co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G06690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019323: pentose catabolic process	0.00E+00
2	GO:0000455: enzyme-directed rRNA pseudouridine synthesis	0.00E+00
3	GO:0017038: protein import	0.00E+00
4	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
5	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
6	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
7	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
8	GO:0046838: phosphorylated carbohydrate dephosphorylation	0.00E+00
9	GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
10	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
11	GO:0042407: cristae formation	0.00E+00
12	GO:0007638: mechanosensory behavior	0.00E+00
13	GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)	0.00E+00
14	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
15	GO:0008298: intracellular mRNA localization	0.00E+00
16	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
17	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
18	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
19	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
20	GO:0070125: mitochondrial translational elongation	0.00E+00
21	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
22	GO:0070979: protein K11-linked ubiquitination	0.00E+00
23	GO:0061157: mRNA destabilization	0.00E+00
24	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
25	GO:0015995: chlorophyll biosynthetic process	1.00E-05
26	GO:1900871: chloroplast mRNA modification	2.34E-05
27	GO:0018026: peptidyl-lysine monomethylation	2.34E-05
28	GO:1901259: chloroplast rRNA processing	3.23E-05
29	GO:0048437: floral organ development	4.95E-05
30	GO:0009657: plastid organization	9.91E-05
31	GO:0046739: transport of virus in multicellular host	1.56E-04
32	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.56E-04
33	GO:0009773: photosynthetic electron transport in photosystem I	2.64E-04
34	GO:0009742: brassinosteroid mediated signaling pathway	2.88E-04
35	GO:0009793: embryo development ending in seed dormancy	2.95E-04
36	GO:0005983: starch catabolic process	3.19E-04
37	GO:0009658: chloroplast organization	5.21E-04
38	GO:0042793: transcription from plastid promoter	5.47E-04
39	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	5.47E-04
40	GO:0010027: thylakoid membrane organization	5.88E-04
41	GO:0042372: phylloquinone biosynthetic process	7.23E-04
42	GO:0000967: rRNA 5'-end processing	7.44E-04
43	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	7.44E-04
44	GO:0000025: maltose catabolic process	7.44E-04
45	GO:0044262: cellular carbohydrate metabolic process	7.44E-04
46	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	7.44E-04
47	GO:0043266: regulation of potassium ion transport	7.44E-04
48	GO:0010063: positive regulation of trichoblast fate specification	7.44E-04
49	GO:0005980: glycogen catabolic process	7.44E-04
50	GO:0030198: extracellular matrix organization	7.44E-04
51	GO:0010480: microsporocyte differentiation	7.44E-04
52	GO:0042759: long-chain fatty acid biosynthetic process	7.44E-04
53	GO:0042371: vitamin K biosynthetic process	7.44E-04
54	GO:0043686: co-translational protein modification	7.44E-04
55	GO:2000021: regulation of ion homeostasis	7.44E-04
56	GO:0043007: maintenance of rDNA	7.44E-04
57	GO:0051247: positive regulation of protein metabolic process	7.44E-04
58	GO:1902458: positive regulation of stomatal opening	7.44E-04
59	GO:0015904: tetracycline transport	7.44E-04
60	GO:2000905: negative regulation of starch metabolic process	7.44E-04
61	GO:0005991: trehalose metabolic process	7.44E-04
62	GO:0000023: maltose metabolic process	7.44E-04
63	GO:0000476: maturation of 4.5S rRNA	7.44E-04
64	GO:0009451: RNA modification	8.35E-04
65	GO:0009772: photosynthetic electron transport in photosystem II	9.22E-04
66	GO:0046620: regulation of organ growth	1.14E-03
67	GO:0010497: plasmodesmata-mediated intercellular transport	1.40E-03
