co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G09470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:2000117: negative regulation of cysteine-type endopeptidase activity	0.00E+00
2	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
3	GO:1904250: positive regulation of age-related resistance	0.00E+00
4	GO:0010398: xylogalacturonan metabolic process	0.00E+00
5	GO:0072722: response to amitrole	0.00E+00
6	GO:0071985: multivesicular body sorting pathway	0.00E+00
7	GO:0006903: vesicle targeting	0.00E+00
8	GO:0090400: stress-induced premature senescence	0.00E+00
9	GO:0080149: sucrose induced translational repression	0.00E+00
10	GO:0046680: response to DDT	0.00E+00
11	GO:0016192: vesicle-mediated transport	2.71E-06
12	GO:0006564: L-serine biosynthetic process	8.98E-05
13	GO:0046686: response to cadmium ion	1.12E-04
14	GO:0006099: tricarboxylic acid cycle	1.50E-04
15	GO:0071669: plant-type cell wall organization or biogenesis	2.33E-04
16	GO:0015031: protein transport	2.33E-04
17	GO:0006886: intracellular protein transport	2.63E-04
18	GO:0042964: thioredoxin reduction	2.94E-04
19	GO:0006680: glucosylceramide catabolic process	2.94E-04
20	GO:1900384: regulation of flavonol biosynthetic process	2.94E-04
21	GO:0006102: isocitrate metabolic process	2.94E-04
22	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.94E-04
23	GO:0000032: cell wall mannoprotein biosynthetic process	2.94E-04
24	GO:0009688: abscisic acid biosynthetic process	6.02E-04
25	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	6.45E-04
26	GO:0009805: coumarin biosynthetic process	6.45E-04
27	GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex	6.45E-04
28	GO:0080026: response to indolebutyric acid	6.45E-04
29	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	7.93E-04
30	GO:0006807: nitrogen compound metabolic process	8.98E-04
31	GO:0055046: microgametogenesis	8.98E-04
32	GO:0010253: UDP-rhamnose biosynthetic process	1.04E-03
33	GO:0044375: regulation of peroxisome size	1.04E-03
34	GO:0072661: protein targeting to plasma membrane	1.04E-03
35	GO:0006517: protein deglycosylation	1.04E-03
36	GO:0010272: response to silver ion	1.04E-03
37	GO:0033591: response to L-ascorbic acid	1.04E-03
38	GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity	1.04E-03
39	GO:0006591: ornithine metabolic process	1.04E-03
40	GO:0009062: fatty acid catabolic process	1.04E-03
41	GO:0006556: S-adenosylmethionine biosynthetic process	1.04E-03
42	GO:0080024: indolebutyric acid metabolic process	1.50E-03
43	GO:0009298: GDP-mannose biosynthetic process	1.50E-03
44	GO:0006612: protein targeting to membrane	1.50E-03
45	GO:0006893: Golgi to plasma membrane transport	1.50E-03
46	GO:0010188: response to microbial phytotoxin	2.01E-03
47	GO:1902584: positive regulation of response to water deprivation	2.01E-03
48	GO:0006621: protein retention in ER lumen	2.01E-03
49	GO:0033356: UDP-L-arabinose metabolic process	2.01E-03
50	GO:0046283: anthocyanin-containing compound metabolic process	2.56E-03
51	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.56E-03
52	GO:0045927: positive regulation of growth	2.56E-03
53	GO:0006662: glycerol ether metabolic process	2.74E-03
54	GO:0009651: response to salt stress	3.04E-03
55	GO:0006014: D-ribose metabolic process	3.16E-03
56	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	3.16E-03
57	GO:0006555: methionine metabolic process	3.16E-03
58	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.16E-03
59	GO:0010315: auxin efflux	3.16E-03
60	GO:0009099: valine biosynthetic process	3.81E-03
