GO Enrichment Analysis of Co-expressed Genes with
AT5G09660
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 4 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 5 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 6 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 7 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 8 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 9.01E-10 |
| 10 | GO:0015979: photosynthesis | 1.60E-07 |
| 11 | GO:0090391: granum assembly | 5.01E-06 |
| 12 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.16E-05 |
| 13 | GO:0055114: oxidation-reduction process | 1.50E-05 |
| 14 | GO:0010207: photosystem II assembly | 1.76E-05 |
| 15 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.57E-05 |
| 16 | GO:0010114: response to red light | 5.02E-05 |
| 17 | GO:0009228: thiamine biosynthetic process | 5.21E-05 |
| 18 | GO:0010189: vitamin E biosynthetic process | 7.27E-05 |
| 19 | GO:0071277: cellular response to calcium ion | 1.67E-04 |
| 20 | GO:0046467: membrane lipid biosynthetic process | 1.67E-04 |
| 21 | GO:0015671: oxygen transport | 1.67E-04 |
| 22 | GO:0019544: arginine catabolic process to glutamate | 1.67E-04 |
| 23 | GO:0006098: pentose-phosphate shunt | 1.91E-04 |
| 24 | GO:0015995: chlorophyll biosynthetic process | 2.61E-04 |
| 25 | GO:0071457: cellular response to ozone | 3.78E-04 |
| 26 | GO:0060151: peroxisome localization | 3.78E-04 |
| 27 | GO:0051645: Golgi localization | 3.78E-04 |
| 28 | GO:0006094: gluconeogenesis | 4.10E-04 |
| 29 | GO:0010143: cutin biosynthetic process | 4.63E-04 |
| 30 | GO:0006810: transport | 5.71E-04 |
| 31 | GO:0051646: mitochondrion localization | 6.19E-04 |
| 32 | GO:0090436: leaf pavement cell development | 6.19E-04 |
| 33 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.02E-04 |
| 34 | GO:0071484: cellular response to light intensity | 8.83E-04 |
| 35 | GO:0006096: glycolytic process | 1.01E-03 |
| 36 | GO:0042631: cellular response to water deprivation | 1.15E-03 |
| 37 | GO:0006546: glycine catabolic process | 1.17E-03 |
| 38 | GO:0071486: cellular response to high light intensity | 1.17E-03 |
| 39 | GO:0009765: photosynthesis, light harvesting | 1.17E-03 |
| 40 | GO:0045727: positive regulation of translation | 1.17E-03 |
| 41 | GO:0015994: chlorophyll metabolic process | 1.17E-03 |
| 42 | GO:0006564: L-serine biosynthetic process | 1.48E-03 |
| 43 | GO:0010236: plastoquinone biosynthetic process | 1.48E-03 |
| 44 | GO:0006465: signal peptide processing | 1.48E-03 |
| 45 | GO:0071493: cellular response to UV-B | 1.48E-03 |
| 46 | GO:1902456: regulation of stomatal opening | 1.83E-03 |
| 47 | GO:0010190: cytochrome b6f complex assembly | 1.83E-03 |
| 48 | GO:0042549: photosystem II stabilization | 1.83E-03 |
| 49 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.83E-03 |
| 50 | GO:0009854: oxidative photosynthetic carbon pathway | 2.19E-03 |
| 51 | GO:0071333: cellular response to glucose stimulus | 2.19E-03 |
| 52 | GO:0006633: fatty acid biosynthetic process | 2.25E-03 |
| 53 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.58E-03 |
| 54 | GO:0009645: response to low light intensity stimulus | 2.58E-03 |
| 55 | GO:0010196: nonphotochemical quenching | 2.58E-03 |
| 56 | GO:0018298: protein-chromophore linkage | 2.84E-03 |
| 57 | GO:0009704: de-etiolation | 2.99E-03 |
| 58 | GO:0050821: protein stabilization | 2.99E-03 |
| 59 | GO:0008610: lipid biosynthetic process | 2.99E-03 |
| 60 | GO:0009642: response to light intensity | 2.99E-03 |
| 61 | GO:0010218: response to far red light | 3.12E-03 |
| 62 | GO:0009657: plastid organization | 3.41E-03 |
