E-04
30	GO:0042372: phylloquinone biosynthetic process	1.06E-03
31	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.24E-03
32	GO:0010044: response to aluminum ion	1.24E-03
33	GO:0043562: cellular response to nitrogen levels	1.63E-03
34	GO:0009051: pentose-phosphate shunt, oxidative branch	1.83E-03
35	GO:0051865: protein autoubiquitination	1.83E-03
36	GO:0090333: regulation of stomatal closure	1.83E-03
37	GO:0009809: lignin biosynthetic process	2.08E-03
38	GO:0006486: protein glycosylation	2.08E-03
39	GO:0032259: methylation	2.21E-03
40	GO:0007064: mitotic sister chromatid cohesion	2.28E-03
41	GO:0006816: calcium ion transport	2.51E-03
42	GO:0012501: programmed cell death	2.75E-03
43	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	2.75E-03
44	GO:0006006: glucose metabolic process	3.00E-03
45	GO:0055046: microgametogenesis	3.00E-03
46	GO:0009742: brassinosteroid mediated signaling pathway	3.12E-03
47	GO:0002237: response to molecule of bacterial origin	3.25E-03
48	GO:0010540: basipetal auxin transport	3.25E-03
49	GO:0050832: defense response to fungus	3.50E-03
50	GO:0009225: nucleotide-sugar metabolic process	3.51E-03
51	GO:0070588: calcium ion transmembrane transport	3.51E-03
52	GO:0009969: xyloglucan biosynthetic process	3.51E-03
53	GO:0003333: amino acid transmembrane transport	4.63E-03
54	GO:0009814: defense response, incompatible interaction	4.93E-03
55	GO:0031348: negative regulation of defense response	4.93E-03
56	GO:0010584: pollen exine formation	5.54E-03
57	GO:0042147: retrograde transport, endosome to Golgi	5.86E-03
58	GO:0010468: regulation of gene expression	6.03E-03
59	GO:0042391: regulation of membrane potential	6.18E-03
60	GO:0010118: stomatal movement	6.18E-03
61	GO:0010197: polar nucleus fusion	6.51E-03
62	GO:0008654: phospholipid biosynthetic process	7.19E-03
63	GO:0006891: intra-Golgi vesicle-mediated transport	7.53E-03
64	GO:0007165: signal transduction	7.68E-03
65	GO:0009630: gravitropism	7.89E-03
66	GO:0001666: response to hypoxia	9.74E-03
67	GO:0009627: systemic acquired resistance	1.05E-02
68	GO:0008219: cell death	1.17E-02
69	GO:0042742: defense response to bacterium	1.18E-02
70	GO:0006979: response to oxidative stress	1.19E-02
71	GO:0009832: plant-type cell wall biogenesis	1.22E-02
72	GO:0010119: regulation of stomatal movement	1.30E-02
73	GO:0016042: lipid catabolic process	1.40E-02
74	GO:0030001: metal ion transport	1.52E-02
75	GO:0042542: response to hydrogen peroxide	1.61E-02
76	GO:0031347: regulation of defense response	1.90E-02
77	GO:0009846: pollen germination	1.95E-02
78	GO:0048367: shoot system development	2.37E-02
79	GO:0018105: peptidyl-serine phosphorylation	2.69E-02
80	GO:0035556: intracellular signal transduction	2.70E-02
81	GO:0010150: leaf senescence	3.89E-02
82	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.22E-02
83	GO:0007166: cell surface receptor signaling pathway	4.28E-02
84	GO:0009617: response to bacterium	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.53E-05
3	GO:0004630: phospholipase D activity	4.53E-05
4	GO:0008909: isochorismate synthase activity	7.39E-05
5	GO:0031127: alpha-(1,2)-fucosyltransferase activity	7.39E-05
6	GO:0008171: O-methyltransferase activity	8.25E-05
7	GO:0022821: potassium ion antiporter activity	1.77E-04
8	GO:0001671: ATPase activator activity	1.77E-04
