Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G07590

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0000372: Group I intron splicing0.00E+00
2GO:0080127: fruit septum development0.00E+00
3GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
4GO:0032212: positive regulation of telomere maintenance via telomerase0.00E+00
5GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
6GO:0070921: regulation of production of siRNA involved in chromatin silencing by small RNA0.00E+00
7GO:0032206: positive regulation of telomere maintenance0.00E+00
8GO:0046486: glycerolipid metabolic process0.00E+00
9GO:0006907: pinocytosis0.00E+00
10GO:0070125: mitochondrial translational elongation0.00E+00
11GO:0010081: regulation of inflorescence meristem growth0.00E+00
12GO:0045014: negative regulation of transcription by glucose0.00E+00
13GO:0045176: apical protein localization0.00E+00
14GO:0000373: Group II intron splicing7.91E-06
15GO:0009926: auxin polar transport9.56E-05
16GO:0046620: regulation of organ growth1.03E-04
17GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.17E-04
18GO:0009734: auxin-activated signaling pathway2.75E-04
19GO:0009733: response to auxin3.40E-04
20GO:0010582: floral meristem determinacy4.37E-04
21GO:0010583: response to cyclopentenone5.30E-04
22GO:0006438: valyl-tRNA aminoacylation8.71E-04
23GO:0010080: regulation of floral meristem growth8.71E-04
24GO:0043087: regulation of GTPase activity8.71E-04
25GO:0043609: regulation of carbon utilization8.71E-04
26GO:0006436: tryptophanyl-tRNA aminoacylation8.71E-04
27GO:0000066: mitochondrial ornithine transport8.71E-04
28GO:0051013: microtubule severing8.71E-04
29GO:0034757: negative regulation of iron ion transport8.71E-04
30GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic8.71E-04
31GO:0009451: RNA modification1.35E-03
32GO:0061062: regulation of nematode larval development1.89E-03
33GO:0010271: regulation of chlorophyll catabolic process1.89E-03
34GO:0006650: glycerophospholipid metabolic process1.89E-03
35GO:0001736: establishment of planar polarity1.89E-03
36GO:0080009: mRNA methylation1.89E-03
37GO:0009786: regulation of asymmetric cell division1.89E-03
38GO:0010024: phytochromobilin biosynthetic process1.89E-03
39GO:0043039: tRNA aminoacylation1.89E-03
40GO:0048255: mRNA stabilization1.89E-03
41GO:0009958: positive gravitropism2.26E-03
42GO:0006782: protoporphyrinogen IX biosynthetic process2.96E-03
43GO:0048829: root cap development2.96E-03
44GO:0010226: response to lithium ion3.13E-03
45GO:0016045: detection of bacterium3.13E-03
46GO:0010022: meristem determinacy3.13E-03
47GO:0042780: tRNA 3'-end processing3.13E-03
48GO:0030029: actin filament-based process3.13E-03
49GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic3.13E-03
50GO:0045910: negative regulation of DNA recombination3.13E-03
51GO:0080117: secondary growth3.13E-03
52GO:0006000: fructose metabolic process3.13E-03
53GO:0046168: glycerol-3-phosphate catabolic process3.13E-03
54GO:0009793: embryo development ending in seed dormancy3.78E-03
55GO:0005983: starch catabolic process3.93E-03
56GO:0045037: protein import into chloroplast stroma3.93E-03
57GO:0006424: glutamyl-tRNA aminoacylation4.57E-03
58GO:2000904: regulation of starch metabolic process4.57E-03
59GO:0045017: glycerolipid biosynthetic process4.57E-03
60GO:0010371: regulation of gibberellin biosynthetic process4.57E-03
61GO:0051513: regulation of monopolar cell growth4.57E-03
62GO:0051639: actin filament network formation4.57E-03
63GO:0034059: response to anoxia4.57E-03
64GO:0010239: chloroplast mRNA processing4.57E-03
65GO:0044211: CTP salvage4.57E-03
66GO:0007276: gamete generation4.57E-03
67GO:0009800: cinnamic acid biosynthetic process4.57E-03
68GO:0006072: glycerol-3-phosphate metabolic process4.57E-03
69GO:0010540: basipetal auxin transport5.07E-03