68	GO:0080022: primary root development	1.50E-03
69	GO:0010087: phloem or xylem histogenesis	1.50E-03
70	GO:0009629: response to gravity	1.61E-03
71	GO:0006432: phenylalanyl-tRNA aminoacylation	1.61E-03
72	GO:0007154: cell communication	1.61E-03
73	GO:0071497: cellular response to freezing	1.61E-03
74	GO:1900033: negative regulation of trichome patterning	1.61E-03
75	GO:0042325: regulation of phosphorylation	1.61E-03
76	GO:1904143: positive regulation of carotenoid biosynthetic process	1.61E-03
77	GO:0009786: regulation of asymmetric cell division	1.61E-03
78	GO:0031648: protein destabilization	1.61E-03
79	GO:0006423: cysteinyl-tRNA aminoacylation	1.61E-03
80	GO:0001682: tRNA 5'-leader removal	1.61E-03
81	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.61E-03
82	GO:0006568: tryptophan metabolic process	1.61E-03
83	GO:0034470: ncRNA processing	1.61E-03
84	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.61E-03
85	GO:0010182: sugar mediated signaling pathway	1.66E-03
86	GO:0010305: leaf vascular tissue pattern formation	1.66E-03
87	GO:0016042: lipid catabolic process	1.87E-03
88	GO:1900865: chloroplast RNA modification	1.99E-03
89	GO:0031425: chloroplast RNA processing	1.99E-03
90	GO:0009416: response to light stimulus	2.44E-03
91	GO:0033591: response to L-ascorbic acid	2.65E-03
92	GO:0048586: regulation of long-day photoperiodism, flowering	2.65E-03
93	GO:0006954: inflammatory response	2.65E-03
94	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.65E-03
95	GO:0019684: photosynthesis, light reaction	2.69E-03
96	GO:0010588: cotyledon vascular tissue pattern formation	3.52E-03
97	GO:0009767: photosynthetic electron transport chain	3.52E-03
98	GO:0015979: photosynthesis	3.81E-03
99	GO:0010306: rhamnogalacturonan II biosynthetic process	3.86E-03
100	GO:0010239: chloroplast mRNA processing	3.86E-03
101	GO:0010731: protein glutathionylation	3.86E-03
102	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.86E-03
103	GO:0043572: plastid fission	3.86E-03
104	GO:0090308: regulation of methylation-dependent chromatin silencing	3.86E-03
105	GO:0016556: mRNA modification	3.86E-03
106	GO:0010071: root meristem specification	3.86E-03
107	GO:0007231: osmosensory signaling pathway	3.86E-03
108	GO:0009102: biotin biosynthetic process	3.86E-03
109	GO:0030071: regulation of mitotic metaphase/anaphase transition	3.86E-03
110	GO:0010601: positive regulation of auxin biosynthetic process	3.86E-03
111	GO:0010207: photosystem II assembly	3.97E-03
112	GO:0048367: shoot system development	4.05E-03
113	GO:0033500: carbohydrate homeostasis	5.22E-03
114	GO:0009765: photosynthesis, light harvesting	5.22E-03
115	GO:2000306: positive regulation of photomorphogenesis	5.22E-03
116	GO:0022622: root system development	5.22E-03
117	GO:0006221: pyrimidine nucleotide biosynthetic process	5.22E-03
118	GO:0008295: spermidine biosynthetic process	5.22E-03
119	GO:1901141: regulation of lignin biosynthetic process	5.22E-03
120	GO:0048629: trichome patterning	5.22E-03
121	GO:0010109: regulation of photosynthesis	5.22E-03
122	GO:0042274: ribosomal small subunit biogenesis	5.22E-03
123	GO:0009813: flavonoid biosynthetic process	5.25E-03
124	GO:0032876: negative regulation of DNA endoreduplication	6.71E-03
125	GO:0032543: mitochondrial translation	6.71E-03
126	GO:0006564: L-serine biosynthetic process	6.71E-03
127	GO:0010236: plastoquinone biosynthetic process	6.71E-03
128	GO:0045038: protein import into chloroplast thylakoid membrane	6.71E-03
129	GO:0031365: N-terminal protein amino acid modification	6.71E-03
130	GO:0009107: lipoate biosynthetic process	6.71E-03
131	GO:0016123: xanthophyll biosynthetic process	6.71E-03
132	GO:0000304: response to singlet oxygen	6.71E-03
133	GO:0061077: chaperone-mediated protein folding	6.73E-03
134	GO:0006730: one-carbon metabolic process	7.38E-03
135	GO:0009686: gibberellin biosynthetic process	8.07E-03