61	GO:0009554: megasporogenesis	3.81E-03
62	GO:0080113: regulation of seed growth	3.81E-03
63	GO:0019509: L-methionine salvage from methylthioadenosine	3.81E-03
64	GO:0034389: lipid particle organization	3.81E-03
65	GO:0009082: branched-chain amino acid biosynthetic process	3.81E-03
66	GO:0017148: negative regulation of translation	3.81E-03
67	GO:0030163: protein catabolic process	3.85E-03
68	GO:1902074: response to salt	4.49E-03
69	GO:0080186: developmental vegetative growth	4.49E-03
70	GO:1900057: positive regulation of leaf senescence	4.49E-03
71	GO:0050829: defense response to Gram-negative bacterium	4.49E-03
72	GO:0055114: oxidation-reduction process	4.71E-03
73	GO:0045454: cell redox homeostasis	4.95E-03
74	GO:0006979: response to oxidative stress	4.99E-03
75	GO:0006605: protein targeting	5.21E-03
76	GO:0016559: peroxisome fission	5.21E-03
77	GO:0006491: N-glycan processing	5.21E-03
78	GO:0043068: positive regulation of programmed cell death	5.21E-03
79	GO:0009699: phenylpropanoid biosynthetic process	5.98E-03
80	GO:0006002: fructose 6-phosphate metabolic process	5.98E-03
81	GO:0060321: acceptance of pollen	5.98E-03
82	GO:0019430: removal of superoxide radicals	5.98E-03
83	GO:0010497: plasmodesmata-mediated intercellular transport	5.98E-03
84	GO:0009097: isoleucine biosynthetic process	5.98E-03
85	GO:0009751: response to salicylic acid	6.67E-03
86	GO:0046685: response to arsenic-containing substance	6.77E-03
87	GO:0009407: toxin catabolic process	7.03E-03
88	GO:0010150: leaf senescence	7.15E-03
89	GO:0010043: response to zinc ion	7.37E-03
90	GO:0009098: leucine biosynthetic process	7.60E-03
91	GO:0048354: mucilage biosynthetic process involved in seed coat development	7.60E-03
92	GO:2000280: regulation of root development	7.60E-03
93	GO:0034599: cellular response to oxidative stress	8.45E-03
94	GO:0000103: sulfate assimilation	8.48E-03
95	GO:0006032: chitin catabolic process	8.48E-03
96	GO:0043069: negative regulation of programmed cell death	8.48E-03
97	GO:0051555: flavonol biosynthetic process	8.48E-03
98	GO:0000272: polysaccharide catabolic process	9.38E-03
99	GO:0006887: exocytosis	9.61E-03
100	GO:0016925: protein sumoylation	1.03E-02
101	GO:0006790: sulfur compound metabolic process	1.03E-02
102	GO:0045037: protein import into chloroplast stroma	1.03E-02
103	GO:0009744: response to sucrose	1.04E-02
104	GO:0000209: protein polyubiquitination	1.09E-02
105	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	1.13E-02
106	GO:0010102: lateral root morphogenesis	1.13E-02
107	GO:0009636: response to toxic substance	1.17E-02
108	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.27E-02
109	GO:0009846: pollen germination	1.31E-02
110	GO:0090351: seedling development	1.33E-02
111	GO:0046854: phosphatidylinositol phosphorylation	1.33E-02
112	GO:0007033: vacuole organization	1.33E-02
113	GO:0010053: root epidermal cell differentiation	1.33E-02
114	GO:0009225: nucleotide-sugar metabolic process	1.33E-02
115	GO:0007031: peroxisome organization	1.33E-02
116	GO:0007030: Golgi organization	1.33E-02
117	GO:0019853: L-ascorbic acid biosynthetic process	1.33E-02
118	GO:0000162: tryptophan biosynthetic process	1.44E-02
119	GO:0034976: response to endoplasmic reticulum stress	1.44E-02
120	GO:0006874: cellular calcium ion homeostasis	1.66E-02
121	GO:0016998: cell wall macromolecule catabolic process	1.78E-02
122	GO:0015992: proton transport	1.78E-02
123	GO:0019915: lipid storage	1.78E-02
124	GO:0009620: response to fungus	1.84E-02
