co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G06700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0046460: neutral lipid biosynthetic process	0.00E+00
3	GO:0000372: Group I intron splicing	0.00E+00
4	GO:0043972: histone H3-K23 acetylation	0.00E+00
5	GO:0033528: S-methylmethionine cycle	0.00E+00
6	GO:0043457: regulation of cellular respiration	0.00E+00
7	GO:0044154: histone H3-K14 acetylation	0.00E+00
8	GO:1902025: nitrate import	2.55E-04
9	GO:0000012: single strand break repair	2.55E-04
10	GO:0006436: tryptophanyl-tRNA aminoacylation	2.55E-04
11	GO:0090548: response to nitrate starvation	2.55E-04
12	GO:0000066: mitochondrial ornithine transport	2.55E-04
13	GO:0034757: negative regulation of iron ion transport	2.55E-04
14	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	2.55E-04
15	GO:0043971: histone H3-K18 acetylation	2.55E-04
16	GO:0000373: Group II intron splicing	3.55E-04
17	GO:0006435: threonyl-tRNA aminoacylation	5.64E-04
18	GO:0080005: photosystem stoichiometry adjustment	5.64E-04
19	GO:0010271: regulation of chlorophyll catabolic process	5.64E-04
20	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	5.64E-04
21	GO:0080117: secondary growth	9.15E-04
22	GO:0045493: xylan catabolic process	9.15E-04
23	GO:0030029: actin filament-based process	9.15E-04
24	GO:0031022: nuclear migration along microfilament	9.15E-04
25	GO:0009451: RNA modification	1.06E-03
26	GO:0009800: cinnamic acid biosynthetic process	1.31E-03
27	GO:0010306: rhamnogalacturonan II biosynthetic process	1.31E-03
28	GO:2000904: regulation of starch metabolic process	1.31E-03
29	GO:0009102: biotin biosynthetic process	1.31E-03
30	GO:0051639: actin filament network formation	1.31E-03
31	GO:0010239: chloroplast mRNA processing	1.31E-03
32	GO:0044211: CTP salvage	1.31E-03
33	GO:0015846: polyamine transport	1.75E-03
34	GO:0051764: actin crosslink formation	1.75E-03
35	GO:0051322: anaphase	1.75E-03
36	GO:0044206: UMP salvage	1.75E-03
37	GO:0009904: chloroplast accumulation movement	2.23E-03
38	GO:0031365: N-terminal protein amino acid modification	2.23E-03
39	GO:0010158: abaxial cell fate specification	2.23E-03
40	GO:0006465: signal peptide processing	2.23E-03
41	GO:0048868: pollen tube development	2.24E-03
42	GO:0046323: glucose import	2.24E-03
43	GO:0048831: regulation of shoot system development	2.75E-03
44	GO:0048827: phyllome development	2.75E-03
45	GO:0006559: L-phenylalanine catabolic process	2.75E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	2.75E-03
47	GO:0007264: small GTPase mediated signal transduction	2.94E-03
48	GO:0048509: regulation of meristem development	3.30E-03
49	GO:0009903: chloroplast avoidance movement	3.30E-03
50	GO:0034389: lipid particle organization	3.30E-03
51	GO:0009610: response to symbiotic fungus	3.89E-03
52	GO:0010050: vegetative phase change	3.89E-03
53	GO:0010029: regulation of seed germination	4.20E-03
54	GO:0006353: DNA-templated transcription, termination	4.52E-03
55	GO:0070413: trehalose metabolism in response to stress	4.52E-03
56	GO:0009850: auxin metabolic process	4.52E-03
57	GO:0032508: DNA duplex unwinding	4.52E-03
58	GO:0045010: actin nucleation	4.52E-03
59	GO:0032544: plastid translation	5.18E-03
60	GO:0044030: regulation of DNA methylation	5.18E-03
61	GO:0071482: cellular response to light stimulus	5.18E-03
62	GO:0000160: phosphorelay signal transduction system	5.44E-03
63	GO:0019432: triglyceride biosynthetic process	5.86E-03
64	GO:0016571: histone methylation	6.58E-03
65	GO:0008202: steroid metabolic process	6.58E-03