136	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	8.35E-03
137	GO:0016554: cytidine to uridine editing	8.35E-03
138	GO:0032973: amino acid export	8.35E-03
139	GO:0018258: protein O-linked glycosylation via hydroxyproline	8.35E-03
140	GO:0000741: karyogamy	8.35E-03
141	GO:0010405: arabinogalactan protein metabolic process	8.35E-03
142	GO:0009959: negative gravitropism	8.35E-03
143	GO:0006655: phosphatidylglycerol biosynthetic process	8.35E-03
144	GO:0006458: 'de novo' protein folding	1.01E-02
145	GO:0017148: negative regulation of translation	1.01E-02
146	GO:0048280: vesicle fusion with Golgi apparatus	1.01E-02
147	GO:0042026: protein refolding	1.01E-02
148	GO:0030488: tRNA methylation	1.01E-02
149	GO:2000033: regulation of seed dormancy process	1.01E-02
150	GO:0080086: stamen filament development	1.01E-02
151	GO:0040008: regulation of growth	1.10E-02
152	GO:0010197: polar nucleus fusion	1.11E-02
153	GO:0009958: positive gravitropism	1.11E-02
154	GO:0006855: drug transmembrane transport	1.13E-02
155	GO:0010444: guard mother cell differentiation	1.20E-02
156	GO:0032880: regulation of protein localization	1.20E-02
157	GO:0010161: red light signaling pathway	1.20E-02
158	GO:0009646: response to absence of light	1.20E-02
159	GO:0043090: amino acid import	1.20E-02
160	GO:0006605: protein targeting	1.40E-02
161	GO:0010078: maintenance of root meristem identity	1.40E-02
162	GO:0032875: regulation of DNA endoreduplication	1.40E-02
163	GO:2000070: regulation of response to water deprivation	1.40E-02
164	GO:0006353: DNA-templated transcription, termination	1.40E-02
165	GO:0070413: trehalose metabolism in response to stress	1.40E-02
166	GO:0000105: histidine biosynthetic process	1.40E-02
167	GO:0009231: riboflavin biosynthetic process	1.40E-02
168	GO:0007155: cell adhesion	1.40E-02
169	GO:0032502: developmental process	1.48E-02
170	GO:1901657: glycosyl compound metabolic process	1.57E-02
171	GO:0015996: chlorophyll catabolic process	1.61E-02
172	GO:0010100: negative regulation of photomorphogenesis	1.61E-02
173	GO:0007186: G-protein coupled receptor signaling pathway	1.61E-02
174	GO:0032544: plastid translation	1.61E-02
175	GO:0043562: cellular response to nitrogen levels	1.61E-02
176	GO:0010099: regulation of photomorphogenesis	1.61E-02
177	GO:0071482: cellular response to light stimulus	1.61E-02
178	GO:0009733: response to auxin	1.67E-02
179	GO:0080144: amino acid homeostasis	1.83E-02
180	GO:0046916: cellular transition metal ion homeostasis	1.83E-02
181	GO:0006783: heme biosynthetic process	1.83E-02
182	GO:0000373: Group II intron splicing	1.83E-02
183	GO:0048507: meristem development	1.83E-02
184	GO:0000902: cell morphogenesis	1.83E-02
185	GO:0051865: protein autoubiquitination	1.83E-02
186	GO:0046685: response to arsenic-containing substance	1.83E-02
187	GO:0009740: gibberellic acid mediated signaling pathway	1.97E-02
188	GO:0009638: phototropism	2.06E-02
189	GO:0043067: regulation of programmed cell death	2.06E-02
190	GO:0006779: porphyrin-containing compound biosynthetic process	2.06E-02
191	GO:0009098: leucine biosynthetic process	2.06E-02
192	GO:0006397: mRNA processing	2.07E-02
193	GO:0010029: regulation of seed germination	2.12E-02
194	GO:0009299: mRNA transcription	2.30E-02
195	GO:0010162: seed dormancy process	2.30E-02
196	GO:0006896: Golgi to vacuole transport	2.30E-02
197	GO:0006782: protoporphyrinogen IX biosynthetic process	2.30E-02
198	GO:0048829: root cap development	2.30E-02
199	GO:0045036: protein targeting to chloroplast	2.30E-02
200	GO:0009641: shade avoidance	2.30E-02
201	GO:0009073: aromatic amino acid family biosynthetic process	2.55E-02
202	GO:0006816: calcium ion transport	2.55E-02
203	GO:0048229: gametophyte development	2.55E-02
204	GO:0006415: translational termination	2.55E-02
205	GO:0010216: maintenance of DNA methylation	2.55E-02
206	GO:0009684: indoleacetic acid biosynthetic process	2.55E-02
207	GO:0010015: root morphogenesis	2.55E-02