125	GO:0030433: ubiquitin-dependent ERAD pathway	1.90E-02
126	GO:0019748: secondary metabolic process	1.90E-02
127	GO:0030245: cellulose catabolic process	1.90E-02
128	GO:0006730: one-carbon metabolic process	1.90E-02
129	GO:0010227: floral organ abscission	2.02E-02
130	GO:0009693: ethylene biosynthetic process	2.02E-02
131	GO:0009306: protein secretion	2.14E-02
132	GO:0009561: megagametogenesis	2.14E-02
133	GO:0042127: regulation of cell proliferation	2.14E-02
134	GO:0042147: retrograde transport, endosome to Golgi	2.27E-02
135	GO:0010118: stomatal movement	2.40E-02
136	GO:0042631: cellular response to water deprivation	2.40E-02
137	GO:0010182: sugar mediated signaling pathway	2.53E-02
138	GO:0045489: pectin biosynthetic process	2.53E-02
139	GO:0006511: ubiquitin-dependent protein catabolic process	2.56E-02
140	GO:0009058: biosynthetic process	2.66E-02
141	GO:0009646: response to absence of light	2.66E-02
142	GO:0006629: lipid metabolic process	2.68E-02
143	GO:0019252: starch biosynthetic process	2.80E-02
144	GO:0009851: auxin biosynthetic process	2.80E-02
145	GO:0006623: protein targeting to vacuole	2.80E-02
146	GO:0006891: intra-Golgi vesicle-mediated transport	2.94E-02
147	GO:0006635: fatty acid beta-oxidation	2.94E-02
148	GO:1901657: glycosyl compound metabolic process	3.22E-02
149	GO:0071281: cellular response to iron ion	3.22E-02
150	GO:0009567: double fertilization forming a zygote and endosperm	3.37E-02
151	GO:0019760: glucosinolate metabolic process	3.37E-02
152	GO:0010252: auxin homeostasis	3.37E-02
153	GO:0006464: cellular protein modification process	3.37E-02
154	GO:0045490: pectin catabolic process	3.48E-02
155	GO:0006904: vesicle docking involved in exocytosis	3.51E-02
156	GO:0009615: response to virus	3.82E-02
157	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.88E-02
158	GO:0010029: regulation of seed germination	3.97E-02
159	GO:0009627: systemic acquired resistance	4.13E-02
160	GO:0006906: vesicle fusion	4.13E-02
161	GO:0010468: regulation of gene expression	4.14E-02
162	GO:0006888: ER to Golgi vesicle-mediated transport	4.29E-02
163	GO:0016049: cell growth	4.44E-02
164	GO:0071555: cell wall organization	4.57E-02
165	GO:0009817: defense response to fungus, incompatible interaction	4.61E-02
166	GO:0030244: cellulose biosynthetic process	4.61E-02
167	GO:0048767: root hair elongation	4.77E-02
168	GO:0009832: plant-type cell wall biogenesis	4.77E-02
169	GO:0006499: N-terminal protein myristoylation	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0005046: KDEL sequence binding	0.00E+00
2	GO:0016504: peptidase activator activity	0.00E+00
3	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0102867: molybdenum cofactor sulfurtransferase activity	0.00E+00
6	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.17E-05
7	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	1.30E-04
8	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	1.30E-04
9	GO:0008320: protein transmembrane transporter activity	2.33E-04
10	GO:0009000: selenocysteine lyase activity	2.94E-04
11	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.94E-04
12	GO:0016229: steroid dehydrogenase activity	2.94E-04
13	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.94E-04
14	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.94E-04
15	GO:0070401: NADP+ binding	2.94E-04
16	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.94E-04
17	GO:0032266: phosphatidylinositol-3-phosphate binding	2.94E-04
18	GO:0048037: cofactor binding	2.94E-04