| 63 | GO:0019430: removal of superoxide radicals | 3.41E-03 |
| 64 | GO:0032544: plastid translation | 3.41E-03 |
| 65 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 3.41E-03 |
| 66 | GO:0071482: cellular response to light stimulus | 3.41E-03 |
| 67 | GO:0009637: response to blue light | 3.58E-03 |
| 68 | GO:0009853: photorespiration | 3.58E-03 |
| 69 | GO:0034599: cellular response to oxidative stress | 3.75E-03 |
| 70 | GO:0019432: triglyceride biosynthetic process | 3.86E-03 |
| 71 | GO:0090333: regulation of stomatal closure | 3.86E-03 |
| 72 | GO:0006783: heme biosynthetic process | 3.86E-03 |
| 73 | GO:0006631: fatty acid metabolic process | 4.26E-03 |
| 74 | GO:0005982: starch metabolic process | 4.33E-03 |
| 75 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.33E-03 |
| 76 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.81E-03 |
| 77 | GO:0043085: positive regulation of catalytic activity | 5.32E-03 |
| 78 | GO:0000272: polysaccharide catabolic process | 5.32E-03 |
| 79 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.32E-03 |
| 80 | GO:0002213: defense response to insect | 5.84E-03 |
| 81 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.84E-03 |
| 82 | GO:0006364: rRNA processing | 6.21E-03 |
| 83 | GO:0009409: response to cold | 6.28E-03 |
| 84 | GO:0030048: actin filament-based movement | 6.38E-03 |
| 85 | GO:0006006: glucose metabolic process | 6.38E-03 |
| 86 | GO:0009767: photosynthetic electron transport chain | 6.38E-03 |
| 87 | GO:0019253: reductive pentose-phosphate cycle | 6.93E-03 |
| 88 | GO:0009266: response to temperature stimulus | 6.93E-03 |
| 89 | GO:0048467: gynoecium development | 6.93E-03 |
| 90 | GO:0010025: wax biosynthetic process | 8.10E-03 |
| 91 | GO:0009695: jasmonic acid biosynthetic process | 9.33E-03 |
| 92 | GO:0016114: terpenoid biosynthetic process | 9.97E-03 |
| 93 | GO:0009269: response to desiccation | 9.97E-03 |
| 94 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.06E-02 |
| 95 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.06E-02 |
| 96 | GO:0019748: secondary metabolic process | 1.06E-02 |
| 97 | GO:0071215: cellular response to abscisic acid stimulus | 1.13E-02 |
| 98 | GO:0042335: cuticle development | 1.34E-02 |
| 99 | GO:0042742: defense response to bacterium | 1.37E-02 |
| 100 | GO:0071472: cellular response to salt stress | 1.41E-02 |
| 101 | GO:0010154: fruit development | 1.41E-02 |
| 102 | GO:0006520: cellular amino acid metabolic process | 1.41E-02 |
| 103 | GO:0006662: glycerol ether metabolic process | 1.41E-02 |
| 104 | GO:0015986: ATP synthesis coupled proton transport | 1.49E-02 |
| 105 | GO:0019252: starch biosynthetic process | 1.56E-02 |
| 106 | GO:0009791: post-embryonic development | 1.56E-02 |
| 107 | GO:0010193: response to ozone | 1.64E-02 |
| 108 | GO:0032502: developmental process | 1.72E-02 |
| 109 | GO:0009630: gravitropism | 1.72E-02 |
| 110 | GO:0009735: response to cytokinin | 1.76E-02 |
| 111 | GO:0010090: trichome morphogenesis | 1.80E-02 |
| 112 | GO:0009416: response to light stimulus | 1.97E-02 |
| 113 | GO:0051607: defense response to virus | 2.04E-02 |
| 114 | GO:0010027: thylakoid membrane organization | 2.13E-02 |
| 115 | GO:0006974: cellular response to DNA damage stimulus | 2.30E-02 |
| 116 | GO:0042128: nitrate assimilation | 2.30E-02 |
| 117 | GO:0009658: chloroplast organization | 2.38E-02 |
| 118 | GO:0016049: cell growth | 2.48E-02 |
| 119 | GO:0016311: dephosphorylation | 2.48E-02 |
| 120 | GO:0009817: defense response to fungus, incompatible interaction | 2.57E-02 |
| 121 | GO:0046686: response to cadmium ion | 2.64E-02 |