208	GO:0018298: protein-chromophore linkage	2.62E-02
209	GO:0016024: CDP-diacylglycerol biosynthetic process	2.81E-02
210	GO:0045037: protein import into chloroplast stroma	2.81E-02
211	GO:0048527: lateral root development	3.03E-02
212	GO:0010628: positive regulation of gene expression	3.08E-02
213	GO:2000012: regulation of auxin polar transport	3.08E-02
214	GO:0006006: glucose metabolic process	3.08E-02
215	GO:0010102: lateral root morphogenesis	3.08E-02
216	GO:0050826: response to freezing	3.08E-02
217	GO:0009718: anthocyanin-containing compound biosynthetic process	3.08E-02
218	GO:0010075: regulation of meristem growth	3.08E-02
219	GO:0009725: response to hormone	3.08E-02
220	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.30E-02
221	GO:0045087: innate immune response	3.32E-02
222	GO:0048467: gynoecium development	3.36E-02
223	GO:0010020: chloroplast fission	3.36E-02
224	GO:0009266: response to temperature stimulus	3.36E-02
225	GO:0009934: regulation of meristem structural organization	3.36E-02
226	GO:0009790: embryo development	3.43E-02
227	GO:0019853: L-ascorbic acid biosynthetic process	3.64E-02
228	GO:0010030: positive regulation of seed germination	3.64E-02
229	GO:0070588: calcium ion transmembrane transport	3.64E-02
230	GO:0000162: tryptophan biosynthetic process	3.94E-02
231	GO:0010025: wax biosynthetic process	3.94E-02
232	GO:0006071: glycerol metabolic process	3.94E-02
233	GO:0006631: fatty acid metabolic process	3.95E-02
234	GO:0080147: root hair cell development	4.24E-02
235	GO:0010187: negative regulation of seed germination	4.24E-02
236	GO:0005992: trehalose biosynthetic process	4.24E-02
237	GO:0009735: response to cytokinin	4.33E-02
238	GO:0008299: isoprenoid biosynthetic process	4.54E-02
239	GO:0006418: tRNA aminoacylation for protein translation	4.54E-02
240	GO:0031408: oxylipin biosynthetic process	4.86E-02
241	GO:0048511: rhythmic process	4.86E-02
242	GO:0007166: cell surface receptor signaling pathway	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
2	GO:0005363: maltose transmembrane transporter activity	0.00E+00
3	GO:0090711: FMN hydrolase activity	0.00E+00
4	GO:0004823: leucine-tRNA ligase activity	0.00E+00
5	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
6	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
7	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
8	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
9	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
10	GO:0005201: extracellular matrix structural constituent	0.00E+00
11	GO:0004076: biotin synthase activity	0.00E+00
12	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
13	GO:0005528: FK506 binding	3.09E-06
14	GO:0045430: chalcone isomerase activity	4.85E-06
15	GO:0003723: RNA binding	7.21E-05
16	GO:0005504: fatty acid binding	7.57E-05
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	7.77E-05
18	GO:0043495: protein anchor	2.63E-04
19	GO:0016279: protein-lysine N-methyltransferase activity	2.63E-04
20	GO:0008266: poly(U) RNA binding	4.48E-04
21	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	7.23E-04
22	GO:0051777: ent-kaurenoate oxidase activity	7.44E-04
23	GO:0004856: xylulokinase activity	7.44E-04
24	GO:0016776: phosphotransferase activity, phosphate group as acceptor	7.44E-04
25	GO:0004134: 4-alpha-glucanotransferase activity	7.44E-04
26	GO:0008184: glycogen phosphorylase activity	7.44E-04
27	GO:0004645: phosphorylase activity	7.44E-04
28	GO:0019203: carbohydrate phosphatase activity	7.44E-04
29	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	7.44E-04
30	GO:0080042: ADP-glucose pyrophosphohydrolase activity	7.44E-04
31	GO:0050308: sugar-phosphatase activity	7.44E-04
32	GO:0005080: protein kinase C binding	7.44E-04
33	GO:0008835: diaminohydroxyphosphoribosylaminopyrimidine deaminase activity	7.44E-04
34	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	7.44E-04
35	GO:0042586: peptide deformylase activity	7.44E-04
36	GO:0010313: phytochrome binding	7.44E-04