19	GO:0004476: mannose-6-phosphate isomerase activity	2.94E-04
20	GO:0004348: glucosylceramidase activity	2.94E-04
21	GO:0004791: thioredoxin-disulfide reductase activity	3.12E-04
22	GO:0004776: succinate-CoA ligase (GDP-forming) activity	6.45E-04
23	GO:0052739: phosphatidylserine 1-acylhydrolase activity	6.45E-04
24	GO:0010297: heteropolysaccharide binding	6.45E-04
25	GO:0008460: dTDP-glucose 4,6-dehydratase activity	6.45E-04
26	GO:0052740: 1-acyl-2-lysophosphatidylserine acylhydrolase activity	6.45E-04
27	GO:0004617: phosphoglycerate dehydrogenase activity	6.45E-04
28	GO:0010280: UDP-L-rhamnose synthase activity	6.45E-04
29	GO:0008805: carbon-monoxide oxygenase activity	6.45E-04
30	GO:0004775: succinate-CoA ligase (ADP-forming) activity	6.45E-04
31	GO:1990585: hydroxyproline O-arabinosyltransferase activity	6.45E-04
32	GO:0052691: UDP-arabinopyranose mutase activity	6.45E-04
33	GO:0050377: UDP-glucose 4,6-dehydratase activity	6.45E-04
34	GO:0004478: methionine adenosyltransferase activity	1.04E-03
35	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.04E-03
36	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	1.04E-03
37	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.04E-03
38	GO:0016656: monodehydroascorbate reductase (NADH) activity	1.50E-03
39	GO:0052656: L-isoleucine transaminase activity	1.50E-03
40	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.50E-03
41	GO:0052654: L-leucine transaminase activity	1.50E-03
42	GO:0052655: L-valine transaminase activity	1.50E-03
43	GO:0016866: intramolecular transferase activity	2.01E-03
44	GO:0010279: indole-3-acetic acid amido synthetase activity	2.01E-03
45	GO:0046923: ER retention sequence binding	2.01E-03
46	GO:0004084: branched-chain-amino-acid transaminase activity	2.01E-03
47	GO:0070628: proteasome binding	2.01E-03
48	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	2.01E-03
49	GO:0004031: aldehyde oxidase activity	2.01E-03
50	GO:0050302: indole-3-acetaldehyde oxidase activity	2.01E-03
51	GO:0047134: protein-disulfide reductase activity	2.35E-03
52	GO:0031386: protein tag	2.56E-03
53	GO:0030151: molybdenum ion binding	2.56E-03
54	GO:0008374: O-acyltransferase activity	2.56E-03
55	GO:0035252: UDP-xylosyltransferase activity	3.16E-03
56	GO:0050660: flavin adenine dinucleotide binding	3.39E-03
57	GO:0015035: protein disulfide oxidoreductase activity	3.70E-03
58	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.81E-03
59	GO:0003950: NAD+ ADP-ribosyltransferase activity	3.81E-03
60	GO:0004747: ribokinase activity	3.81E-03
61	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.85E-03
62	GO:0043295: glutathione binding	4.49E-03
63	GO:0003872: 6-phosphofructokinase activity	4.49E-03
64	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.21E-03
65	GO:0052747: sinapyl alcohol dehydrogenase activity	5.21E-03
66	GO:0004033: aldo-keto reductase (NADP) activity	5.21E-03
67	GO:0008865: fructokinase activity	5.21E-03
68	GO:0030170: pyridoxal phosphate binding	5.42E-03
69	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	5.98E-03
70	GO:0004568: chitinase activity	8.48E-03
71	GO:0004364: glutathione transferase activity	1.00E-02
72	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.03E-02
73	GO:0031072: heat shock protein binding	1.13E-02
74	GO:0005198: structural molecule activity	1.17E-02
75	GO:0031624: ubiquitin conjugating enzyme binding	1.23E-02
76	GO:0051287: NAD binding	1.27E-02
77	GO:0016887: ATPase activity	1.32E-02
78	GO:0005217: intracellular ligand-gated ion channel activity	1.33E-02