| 122 | GO:0080167: response to karrikin | 2.95E-02 |
| 123 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.05E-02 |
| 124 | GO:0000209: protein polyubiquitination | 3.75E-02 |
| 125 | GO:0006869: lipid transport | 3.86E-02 |
| 126 | GO:0009644: response to high light intensity | 3.86E-02 |
| 127 | GO:0006855: drug transmembrane transport | 4.07E-02 |
| 128 | GO:0032259: methylation | 4.15E-02 |
| 129 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.62E-02 |
| 130 | GO:0010224: response to UV-B | 4.62E-02 |
| 131 | GO:0006417: regulation of translation | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 2 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 3 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 4 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 5 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 7 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 8 | GO:0004768: stearoyl-CoA 9-desaturase activity | 0.00E+00 |
| 9 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 10 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 11 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 12 | GO:0009011: starch synthase activity | 2.16E-05 |
| 13 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.16E-05 |
| 14 | GO:0004332: fructose-bisphosphate aldolase activity | 5.21E-05 |
| 15 | GO:0009374: biotin binding | 1.67E-04 |
| 16 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.67E-04 |
| 17 | GO:0005344: oxygen transporter activity | 1.67E-04 |
| 18 | GO:0035671: enone reductase activity | 1.67E-04 |
| 19 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.67E-04 |
| 20 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.78E-04 |
| 21 | GO:0019172: glyoxalase III activity | 3.78E-04 |
| 22 | GO:0008883: glutamyl-tRNA reductase activity | 3.78E-04 |
| 23 | GO:0047746: chlorophyllase activity | 3.78E-04 |
| 24 | GO:0042389: omega-3 fatty acid desaturase activity | 3.78E-04 |
| 25 | GO:0010297: heteropolysaccharide binding | 3.78E-04 |
| 26 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.78E-04 |
| 27 | GO:0004047: aminomethyltransferase activity | 3.78E-04 |
| 28 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 3.78E-04 |
| 29 | GO:0033201: alpha-1,4-glucan synthase activity | 3.78E-04 |
| 30 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 3.78E-04 |
| 31 | GO:0031409: pigment binding | 5.76E-04 |
| 32 | GO:0042802: identical protein binding | 5.87E-04 |
| 33 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 6.19E-04 |
| 34 | GO:0004373: glycogen (starch) synthase activity | 6.19E-04 |
| 35 | GO:0050734: hydroxycinnamoyltransferase activity | 6.19E-04 |
| 36 | GO:0051287: NAD binding | 7.20E-04 |
| 37 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 8.83E-04 |
| 38 | GO:0008453: alanine-glyoxylate transaminase activity | 1.17E-03 |
| 39 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.48E-03 |
| 40 | GO:0003989: acetyl-CoA carboxylase activity | 1.48E-03 |
| 41 | GO:0048038: quinone binding | 1.52E-03 |
| 42 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.83E-03 |
| 43 | GO:0004784: superoxide dismutase activity | 1.83E-03 |
| 44 | GO:0004462: lactoylglutathione lyase activity | 1.83E-03 |
| 45 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.83E-03 |
| 46 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.19E-03 |
| 47 | GO:0016168: chlorophyll binding | 2.30E-03 |
| 48 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.41E-03 |
| 49 | GO:0015078: hydrogen ion transmembrane transporter activity | 3.41E-03 |
| 50 | GO:0050661: NADP binding | 4.08E-03 |