70GO:0009825: multidimensional cell growth5.69E-03
71GO:0006021: inositol biosynthetic process6.18E-03
72GO:0008295: spermidine biosynthetic process6.18E-03
73GO:0044206: UMP salvage6.18E-03
74GO:0009956: radial pattern formation6.18E-03
75GO:0051764: actin crosslink formation6.18E-03
76GO:0051017: actin filament bundle assembly7.07E-03
77GO:0010311: lateral root formation7.17E-03
78GO:0006418: tRNA aminoacylation for protein translation7.81E-03
79GO:0009696: salicylic acid metabolic process7.97E-03
80GO:0048497: maintenance of floral organ identity7.97E-03
81GO:0009107: lipoate biosynthetic process7.97E-03
82GO:0016123: xanthophyll biosynthetic process7.97E-03
83GO:0010158: abaxial cell fate specification7.97E-03
84GO:0080110: sporopollenin biosynthetic process7.97E-03
85GO:0006468: protein phosphorylation8.04E-03
86GO:0009920: cell plate formation involved in plant-type cell wall biogenesis9.92E-03
87GO:0006086: acetyl-CoA biosynthetic process from pyruvate9.92E-03
88GO:0003006: developmental process involved in reproduction9.92E-03
89GO:0006559: L-phenylalanine catabolic process9.92E-03
90GO:0006206: pyrimidine nucleobase metabolic process9.92E-03
91GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione9.92E-03
92GO:0048827: phyllome development9.92E-03
93GO:0009913: epidermal cell differentiation9.92E-03
94GO:0016554: cytidine to uridine editing9.92E-03
95GO:0048831: regulation of shoot system development9.92E-03
96GO:0009658: chloroplast organization1.03E-02
97GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.03E-02
98GO:0006839: mitochondrial transport1.08E-02
99GO:0030001: metal ion transport1.08E-02
100GO:0042127: regulation of cell proliferation1.12E-02
101GO:0009942: longitudinal axis specification1.20E-02
102GO:0048509: regulation of meristem development1.20E-02
103GO:0010019: chloroplast-nucleus signaling pathway1.20E-02
104GO:0048444: floral organ morphogenesis1.20E-02
105GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity1.20E-02
106GO:0010444: guard mother cell differentiation1.43E-02
107GO:0000082: G1/S transition of mitotic cell cycle1.43E-02
108GO:0015693: magnesium ion transport1.43E-02
109GO:0009610: response to symbiotic fungus1.43E-02
110GO:0006955: immune response1.43E-02
111GO:1900056: negative regulation of leaf senescence1.43E-02
112GO:0010050: vegetative phase change1.43E-02
113GO:0010098: suspensor development1.43E-02
114GO:0007018: microtubule-based movement1.54E-02
115GO:0040008: regulation of growth1.59E-02
116GO:0048825: cotyledon development1.65E-02
117GO:0009850: auxin metabolic process1.66E-02
118GO:0006353: DNA-templated transcription, termination1.66E-02
119GO:0010492: maintenance of shoot apical meristem identity1.66E-02
120GO:0000105: histidine biosynthetic process1.66E-02
121GO:0009231: riboflavin biosynthetic process1.66E-02
122GO:0071554: cell wall organization or biogenesis1.77E-02
123GO:0009657: plastid organization1.92E-02
124GO:0048574: long-day photoperiodism, flowering1.92E-02
125GO:0032544: plastid translation1.92E-02
126GO:0007389: pattern specification process1.92E-02
127GO:0009932: cell tip growth1.92E-02
128GO:0006002: fructose 6-phosphate metabolic process1.92E-02
129GO:0071482: cellular response to light stimulus1.92E-02
130GO:0007186: G-protein coupled receptor signaling pathway1.92E-02
131GO:0045892: negative regulation of transcription, DNA-templated2.10E-02
132GO:0009828: plant-type cell wall loosening2.15E-02
133GO:0046916: cellular transition metal ion homeostasis2.18E-02
134GO:0048507: meristem development2.18E-02
135GO:0048589: developmental growth2.18E-02
136GO:0009056: catabolic process2.18E-02
137GO:0006098: pentose-phosphate shunt2.18E-02
138GO:0071555: cell wall organization2.24E-02
139GO:0048316: seed development2.39E-02
140GO:0008202: steroid metabolic process2.46E-02
141GO:0016573: histone acetylation2.46E-02