66	GO:0016573: histone acetylation	6.58E-03
67	GO:0010018: far-red light signaling pathway	6.58E-03
68	GO:0009086: methionine biosynthetic process	6.58E-03
69	GO:0006535: cysteine biosynthetic process from serine	7.33E-03
70	GO:0006259: DNA metabolic process	7.33E-03
71	GO:0006265: DNA topological change	8.11E-03
72	GO:0010582: floral meristem determinacy	8.92E-03
73	GO:0009636: response to toxic substance	9.53E-03
74	GO:0010229: inflorescence development	9.75E-03
75	GO:0030036: actin cytoskeleton organization	9.75E-03
76	GO:0009767: photosynthetic electron transport chain	9.75E-03
77	GO:0006970: response to osmotic stress	1.05E-02
78	GO:0010207: photosystem II assembly	1.06E-02
79	GO:0010540: basipetal auxin transport	1.06E-02
80	GO:0009266: response to temperature stimulus	1.06E-02
81	GO:0006302: double-strand break repair	1.06E-02
82	GO:0009736: cytokinin-activated signaling pathway	1.14E-02
83	GO:0006364: rRNA processing	1.14E-02
84	GO:0080188: RNA-directed DNA methylation	1.15E-02
85	GO:0042753: positive regulation of circadian rhythm	1.24E-02
86	GO:0006863: purine nucleobase transport	1.24E-02
87	GO:0006071: glycerol metabolic process	1.24E-02
88	GO:0051017: actin filament bundle assembly	1.34E-02
89	GO:0006289: nucleotide-excision repair	1.34E-02
90	GO:0005992: trehalose biosynthetic process	1.34E-02
91	GO:0019344: cysteine biosynthetic process	1.34E-02
92	GO:0030150: protein import into mitochondrial matrix	1.34E-02
93	GO:0006338: chromatin remodeling	1.34E-02
94	GO:0046777: protein autophosphorylation	1.37E-02
95	GO:0010073: meristem maintenance	1.43E-02
96	GO:0006825: copper ion transport	1.43E-02
97	GO:0006418: tRNA aminoacylation for protein translation	1.43E-02
98	GO:0015992: proton transport	1.53E-02
99	GO:0009269: response to desiccation	1.53E-02
100	GO:0016226: iron-sulfur cluster assembly	1.64E-02
101	GO:0035428: hexose transmembrane transport	1.64E-02
102	GO:0009793: embryo development ending in seed dormancy	1.67E-02
103	GO:0071215: cellular response to abscisic acid stimulus	1.74E-02
104	GO:0048443: stamen development	1.85E-02
105	GO:0070417: cellular response to cold	1.95E-02
106	GO:0016117: carotenoid biosynthetic process	1.95E-02
107	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.95E-02
108	GO:0010087: phloem or xylem histogenesis	2.07E-02
109	GO:0009058: biosynthetic process	2.16E-02
110	GO:0009958: positive gravitropism	2.18E-02
111	GO:0010268: brassinosteroid homeostasis	2.18E-02
112	GO:0007018: microtubule-based movement	2.29E-02
113	GO:0007059: chromosome segregation	2.29E-02
114	GO:0048825: cotyledon development	2.41E-02
115	GO:0016132: brassinosteroid biosynthetic process	2.53E-02
116	GO:0006633: fatty acid biosynthetic process	2.57E-02
117	GO:0010090: trichome morphogenesis	2.78E-02
118	GO:0009639: response to red or far red light	2.90E-02
119	GO:0016125: sterol metabolic process	2.90E-02
120	GO:0000910: cytokinesis	3.16E-02
121	GO:0009414: response to water deprivation	3.27E-02
122	GO:0016126: sterol biosynthetic process	3.29E-02
123	GO:0009911: positive regulation of flower development	3.29E-02
124	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.42E-02
125	GO:0010411: xyloglucan metabolic process	3.70E-02
126	GO:0048573: photoperiodism, flowering	3.70E-02
127	GO:0009737: response to abscisic acid	3.87E-02
128	GO:0048481: plant ovule development	3.97E-02
129	GO:0009416: response to light stimulus	4.21E-02
130	GO:0007568: aging	4.41E-02
131	GO:0009910: negative regulation of flower development	4.41E-02
