co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G08580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090355: positive regulation of auxin metabolic process	0.00E+00
2	GO:0043972: histone H3-K23 acetylation	0.00E+00
3	GO:0090358: positive regulation of tryptophan metabolic process	0.00E+00
4	GO:0044154: histone H3-K14 acetylation	0.00E+00
5	GO:1901698: response to nitrogen compound	0.00E+00
6	GO:2000023: regulation of lateral root development	0.00E+00
7	GO:0043971: histone H3-K18 acetylation	8.25E-05
8	GO:1902025: nitrate import	8.25E-05
9	GO:0010480: microsporocyte differentiation	8.25E-05
10	GO:0090548: response to nitrate starvation	8.25E-05
11	GO:0051171: regulation of nitrogen compound metabolic process	8.25E-05
12	GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic	8.25E-05
13	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	1.97E-04
14	GO:0006013: mannose metabolic process	3.29E-04
15	GO:0071705: nitrogen compound transport	3.29E-04
16	GO:0042780: tRNA 3'-end processing	3.29E-04
17	GO:0045493: xylan catabolic process	3.29E-04
18	GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic	3.29E-04
19	GO:0019748: secondary metabolic process	3.32E-04
20	GO:0010255: glucose mediated signaling pathway	4.75E-04
21	GO:0071249: cellular response to nitrate	6.32E-04
22	GO:0009451: RNA modification	7.88E-04
23	GO:0009616: virus induced gene silencing	8.00E-04
24	GO:0010315: auxin efflux	9.77E-04
25	GO:0035194: posttranscriptional gene silencing by RNA	9.77E-04
26	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	1.16E-03
27	GO:0006401: RNA catabolic process	1.36E-03
28	GO:0009610: response to symbiotic fungus	1.36E-03
29	GO:0048437: floral organ development	1.36E-03
30	GO:0006353: DNA-templated transcription, termination	1.57E-03
31	GO:0034968: histone lysine methylation	1.57E-03
32	GO:0044030: regulation of DNA methylation	1.79E-03
33	GO:0010380: regulation of chlorophyll biosynthetic process	2.26E-03
34	GO:0016571: histone methylation	2.26E-03
35	GO:1903507: negative regulation of nucleic acid-templated transcription	2.77E-03
36	GO:0048229: gametophyte development	2.77E-03
37	GO:0016485: protein processing	2.77E-03
38	GO:0009793: embryo development ending in seed dormancy	2.93E-03
39	GO:0015706: nitrate transport	3.03E-03
40	GO:0010075: regulation of meristem growth	3.31E-03
41	GO:0009934: regulation of meristem structural organization	3.59E-03
42	GO:0080188: RNA-directed DNA methylation	3.88E-03
43	GO:0010167: response to nitrate	3.88E-03
44	GO:0009833: plant-type primary cell wall biogenesis	4.18E-03
45	GO:0000162: tryptophan biosynthetic process	4.18E-03
46	GO:0006338: chromatin remodeling	4.48E-03
47	GO:0010187: negative regulation of seed germination	4.48E-03
48	GO:0043622: cortical microtubule organization	4.80E-03
49	GO:0010073: meristem maintenance	4.80E-03
50	GO:0016226: iron-sulfur cluster assembly	5.45E-03
51	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.45E-03
52	GO:0042127: regulation of cell proliferation	6.13E-03
53	GO:0010051: xylem and phloem pattern formation	6.83E-03
54	GO:0048653: anther development	6.83E-03
55	GO:0048868: pollen tube development	7.20E-03
56	GO:0009851: auxin biosynthetic process	7.95E-03
57	GO:0002229: defense response to oomycetes	8.33E-03
58	GO:0080156: mitochondrial mRNA modification	8.33E-03
59	GO:0010583: response to cyclopentenone	8.73E-03
60	GO:0009658: chloroplast organization	9.05E-03
61	GO:0048366: leaf development	1.07E-02
62	GO:0016126: sterol biosynthetic process	1.08E-02
63	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.12E-02
64	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.16E-02
65	GO:0010411: xyloglucan metabolic process	1.21E-02
66	GO:0016049: cell growth	1.26E-02
67	GO:0030244: cellulose biosynthetic process	1.30E-02
68	GO:0010311: lateral root formation	1.35E-02
69	GO:0009832: plant-type cell wall biogenesis	1.35E-02
70	GO:0009834: plant-type secondary cell wall biogenesis	1.39E-02
71	GO:0071555: cell wall organization	1.42E-02
72	GO:0048527: lateral root development	1.44E-02
73	GO:0009910: negative regulation of flower development	1.44E-02
74	GO:0006508: proteolysis	1.72E-02
75	GO:0008152: metabolic process	1.83E-02
76	GO:0008283: cell proliferation	1.84E-02
77	GO:0031347: regulation of defense response	2.11E-02
78	GO:0006364: rRNA processing	2.28E-02
79	GO:0009736: cytokinin-activated signaling pathway	2.28E-02
80	GO:0009734: auxin-activated signaling pathway	2.34E-02
81	GO:0006468: protein phosphorylation	2.36E-02
82	GO:0016569: covalent chromatin modification	2.80E-02
83	GO:0009740: gibberellic acid mediated signaling pathway	2.80E-02