9	GO:0042409: caffeoyl-CoA O-methyltransferase activity	2.99E-04
10	GO:0015181: arginine transmembrane transporter activity	4.32E-04
11	GO:0015189: L-lysine transmembrane transporter activity	4.32E-04
12	GO:0015369: calcium:proton antiporter activity	5.75E-04
13	GO:0005313: L-glutamate transmembrane transporter activity	5.75E-04
14	GO:0015368: calcium:cation antiporter activity	5.75E-04
15	GO:0004345: glucose-6-phosphate dehydrogenase activity	5.75E-04
16	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	7.29E-04
17	GO:0017137: Rab GTPase binding	7.29E-04
18	GO:0035252: UDP-xylosyltransferase activity	8.91E-04
19	GO:0048040: UDP-glucuronate decarboxylase activity	8.91E-04
20	GO:0004605: phosphatidate cytidylyltransferase activity	8.91E-04
21	GO:0004012: phospholipid-translocating ATPase activity	1.06E-03
22	GO:0070403: NAD+ binding	1.06E-03
23	GO:0004143: diacylglycerol kinase activity	1.24E-03
24	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	1.24E-03
25	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.43E-03
26	GO:0005516: calmodulin binding	1.61E-03
27	GO:0003951: NAD+ kinase activity	1.63E-03
28	GO:0008417: fucosyltransferase activity	1.83E-03
29	GO:0015174: basic amino acid transmembrane transporter activity	2.05E-03
30	GO:0005509: calcium ion binding	2.23E-03
31	GO:0005388: calcium-transporting ATPase activity	3.00E-03
32	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.00E-03
33	GO:0015095: magnesium ion transmembrane transporter activity	3.00E-03
34	GO:0030553: cGMP binding	3.51E-03
35	GO:0030552: cAMP binding	3.51E-03
36	GO:0005216: ion channel activity	4.34E-03
37	GO:0051087: chaperone binding	4.34E-03
38	GO:0004707: MAP kinase activity	4.63E-03
39	GO:0033612: receptor serine/threonine kinase binding	4.63E-03
40	GO:0030551: cyclic nucleotide binding	6.18E-03
41	GO:0005249: voltage-gated potassium channel activity	6.18E-03
42	GO:0005524: ATP binding	6.34E-03
43	GO:0010181: FMN binding	6.84E-03
44	GO:0004197: cysteine-type endopeptidase activity	7.89E-03
45	GO:0043531: ADP binding	8.58E-03
46	GO:0016301: kinase activity	9.76E-03
47	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.05E-02
48	GO:0004683: calmodulin-dependent protein kinase activity	1.09E-02
49	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.13E-02
50	GO:0005096: GTPase activator activity	1.22E-02
51	GO:0004222: metalloendopeptidase activity	1.26E-02
52	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.48E-02
53	GO:0050661: NADP binding	1.52E-02
54	GO:0004672: protein kinase activity	1.92E-02
55	GO:0016298: lipase activity	2.10E-02
56	GO:0015171: amino acid transmembrane transporter activity	2.21E-02
57	GO:0004674: protein serine/threonine kinase activity	2.79E-02
58	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.70E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	4.87E-04
2	GO:0032580: Golgi cisterna membrane	6.38E-04
3	GO:0016021: integral component of membrane	7.49E-04
4	GO:0012505: endomembrane system	2.86E-03
5	GO:0031012: extracellular matrix	3.00E-03
6	GO:0030176: integral component of endoplasmic reticulum membrane	3.51E-03
7	GO:0005769: early endosome	3.78E-03
8	GO:0005794: Golgi apparatus	4.04E-03
9	GO:0009705: plant-type vacuole membrane	5.06E-03
10	GO:0005887: integral component of plasma membrane	1.95E-02
11	GO:0005773: vacuole	3.11E-02
12	GO:0016020: membrane	4.76E-02