| 51 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.33E-03 |
| 52 | GO:0004185: serine-type carboxypeptidase activity | 4.61E-03 |
| 53 | GO:0030234: enzyme regulator activity | 4.81E-03 |
| 54 | GO:0008047: enzyme activator activity | 4.81E-03 |
| 55 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.99E-03 |
| 56 | GO:0016491: oxidoreductase activity | 5.98E-03 |
| 57 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.38E-03 |
| 58 | GO:0004565: beta-galactosidase activity | 6.38E-03 |
| 59 | GO:0008266: poly(U) RNA binding | 6.93E-03 |
| 60 | GO:0003774: motor activity | 6.93E-03 |
| 61 | GO:0003727: single-stranded RNA binding | 1.20E-02 |
| 62 | GO:0005509: calcium ion binding | 1.21E-02 |
| 63 | GO:0047134: protein-disulfide reductase activity | 1.27E-02 |
| 64 | GO:0016787: hydrolase activity | 1.39E-02 |
| 65 | GO:0050662: coenzyme binding | 1.49E-02 |
| 66 | GO:0004791: thioredoxin-disulfide reductase activity | 1.49E-02 |
| 67 | GO:0016853: isomerase activity | 1.49E-02 |
| 68 | GO:0003743: translation initiation factor activity | 1.79E-02 |
| 69 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.80E-02 |
| 70 | GO:0016791: phosphatase activity | 1.88E-02 |
| 71 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.95E-02 |
| 72 | GO:0008483: transaminase activity | 1.96E-02 |
| 73 | GO:0016597: amino acid binding | 2.04E-02 |
| 74 | GO:0008168: methyltransferase activity | 2.29E-02 |
| 75 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.48E-02 |
| 76 | GO:0003993: acid phosphatase activity | 3.14E-02 |
| 77 | GO:0043621: protein self-association | 3.86E-02 |
| 78 | GO:0031625: ubiquitin protein ligase binding | 4.84E-02 |
| 79 | GO:0045330: aspartyl esterase activity | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 5.89E-37 |
| 2 | GO:0009534: chloroplast thylakoid | 4.05E-21 |
| 3 | GO:0009941: chloroplast envelope | 2.31E-19 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 2.43E-19 |
| 5 | GO:0009579: thylakoid | 3.80E-14 |
| 6 | GO:0009570: chloroplast stroma | 1.50E-10 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.98E-10 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.82E-09 |
| 9 | GO:0010287: plastoglobule | 4.26E-08 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 7.85E-07 |
| 11 | GO:0031977: thylakoid lumen | 1.95E-06 |
| 12 | GO:0019898: extrinsic component of membrane | 4.21E-06 |
| 13 | GO:0010319: stromule | 8.47E-06 |
| 14 | GO:0030095: chloroplast photosystem II | 1.76E-05 |
| 15 | GO:0009522: photosystem I | 1.00E-04 |
| 16 | GO:0048046: apoplast | 1.18E-04 |
| 17 | GO:0009515: granal stacked thylakoid | 1.67E-04 |
| 18 | GO:0005787: signal peptidase complex | 1.67E-04 |
| 19 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.67E-04 |
| 20 | GO:0031969: chloroplast membrane | 1.85E-04 |
| 21 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.78E-04 |
| 22 | GO:0030076: light-harvesting complex | 5.19E-04 |
| 23 | GO:0009317: acetyl-CoA carboxylase complex | 6.19E-04 |
| 24 | GO:0009517: PSII associated light-harvesting complex II | 1.17E-03 |
| 25 | GO:0009523: photosystem II | 1.42E-03 |
| 26 | GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o) | 1.83E-03 |
| 27 | GO:0009501: amyloplast | 2.99E-03 |
| 28 | GO:0016459: myosin complex | 4.81E-03 |
| 29 | GO:0043234: protein complex | 8.10E-03 |
| 30 | GO:0009706: chloroplast inner membrane | 8.84E-03 |
| 31 | GO:0042651: thylakoid membrane | 9.33E-03 |
| 32 | GO:0005623: cell | 1.14E-02 |
| 33 | GO:0005777: peroxisome | 2.34E-02 |
| 34 | GO:0016021: integral component of membrane | 3.08E-02 |