79	GO:0004970: ionotropic glutamate receptor activity	1.33E-02
80	GO:0008061: chitin binding	1.33E-02
81	GO:0051536: iron-sulfur cluster binding	1.55E-02
82	GO:0043130: ubiquitin binding	1.55E-02
83	GO:0031625: ubiquitin protein ligase binding	1.56E-02
84	GO:0061630: ubiquitin protein ligase activity	1.75E-02
85	GO:0004298: threonine-type endopeptidase activity	1.78E-02
86	GO:0016760: cellulose synthase (UDP-forming) activity	2.02E-02
87	GO:0008810: cellulase activity	2.02E-02
88	GO:0003756: protein disulfide isomerase activity	2.14E-02
89	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.14E-02
90	GO:0008080: N-acetyltransferase activity	2.53E-02
91	GO:0016853: isomerase activity	2.66E-02
92	GO:0004872: receptor activity	2.80E-02
93	GO:0004518: nuclease activity	3.08E-02
94	GO:0008483: transaminase activity	3.51E-02
95	GO:0008237: metallopeptidase activity	3.51E-02
96	GO:0016597: amino acid binding	3.66E-02
97	GO:0051213: dioxygenase activity	3.82E-02
98	GO:0008375: acetylglucosaminyltransferase activity	4.13E-02
99	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.29E-02
100	GO:0102483: scopolin beta-glucosidase activity	4.29E-02
101	GO:0004806: triglyceride lipase activity	4.29E-02
102	GO:0044212: transcription regulatory region DNA binding	4.57E-02
103	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0005794: Golgi apparatus	9.93E-05
2	GO:0005783: endoplasmic reticulum	2.20E-04
3	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.33E-04
4	GO:0000138: Golgi trans cisterna	2.94E-04
5	GO:0045252: oxoglutarate dehydrogenase complex	2.94E-04
6	GO:0000502: proteasome complex	3.52E-04
7	GO:0005829: cytosol	3.72E-04
8	GO:0005789: endoplasmic reticulum membrane	3.92E-04
9	GO:0031901: early endosome membrane	4.36E-04
10	GO:0000814: ESCRT II complex	6.45E-04
11	GO:0030130: clathrin coat of trans-Golgi network vesicle	1.04E-03
12	GO:0030132: clathrin coat of coated pit	1.04E-03
13	GO:0005886: plasma membrane	1.54E-03
14	GO:0005839: proteasome core complex	1.68E-03
15	GO:0005945: 6-phosphofructokinase complex	2.56E-03
16	GO:0030173: integral component of Golgi membrane	3.81E-03
17	GO:0005801: cis-Golgi network	3.81E-03
18	GO:0032580: Golgi cisterna membrane	4.09E-03
19	GO:0031982: vesicle	5.21E-03
20	GO:0005811: lipid particle	5.98E-03
21	GO:0019773: proteasome core complex, alpha-subunit complex	5.98E-03
22	GO:0005779: integral component of peroxisomal membrane	5.98E-03
23	GO:0031090: organelle membrane	6.77E-03
24	GO:0030665: clathrin-coated vesicle membrane	7.60E-03
25	GO:0008540: proteasome regulatory particle, base subcomplex	7.60E-03
26	GO:0017119: Golgi transport complex	8.48E-03
27	GO:0005774: vacuolar membrane	8.61E-03
28	GO:0008541: proteasome regulatory particle, lid subcomplex	9.38E-03
29	GO:0005795: Golgi stack	1.33E-02
30	GO:0005769: early endosome	1.44E-02
31	GO:0005737: cytoplasm	1.83E-02
32	GO:0016021: integral component of membrane	1.87E-02
33	GO:0009506: plasmodesma	2.11E-02
34	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.14E-02
35	GO:0005770: late endosome	2.53E-02
36	GO:0000139: Golgi membrane	2.58E-02
37	GO:0005623: cell	2.59E-02
38	GO:0019898: extrinsic component of membrane	2.80E-02
39	GO:0009504: cell plate	2.80E-02
40	GO:0005618: cell wall	2.85E-02
41	GO:0000145: exocyst	3.08E-02
42	GO:0016592: mediator complex	3.08E-02
43	GO:0071944: cell periphery	3.22E-02
44	GO:0005778: peroxisomal membrane	3.51E-02
45	GO:0005768: endosome	3.93E-02
46	GO:0005788: endoplasmic reticulum lumen	3.97E-02
47	GO:0000151: ubiquitin ligase complex	4.61E-02