84	GO:0009553: embryo sac development	2.86E-02
85	GO:0051726: regulation of cell cycle	3.05E-02
86	GO:0042744: hydrogen peroxide catabolic process	3.76E-02
87	GO:0009790: embryo development	3.83E-02
88	GO:0006633: fatty acid biosynthetic process	4.04E-02
89	GO:0040008: regulation of growth	4.18E-02
90	GO:0007623: circadian rhythm	4.32E-02
91	GO:0009739: response to gibberellin	4.67E-02
92	GO:0007166: cell surface receptor signaling pathway	4.75E-02
93	GO:0010468: regulation of gene expression	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0017046: peptide hormone binding	0.00E+00
2	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
3	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
4	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
5	GO:0008859: exoribonuclease II activity	0.00E+00
6	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	8.25E-05
7	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	8.25E-05
8	GO:0004047: aminomethyltransferase activity	1.97E-04
9	GO:0042781: 3'-tRNA processing endoribonuclease activity	3.29E-04
10	GO:0016805: dipeptidase activity	3.29E-04
11	GO:0010429: methyl-CpNpN binding	3.29E-04
12	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	3.29E-04
13	GO:0010428: methyl-CpNpG binding	3.29E-04
14	GO:0022857: transmembrane transporter activity	3.55E-04
15	GO:0000254: C-4 methylsterol oxidase activity	4.75E-04
16	GO:0004519: endonuclease activity	5.20E-04
17	GO:0009044: xylan 1,4-beta-xylosidase activity	6.32E-04
18	GO:0042277: peptide binding	6.32E-04
19	GO:0046556: alpha-L-arabinofuranosidase activity	6.32E-04
20	GO:0010385: double-stranded methylated DNA binding	6.32E-04
21	GO:0008237: metallopeptidase activity	7.76E-04
22	GO:0004559: alpha-mannosidase activity	1.16E-03
23	GO:0042393: histone binding	1.59E-03
24	GO:0030246: carbohydrate binding	1.70E-03
25	GO:0004185: serine-type carboxypeptidase activity	1.79E-03
26	GO:0003724: RNA helicase activity	1.79E-03
27	GO:0003678: DNA helicase activity	2.02E-03
28	GO:0015020: glucuronosyltransferase activity	2.51E-03
29	GO:0008327: methyl-CpG binding	2.77E-03
30	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.92E-03
31	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.11E-03
32	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.11E-03
33	GO:0000175: 3'-5'-exoribonuclease activity	3.31E-03
34	GO:0003714: transcription corepressor activity	4.48E-03
35	GO:0033612: receptor serine/threonine kinase binding	5.12E-03
36	GO:0004540: ribonuclease activity	5.12E-03
37	GO:0016760: cellulose synthase (UDP-forming) activity	5.78E-03
38	GO:0018024: histone-lysine N-methyltransferase activity	6.48E-03
39	GO:0008194: UDP-glycosyltransferase activity	6.54E-03
40	GO:0004402: histone acetyltransferase activity	6.83E-03
41	GO:0001085: RNA polymerase II transcription factor binding	7.20E-03
42	GO:0019901: protein kinase binding	7.95E-03
43	GO:0003723: RNA binding	8.06E-03
44	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	8.24E-03
45	GO:0016759: cellulose synthase activity	9.53E-03
46	GO:0004674: protein serine/threonine kinase activity	1.09E-02
47	GO:0004806: triglyceride lipase activity	1.21E-02
48	GO:0016301: kinase activity	1.34E-02
49	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.39E-02
50	GO:0004222: metalloendopeptidase activity	1.39E-02
51	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	1.44E-02
52	GO:0003824: catalytic activity	1.60E-02
53	GO:0043621: protein self-association	1.95E-02
54	GO:0004386: helicase activity	3.11E-02
55	GO:0016758: transferase activity, transferring hexosyl groups	3.37E-02
56	GO:0019843: rRNA binding	3.43E-02
57	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	3.76E-02
58	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.11E-02
59	GO:0005524: ATP binding	4.38E-02

Rank	GO Term	Adjusted P value
1	GO:0009505: plant-type cell wall	3.04E-05
2	GO:0010330: cellulose synthase complex	3.29E-04
3	GO:0000178: exosome (RNase complex)	8.00E-04
4	GO:0010005: cortical microtubule, transverse to long axis	1.16E-03
5	GO:0043231: intracellular membrane-bounded organelle	3.17E-03
6	GO:0016602: CCAAT-binding factor complex	3.31E-03
7	GO:0000775: chromosome, centromeric region	5.45E-03
8	GO:0000932: P-body	1.08E-02
9	GO:0005667: transcription factor complex	1.17E-02
10	GO:0009707: chloroplast outer membrane	1.30E-02
11	GO:0048046: apoplast	2.21E-02
12	GO:0005886: plasma membrane	2.96E-02
13	GO:0009507: chloroplast	3.23E-02
14	GO:0005759: mitochondrial matrix	4.04E-02
15	GO:0009705: plant-type vacuole membrane	4.32E-02
16	GO:0005802: trans-Golgi network	4.71E-02