142GO:0005982: starch metabolic process2.46E-02
143GO:0006779: porphyrin-containing compound biosynthetic process2.46E-02
144GO:0000723: telomere maintenance2.46E-02
145GO:0042761: very long-chain fatty acid biosynthetic process2.46E-02
146GO:1900865: chloroplast RNA modification2.46E-02
147GO:0016571: histone methylation2.46E-02
148GO:0006535: cysteine biosynthetic process from serine2.74E-02
149GO:0019538: protein metabolic process2.74E-02
150GO:0009641: shade avoidance2.74E-02
151GO:0006298: mismatch repair2.74E-02
152GO:0006949: syncytium formation2.74E-02
153GO:0010192: mucilage biosynthetic process2.74E-02
154GO:0031627: telomeric loop formation2.74E-02
155GO:0009627: systemic acquired resistance2.87E-02
156GO:0009624: response to nematode2.89E-02
157GO:0010411: xyloglucan metabolic process3.02E-02
158GO:0015995: chlorophyll biosynthetic process3.02E-02
159GO:0008285: negative regulation of cell proliferation3.04E-02
160GO:0009750: response to fructose3.04E-02
161GO:0016485: protein processing3.04E-02
162GO:0048765: root hair cell differentiation3.04E-02
163GO:0009416: response to light stimulus3.05E-02
164GO:0010152: pollen maturation3.35E-02
165GO:0006790: sulfur compound metabolic process3.35E-02
166GO:0048481: plant ovule development3.35E-02
167GO:0009832: plant-type cell wall biogenesis3.52E-02
168GO:0000160: phosphorelay signal transduction system3.52E-02
169GO:0010102: lateral root morphogenesis3.67E-02
170GO:0009691: cytokinin biosynthetic process3.67E-02
171GO:0010229: inflorescence development3.67E-02
172GO:0006094: gluconeogenesis3.67E-02
173GO:0030048: actin filament-based movement3.67E-02
174GO:0010020: chloroplast fission4.00E-02
175GO:0009933: meristem structural organization4.00E-02
176GO:0009887: animal organ morphogenesis4.00E-02
177GO:0009266: response to temperature stimulus4.00E-02
178GO:0009934: regulation of meristem structural organization4.00E-02
179GO:0048467: gynoecium development4.00E-02
180GO:0010207: photosystem II assembly4.00E-02
181GO:0006865: amino acid transport4.05E-02
182GO:0080188: RNA-directed DNA methylation4.34E-02
183GO:0046854: phosphatidylinositol phosphorylation4.34E-02
184GO:0010053: root epidermal cell differentiation4.34E-02
185GO:0006863: purine nucleobase transport4.69E-02
186GO:0009833: plant-type primary cell wall biogenesis4.69E-02
187GO:0010025: wax biosynthetic process4.69E-02
RankGO TermAdjusted P value
1GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
2GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
3GO:0004401: histidinol-phosphatase activity0.00E+00
4GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity0.00E+00
5GO:0016636: oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor0.00E+00
6GO:0047793: cycloeucalenol cycloisomerase activity0.00E+00
7GO:0000906: 6,7-dimethyl-8-ribityllumazine synthase activity0.00E+00
8GO:0052834: inositol monophosphate phosphatase activity0.00E+00
9GO:0050619: phytochromobilin:ferredoxin oxidoreductase activity0.00E+00
10GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
11GO:0008805: carbon-monoxide oxygenase activity3.15E-05
12GO:0003723: RNA binding5.68E-05
13GO:0001872: (1->3)-beta-D-glucan binding2.03E-04
14GO:0010011: auxin binding3.36E-04
15GO:0019203: carbohydrate phosphatase activity8.71E-04
16GO:0005290: L-histidine transmembrane transporter activity8.71E-04
17GO:0004832: valine-tRNA ligase activity8.71E-04
18GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity8.71E-04
19GO:0052381: tRNA dimethylallyltransferase activity8.71E-04
20GO:0004830: tryptophan-tRNA ligase activity8.71E-04
21GO:0010347: L-galactose-1-phosphate phosphatase activity8.71E-04
22GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity8.71E-04
23GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity8.71E-04
24GO:0005227: calcium activated cation channel activity8.71E-04