37	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	7.44E-04
38	GO:0050139: nicotinate-N-glucosyltransferase activity	7.44E-04
39	GO:0004425: indole-3-glycerol-phosphate synthase activity	7.44E-04
40	GO:0019899: enzyme binding	9.22E-04
41	GO:0004817: cysteine-tRNA ligase activity	1.61E-03
42	GO:0004750: ribulose-phosphate 3-epimerase activity	1.61E-03
43	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.61E-03
44	GO:0016630: protochlorophyllide reductase activity	1.61E-03
45	GO:0008493: tetracycline transporter activity	1.61E-03
46	GO:0030385: ferredoxin:thioredoxin reductase activity	1.61E-03
47	GO:0004826: phenylalanine-tRNA ligase activity	1.61E-03
48	GO:0017118: lipoyltransferase activity	1.61E-03
49	GO:0003852: 2-isopropylmalate synthase activity	1.61E-03
50	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.61E-03
51	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.61E-03
52	GO:0043425: bHLH transcription factor binding	1.61E-03
53	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.61E-03
54	GO:0004617: phosphoglycerate dehydrogenase activity	1.61E-03
55	GO:0004766: spermidine synthase activity	1.61E-03
56	GO:0004519: endonuclease activity	2.40E-03
57	GO:0016992: lipoate synthase activity	2.65E-03
58	GO:0003913: DNA photolyase activity	2.65E-03
59	GO:0004751: ribose-5-phosphate isomerase activity	2.65E-03
60	GO:0002161: aminoacyl-tRNA editing activity	2.65E-03
61	GO:0045174: glutathione dehydrogenase (ascorbate) activity	2.65E-03
62	GO:0004148: dihydrolipoyl dehydrogenase activity	2.65E-03
63	GO:0016805: dipeptidase activity	2.65E-03
64	GO:0070402: NADPH binding	2.65E-03
65	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.65E-03
66	GO:0004180: carboxypeptidase activity	2.65E-03
67	GO:0031072: heat shock protein binding	3.52E-03
68	GO:0016149: translation release factor activity, codon specific	3.86E-03
69	GO:0009041: uridylate kinase activity	3.86E-03
70	GO:0043023: ribosomal large subunit binding	3.86E-03
71	GO:0016851: magnesium chelatase activity	3.86E-03
72	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	3.86E-03
73	GO:0080032: methyl jasmonate esterase activity	5.22E-03
74	GO:0019199: transmembrane receptor protein kinase activity	5.22E-03
75	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	5.22E-03
76	GO:0004659: prenyltransferase activity	5.22E-03
77	GO:0015238: drug transmembrane transporter activity	5.25E-03
78	GO:0003959: NADPH dehydrogenase activity	6.71E-03
79	GO:0016846: carbon-sulfur lyase activity	6.71E-03
80	GO:0016773: phosphotransferase activity, alcohol group as acceptor	6.71E-03
81	GO:0004176: ATP-dependent peptidase activity	6.73E-03
82	GO:0016788: hydrolase activity, acting on ester bonds	6.97E-03
83	GO:0022891: substrate-specific transmembrane transporter activity	8.07E-03
84	GO:0016208: AMP binding	8.35E-03
85	GO:0004629: phospholipase C activity	8.35E-03
86	GO:0008200: ion channel inhibitor activity	8.35E-03
87	GO:2001070: starch binding	8.35E-03
88	GO:0080030: methyl indole-3-acetate esterase activity	8.35E-03
89	GO:1990714: hydroxyproline O-galactosyltransferase activity	8.35E-03
90	GO:0004526: ribonuclease P activity	8.35E-03
91	GO:0004435: phosphatidylinositol phospholipase C activity	1.01E-02
92	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.01E-02
93	GO:0008195: phosphatidate phosphatase activity	1.01E-02
94	GO:0052689: carboxylic ester hydrolase activity	1.17E-02
95	GO:0004033: aldo-keto reductase (NADP) activity	1.40E-02
96	GO:0046914: transition metal ion binding	1.61E-02
97	GO:0008173: RNA methyltransferase activity	1.61E-02
98	GO:0042802: identical protein binding	1.70E-02
99	GO:0008237: metallopeptidase activity	1.78E-02
100	GO:0008889: glycerophosphodiester phosphodiesterase activity	1.83E-02
101	GO:0008138: protein tyrosine/serine/threonine phosphatase activity	1.83E-02
102	GO:0003747: translation release factor activity	1.83E-02
103	GO:0016597: amino acid binding	1.89E-02