132	GO:0009631: cold acclimation	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity	0.00E+00
2	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
3	GO:0019808: polyamine binding	0.00E+00
4	GO:0008710: 8-amino-7-oxononanoate synthase activity	0.00E+00
5	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
6	GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity	0.00E+00
7	GO:0017005: 3'-tyrosyl-DNA phosphodiesterase activity	0.00E+00
8	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	2.55E-04
9	GO:0004830: tryptophan-tRNA ligase activity	2.55E-04
10	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	2.55E-04
11	GO:0005290: L-histidine transmembrane transporter activity	2.55E-04
12	GO:0004008: copper-exporting ATPase activity	2.55E-04
13	GO:0009884: cytokinin receptor activity	5.64E-04
14	GO:0004829: threonine-tRNA ligase activity	5.64E-04
15	GO:0050017: L-3-cyanoalanine synthase activity	5.64E-04
16	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	5.64E-04
17	GO:0004047: aminomethyltransferase activity	5.64E-04
18	GO:0000064: L-ornithine transmembrane transporter activity	5.64E-04
19	GO:0050736: O-malonyltransferase activity	5.64E-04
20	GO:0032549: ribonucleoside binding	9.15E-04
21	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.15E-04
22	GO:0016805: dipeptidase activity	9.15E-04
23	GO:0005034: osmosensor activity	9.15E-04
24	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	9.15E-04
25	GO:0045548: phenylalanine ammonia-lyase activity	9.15E-04
26	GO:0004148: dihydrolipoyl dehydrogenase activity	9.15E-04
27	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.31E-03
28	GO:0017172: cysteine dioxygenase activity	1.31E-03
29	GO:0015189: L-lysine transmembrane transporter activity	1.31E-03
30	GO:0000254: C-4 methylsterol oxidase activity	1.31E-03
31	GO:0005354: galactose transmembrane transporter activity	1.31E-03
32	GO:0015181: arginine transmembrane transporter activity	1.31E-03
33	GO:0070628: proteasome binding	1.75E-03
34	GO:0009044: xylan 1,4-beta-xylosidase activity	1.75E-03
35	GO:0042277: peptide binding	1.75E-03
36	GO:0046556: alpha-L-arabinofuranosidase activity	1.75E-03
37	GO:0004845: uracil phosphoribosyltransferase activity	1.75E-03
38	GO:0010385: double-stranded methylated DNA binding	1.75E-03
39	GO:0004672: protein kinase activity	2.20E-03
40	GO:0005471: ATP:ADP antiporter activity	2.23E-03
41	GO:0005355: glucose transmembrane transporter activity	2.40E-03
42	GO:0031593: polyubiquitin binding	2.75E-03
43	GO:0004518: nuclease activity	2.94E-03
44	GO:0009927: histidine phosphotransfer kinase activity	3.30E-03
45	GO:0004849: uridine kinase activity	3.30E-03
46	GO:0004144: diacylglycerol O-acyltransferase activity	3.30E-03
47	GO:0004656: procollagen-proline 4-dioxygenase activity	3.30E-03
48	GO:0019900: kinase binding	3.30E-03
49	GO:0004124: cysteine synthase activity	3.30E-03
50	GO:0008235: metalloexopeptidase activity	3.89E-03
51	GO:0004427: inorganic diphosphatase activity	3.89E-03
52	GO:0043022: ribosome binding	4.52E-03
53	GO:0015144: carbohydrate transmembrane transporter activity	4.58E-03
54	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	5.18E-03
55	GO:0008142: oxysterol binding	5.18E-03
56	GO:0005375: copper ion transmembrane transporter activity	5.18E-03
57	GO:0005351: sugar:proton symporter activity	5.33E-03
58	GO:0004519: endonuclease activity	5.65E-03
59	GO:0004222: metalloendopeptidase activity	5.71E-03
60	GO:0003697: single-stranded DNA binding	6.56E-03