25GO:0042834: peptidoglycan binding8.71E-04
26GO:0004818: glutamate-tRNA ligase activity8.71E-04
27GO:0008568: microtubule-severing ATPase activity8.71E-04
28GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity8.71E-04
29GO:0005096: GTPase activator activity1.38E-03
30GO:0030570: pectate lyase activity1.50E-03
31GO:0008934: inositol monophosphate 1-phosphatase activity1.89E-03
32GO:0019156: isoamylase activity1.89E-03
33GO:0052833: inositol monophosphate 4-phosphatase activity1.89E-03
34GO:0000064: L-ornithine transmembrane transporter activity1.89E-03
35GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.89E-03
36GO:0050736: O-malonyltransferase activity1.89E-03
37GO:0009884: cytokinin receptor activity1.89E-03
38GO:0050017: L-3-cyanoalanine synthase activity1.89E-03
39GO:0017118: lipoyltransferase activity1.89E-03
40GO:0005094: Rho GDP-dissociation inhibitor activity1.89E-03
41GO:0010296: prenylcysteine methylesterase activity1.89E-03
42GO:0016415: octanoyltransferase activity1.89E-03
43GO:0004047: aminomethyltransferase activity1.89E-03
44GO:0004766: spermidine synthase activity1.89E-03
45GO:0052832: inositol monophosphate 3-phosphatase activity1.89E-03
46GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.89E-03
47GO:0004109: coproporphyrinogen oxidase activity1.89E-03
48GO:0042781: 3'-tRNA processing endoribonuclease activity3.13E-03
49GO:0004148: dihydrolipoyl dehydrogenase activity3.13E-03
50GO:0005034: osmosensor activity3.13E-03
51GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity3.13E-03
52GO:0016707: gibberellin 3-beta-dioxygenase activity3.13E-03
53GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity3.13E-03
54GO:0045548: phenylalanine ammonia-lyase activity3.13E-03
55GO:0003913: DNA photolyase activity3.13E-03
56GO:0004519: endonuclease activity4.09E-03
57GO:0009982: pseudouridine synthase activity4.48E-03
58GO:0015181: arginine transmembrane transporter activity4.57E-03
59GO:0080031: methyl salicylate esterase activity4.57E-03
60GO:0015189: L-lysine transmembrane transporter activity4.57E-03
61GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity4.57E-03
62GO:0043047: single-stranded telomeric DNA binding4.57E-03
63GO:0004672: protein kinase activity4.81E-03
64GO:0030247: polysaccharide binding5.89E-03
65GO:0019199: transmembrane receptor protein kinase activity6.18E-03
66GO:0004845: uracil phosphoribosyltransferase activity6.18E-03
67GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed6.18E-03
68GO:0010328: auxin influx transmembrane transporter activity6.18E-03
69GO:0070628: proteasome binding6.18E-03
70GO:0004871: signal transducer activity7.41E-03
71GO:0043424: protein histidine kinase binding7.81E-03
72GO:0005471: ATP:ADP antiporter activity7.97E-03
73GO:0008725: DNA-3-methyladenine glycosylase activity7.97E-03
74GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds8.40E-03
75GO:0004556: alpha-amylase activity9.92E-03
76GO:0004462: lactoylglutathione lyase activity9.92E-03
77GO:2001070: starch binding9.92E-03
78GO:0030983: mismatched DNA binding9.92E-03
79GO:0080030: methyl indole-3-acetate esterase activity9.92E-03
80GO:0004332: fructose-bisphosphate aldolase activity9.92E-03
81GO:0004709: MAP kinase kinase kinase activity9.92E-03
82GO:0031593: polyubiquitin binding9.92E-03
83GO:0004674: protein serine/threonine kinase activity1.08E-02
84GO:0016301: kinase activity1.08E-02
85GO:0005524: ATP binding1.18E-02
86GO:0016832: aldehyde-lyase activity1.20E-02
87GO:0004656: procollagen-proline 4-dioxygenase activity1.20E-02
88GO:0019900: kinase binding1.20E-02
89GO:0004124: cysteine synthase activity1.20E-02
90GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.20E-02
91GO:0004849: uridine kinase activity1.20E-02
92GO:0004812: aminoacyl-tRNA ligase activity1.22E-02
93GO:0042162: telomeric DNA binding1.43E-02