104	GO:0016168: chlorophyll binding	2.12E-02
105	GO:0051082: unfolded protein binding	2.13E-02
106	GO:0015020: glucuronosyltransferase activity	2.30E-02
107	GO:0004721: phosphoprotein phosphatase activity	2.37E-02
108	GO:0102483: scopolin beta-glucosidase activity	2.37E-02
109	GO:0008559: xenobiotic-transporting ATPase activity	2.55E-02
110	GO:0044183: protein binding involved in protein folding	2.55E-02
111	GO:0000049: tRNA binding	2.81E-02
112	GO:0019843: rRNA binding	2.83E-02
113	GO:0004089: carbonate dehydratase activity	3.08E-02
114	GO:0005262: calcium channel activity	3.08E-02
115	GO:0019888: protein phosphatase regulator activity	3.08E-02
116	GO:0009982: pseudouridine synthase activity	3.08E-02
117	GO:0003725: double-stranded RNA binding	3.08E-02
118	GO:0008083: growth factor activity	3.36E-02
119	GO:0008422: beta-glucosidase activity	3.63E-02
120	GO:0008146: sulfotransferase activity	3.64E-02
121	GO:0051539: 4 iron, 4 sulfur cluster binding	3.79E-02
122	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.86E-02
123	GO:0015297: antiporter activity	3.98E-02
124	GO:0004364: glutathione transferase activity	4.11E-02
125	GO:0004871: signal transducer activity	4.36E-02
126	GO:0043424: protein histidine kinase binding	4.54E-02
127	GO:0043621: protein self-association	4.62E-02
128	GO:0035091: phosphatidylinositol binding	4.62E-02
129	GO:0033612: receptor serine/threonine kinase binding	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0009571: proplastid stroma	0.00E+00
2	GO:0009507: chloroplast	8.04E-40
3	GO:0009570: chloroplast stroma	3.69E-24
4	GO:0009941: chloroplast envelope	3.00E-13
5	GO:0009535: chloroplast thylakoid membrane	5.05E-10
6	GO:0009508: plastid chromosome	8.49E-07
7	GO:0009534: chloroplast thylakoid	1.28E-06
8	GO:0009295: nucleoid	4.29E-06
9	GO:0009543: chloroplast thylakoid lumen	1.01E-05
10	GO:0031969: chloroplast membrane	4.64E-05
11	GO:0009579: thylakoid	4.55E-04
12	GO:0010319: stromule	4.90E-04
13	GO:0009344: nitrite reductase complex [NAD(P)H]	7.44E-04
14	GO:0009547: plastid ribosome	7.44E-04
15	GO:0009501: amyloplast	1.14E-03
16	GO:0000778: condensed nuclear chromosome kinetochore	1.61E-03
17	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.61E-03
18	GO:0043231: intracellular membrane-bounded organelle	2.47E-03
19	GO:0033281: TAT protein transport complex	2.65E-03
20	GO:0009528: plastid inner membrane	2.65E-03
21	GO:0010007: magnesium chelatase complex	2.65E-03
22	GO:0030139: endocytic vesicle	2.65E-03
23	GO:0030529: intracellular ribonucleoprotein complex	3.50E-03
24	GO:0009536: plastid	3.50E-03
25	GO:0042646: plastid nucleoid	3.86E-03
26	GO:0032585: multivesicular body membrane	3.86E-03
27	GO:0009706: chloroplast inner membrane	5.13E-03
28	GO:0009544: chloroplast ATP synthase complex	5.22E-03
29	GO:0009527: plastid outer membrane	5.22E-03
30	GO:0009654: photosystem II oxygen evolving complex	6.12E-03
31	GO:0042651: thylakoid membrane	6.12E-03
32	GO:0031977: thylakoid lumen	8.35E-03
33	GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)	8.35E-03
34	GO:0009986: cell surface	1.20E-02
35	GO:0009533: chloroplast stromal thylakoid	1.20E-02
36	GO:0009523: photosystem II	1.29E-02
37	GO:0019898: extrinsic component of membrane	1.29E-02
38	GO:0012507: ER to Golgi transport vesicle membrane	1.40E-02
39	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	1.83E-02
40	GO:0042644: chloroplast nucleoid	1.83E-02
41	GO:0005720: nuclear heterochromatin	1.83E-02
42	GO:0005680: anaphase-promoting complex	1.83E-02
43	GO:0016604: nuclear body	2.06E-02
44	GO:0000159: protein phosphatase type 2A complex	2.55E-02
45	GO:0005884: actin filament	2.55E-02
46	GO:0009707: chloroplast outer membrane	2.62E-02
47	GO:0000311: plastid large ribosomal subunit	2.81E-02
48	GO:0030095: chloroplast photosystem II	3.36E-02
49	GO:0043234: protein complex	3.94E-02
50	GO:0031902: late endosome membrane	3.95E-02
51	GO:0009532: plastid stroma	4.86E-02