61	GO:0004673: protein histidine kinase activity	7.33E-03
62	GO:0004805: trehalose-phosphatase activity	7.33E-03
63	GO:0005525: GTP binding	7.51E-03
64	GO:0001054: RNA polymerase I activity	8.11E-03
65	GO:0004177: aminopeptidase activity	8.11E-03
66	GO:0000155: phosphorelay sensor kinase activity	9.75E-03
67	GO:0009982: pseudouridine synthase activity	9.75E-03
68	GO:0015266: protein channel activity	9.75E-03
69	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.75E-03
70	GO:0003690: double-stranded DNA binding	1.18E-02
71	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.24E-02
72	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.24E-02
73	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.24E-02
74	GO:0031418: L-ascorbic acid binding	1.34E-02
75	GO:0043130: ubiquitin binding	1.34E-02
76	GO:0043424: protein histidine kinase binding	1.43E-02
77	GO:0005345: purine nucleobase transmembrane transporter activity	1.43E-02
78	GO:0003723: RNA binding	1.49E-02
79	GO:0004812: aminoacyl-tRNA ligase activity	1.95E-02
80	GO:0019843: rRNA binding	2.05E-02
81	GO:0003924: GTPase activity	2.06E-02
82	GO:0004402: histone acetyltransferase activity	2.07E-02
83	GO:0004527: exonuclease activity	2.18E-02
84	GO:0008536: Ran GTPase binding	2.18E-02
85	GO:0030170: pyridoxal phosphate binding	2.27E-02
86	GO:0010181: FMN binding	2.29E-02
87	GO:0019901: protein kinase binding	2.41E-02
88	GO:0048038: quinone binding	2.53E-02
89	GO:0000156: phosphorelay response regulator activity	2.78E-02
90	GO:0051015: actin filament binding	2.78E-02
91	GO:0003684: damaged DNA binding	2.90E-02
92	GO:0016791: phosphatase activity	2.90E-02
93	GO:0008017: microtubule binding	2.96E-02
94	GO:0008237: metallopeptidase activity	3.03E-02
95	GO:0005200: structural constituent of cytoskeleton	3.03E-02
96	GO:0008483: transaminase activity	3.03E-02
97	GO:0008289: lipid binding	3.12E-02
98	GO:0042802: identical protein binding	3.59E-02
99	GO:0004806: triglyceride lipase activity	3.70E-02
100	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.97E-02
101	GO:0050897: cobalt ion binding	4.41E-02
102	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.41E-02
103	GO:0005524: ATP binding	4.42E-02
104	GO:0016301: kinase activity	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0009537: proplastid	0.00E+00
2	GO:0042597: periplasmic space	0.00E+00
3	GO:0009507: chloroplast	2.23E-06
4	GO:0009513: etioplast	5.64E-04
5	GO:0009509: chromoplast	9.15E-04
6	GO:0032432: actin filament bundle	1.31E-03
7	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	1.75E-03
8	GO:0031209: SCAR complex	2.75E-03
9	GO:0030529: intracellular ribonucleoprotein complex	3.97E-03
10	GO:0031305: integral component of mitochondrial inner membrane	4.52E-03
11	GO:0009501: amyloplast	4.52E-03
12	GO:0009536: plastid	4.86E-03
13	GO:0005811: lipid particle	5.18E-03
14	GO:0005736: DNA-directed RNA polymerase I complex	5.86E-03
15	GO:0005884: actin filament	8.11E-03
16	GO:0009570: chloroplast stroma	9.69E-03
17	GO:0016602: CCAAT-binding factor complex	9.75E-03
18	GO:0009574: preprophase band	9.75E-03
19	GO:0009532: plastid stroma	1.53E-02
20	GO:0009505: plant-type cell wall	1.59E-02
21	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.85E-02
22	GO:0005871: kinesin complex	1.95E-02
23	GO:0005770: late endosome	2.18E-02
24	GO:0005789: endoplasmic reticulum membrane	2.23E-02
25	GO:0031965: nuclear membrane	2.41E-02
26	GO:0005622: intracellular	2.80E-02
27	GO:0009295: nucleoid	3.03E-02
28	GO:0009707: chloroplast outer membrane	3.97E-02