94GO:0009881: photoreceptor activity1.43E-02
95GO:0019901: protein kinase binding1.65E-02
96GO:0016762: xyloglucan:xyloglucosyl transferase activity1.77E-02
97GO:0008142: oxysterol binding1.92E-02
98GO:0046914: transition metal ion binding1.92E-02
99GO:0051015: actin filament binding2.01E-02
100GO:0016759: cellulose synthase activity2.15E-02
101GO:0003684: damaged DNA binding2.15E-02
102GO:0008138: protein tyrosine/serine/threonine phosphatase activity2.18E-02
103GO:0042803: protein homodimerization activity2.21E-02
104GO:0005200: structural constituent of cytoskeleton2.28E-02
105GO:0016413: O-acetyltransferase activity2.42E-02
106GO:0009672: auxin:proton symporter activity2.46E-02
107GO:0004673: protein histidine kinase activity2.74E-02
108GO:0003779: actin binding2.79E-02
109GO:0016798: hydrolase activity, acting on glycosyl bonds3.02E-02
110GO:0003691: double-stranded telomeric DNA binding3.04E-02
111GO:0000049: tRNA binding3.35E-02
112GO:0016788: hydrolase activity, acting on ester bonds3.36E-02
113GO:0010329: auxin efflux transmembrane transporter activity3.67E-02
114GO:0015266: protein channel activity3.67E-02
115GO:0015095: magnesium ion transmembrane transporter activity3.67E-02
116GO:0000155: phosphorelay sensor kinase activity3.67E-02
117GO:0003725: double-stranded RNA binding3.67E-02
118GO:0004222: metalloendopeptidase activity3.69E-02
119GO:0050897: cobalt ion binding3.87E-02
120GO:0042973: glucan endo-1,3-beta-D-glucosidase activity4.00E-02
121GO:0003774: motor activity4.00E-02
122GO:0016829: lyase activity4.22E-02
123GO:0005515: protein binding4.29E-02
124GO:0008061: chitin binding4.34E-02
125GO:0003712: transcription cofactor activity4.34E-02
126GO:0016740: transferase activity4.38E-02
127GO:0004712: protein serine/threonine/tyrosine kinase activity4.62E-02
128GO:0102337: 3-oxo-cerotoyl-CoA synthase activity4.69E-02
129GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity4.69E-02
130GO:0102336: 3-oxo-arachidoyl-CoA synthase activity4.69E-02
RankGO TermAdjusted P value
1GO:0000408: EKC/KEOPS complex0.00E+00
2GO:0009537: proplastid0.00E+00
3GO:0009349: riboflavin synthase complex0.00E+00
4GO:0043224: nuclear SCF ubiquitin ligase complex0.00E+00
5GO:0035452: extrinsic component of plastid membrane0.00E+00
6GO:0009507: chloroplast2.62E-06
7GO:0009570: chloroplast stroma5.53E-04
8GO:0009986: cell surface1.16E-03
9GO:0005886: plasma membrane1.26E-03
10GO:0009569: chloroplast starch grain1.89E-03
11GO:0005697: telomerase holoenzyme complex1.89E-03
12GO:0009513: etioplast1.89E-03
13GO:0046658: anchored component of plasma membrane2.26E-03
14GO:0009509: chromoplast3.13E-03
15GO:0030139: endocytic vesicle3.13E-03
16GO:0009331: glycerol-3-phosphate dehydrogenase complex4.57E-03
17GO:0032585: multivesicular body membrane4.57E-03
18GO:0032432: actin filament bundle4.57E-03
19GO:0009532: plastid stroma8.61E-03
20GO:0009941: chloroplast envelope9.22E-03
21GO:0015629: actin cytoskeleton1.03E-02
22GO:0005871: kinesin complex1.22E-02
23GO:0031225: anchored component of membrane1.24E-02
24GO:0031305: integral component of mitochondrial inner membrane1.66E-02
25GO:0009501: amyloplast1.66E-02
26GO:0000784: nuclear chromosome, telomeric region1.92E-02
27GO:0000783: nuclear telomere cap complex1.92E-02
28GO:0030529: intracellular ribonucleoprotein complex2.57E-02
29GO:0016459: myosin complex2.74E-02
30GO:0005884: actin filament3.04E-02
31GO:0009707: chloroplast outer membrane3.35E-02
32GO:0009574: preprophase band3.67E-02
33GO:0016602: CCAAT-binding factor complex3.67E-02
34GO:0005578: proteinaceous extracellular matrix3.67E-02
35GO:0030095: chloroplast photosystem II4.00E-02
36GO:0005874: microtubule4.26E-02
37GO:0000419: DNA-directed RNA polymerase V complex4.69E-02
38GO:0005875: microtubule associated complex4.69E-02
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Gene type



Gene DE type