Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G05370

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:2000117: negative regulation of cysteine-type endopeptidase activity0.00E+00
2GO:0010398: xylogalacturonan metabolic process0.00E+00
3GO:1900409: positive regulation of cellular response to oxidative stress0.00E+00
4GO:0016139: glycoside catabolic process0.00E+00
5GO:0072722: response to amitrole0.00E+00
6GO:0006216: cytidine catabolic process0.00E+00
7GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
8GO:0006099: tricarboxylic acid cycle1.67E-06
9GO:0046283: anthocyanin-containing compound metabolic process5.95E-06
10GO:0006564: L-serine biosynthetic process5.95E-06
11GO:0006102: isocitrate metabolic process2.41E-05
12GO:0000162: tryptophan biosynthetic process1.35E-04
13GO:1902000: homogentisate catabolic process1.41E-04
14GO:0043132: NAD transport1.41E-04
15GO:0031204: posttranslational protein targeting to membrane, translocation1.41E-04
16GO:0006123: mitochondrial electron transport, cytochrome c to oxygen1.41E-04
17GO:0046939: nucleotide phosphorylation1.41E-04
18GO:0044375: regulation of peroxisome size2.40E-04
19GO:0010272: response to silver ion2.40E-04
20GO:0009072: aromatic amino acid family metabolic process2.40E-04
21GO:0006591: ornithine metabolic process2.40E-04
22GO:0055074: calcium ion homeostasis2.40E-04
23GO:0000187: activation of MAPK activity3.49E-04
24GO:0015858: nucleoside transport3.49E-04
25GO:0010188: response to microbial phytotoxin4.66E-04
26GO:0009615: response to virus5.54E-04
27GO:0097428: protein maturation by iron-sulfur cluster transfer5.92E-04
28GO:0060918: auxin transport7.24E-04
29GO:0009972: cytidine deamination7.24E-04
30GO:0006121: mitochondrial electron transport, succinate to ubiquinone7.24E-04
31GO:0010264: myo-inositol hexakisphosphate biosynthetic process7.24E-04
32GO:0009228: thiamine biosynthetic process7.24E-04
33GO:0009407: toxin catabolic process7.87E-04
34GO:0009082: branched-chain amino acid biosynthetic process8.63E-04
35GO:0009099: valine biosynthetic process8.63E-04
36GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c1.01E-03
37GO:0022904: respiratory electron transport chain1.01E-03
38GO:0071669: plant-type cell wall organization or biogenesis1.01E-03
39GO:0000209: protein polyubiquitination1.18E-03
40GO:0009097: isoleucine biosynthetic process1.32E-03
41GO:0010204: defense response signaling pathway, resistance gene-independent1.32E-03
42GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.37E-03
43GO:0009821: alkaloid biosynthetic process1.48E-03
44GO:0009060: aerobic respiration1.48E-03
45GO:0042742: defense response to bacterium1.54E-03
46GO:0009098: leucine biosynthetic process1.65E-03
47GO:0006032: chitin catabolic process1.83E-03
48GO:0043069: negative regulation of programmed cell death1.83E-03
49GO:0009626: plant-type hypersensitive response1.90E-03
50GO:0000272: polysaccharide catabolic process2.02E-03
51GO:0052544: defense response by callose deposition in cell wall2.02E-03
52GO:0071365: cellular response to auxin stimulus2.21E-03
53GO:0055114: oxidation-reduction process2.33E-03
54GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process2.41E-03
55GO:0055046: microgametogenesis2.41E-03
56GO:0007030: Golgi organization2.82E-03
57GO:0010167: response to nitrate2.82E-03
58GO:0010150: leaf senescence3.68E-03
59GO:0016998: cell wall macromolecule catabolic process3.72E-03
60GO:0009814: defense response, incompatible interaction3.95E-03
61GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process4.11E-03
62GO:0009306: protein secretion4.44E-03
63GO:0009561: megagametogenesis4.44E-03
64GO:0010051: xylem and phloem pattern formation4.95E-03
65GO:0006662: glycerol ether metabolic process5.21E-03
66GO:0045489: pectin biosynthetic process5.21E-03
67GO:0048544: recognition of pollen5.48E-03
68GO:0009851: auxin biosynthetic process5.75E-03
69GO:0010183: pollen tube guidance5.75E-03
70GO:0009630: gravitropism6.31E-03
71GO:1901657: glycosyl compound metabolic process6.59E-03
72GO:0006464: cellular protein modification process6.88E-03
73GO:0006979: response to oxidative stress7.88E-03
74GO:0009627: systemic acquired resistance8.40E-03
75GO:0045454: cell redox homeostasis8.40E-03
76GO:0006499: N-terminal protein myristoylation1.00E-02
77GO:0009631: cold acclimation1.04E-02
78GO:0009753: response to jasmonic acid1.11E-02
79GO:0034599: cellular response to oxidative stress1.14E-02
80GO:0006839: mitochondrial transport1.21E-02
81GO:0008283: cell proliferation1.32E-02
82GO:0051707: response to other organism1.32E-02
83GO:0042546: cell wall biogenesis1.36E-02
84GO:0046686: response to cadmium ion1.37E-02
85GO:0009636: response to toxic substance1.44E-02
86GO:0000165: MAPK cascade1.51E-02
87GO:0031347: regulation of defense response1.51E-02
88GO:0051603: proteolysis involved in cellular protein catabolic process1.67E-02
89GO:0009735: response to cytokinin1.69E-02
90GO:0009620: response to fungus1.97E-02
91GO:0006396: RNA processing2.14E-02
92GO:0051726: regulation of cell cycle2.19E-02
93GO:0009058: biosynthetic process2.55E-02
94GO:0042744: hydrogen peroxide catabolic process2.70E-02
95GO:0009739: response to gibberellin3.35E-02
96GO:0009826: unidimensional cell growth4.11E-02
97GO:0009723: response to ethylene4.68E-02
98GO:0015031: protein transport4.73E-02
99GO:0080167: response to karrikin4.92E-02
RankGO TermAdjusted P value
1GO:0051765: inositol tetrakisphosphate kinase activity0.00E+00
2GO:0044610: FMN transmembrane transporter activity0.00E+00
3GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity0.00E+00
4GO:0016034: maleylacetoacetate isomerase activity0.00E+00
5GO:0051766: inositol trisphosphate kinase activity0.00E+00
6GO:0047844: deoxycytidine deaminase activity0.00E+00
7GO:0004449: isocitrate dehydrogenase (NAD+) activity1.83E-06
8GO:0047326: inositol tetrakisphosphate 5-kinase activity5.79E-05
9GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity5.79E-05
10GO:0048037: cofactor binding5.79E-05
11GO:0015230: FAD transmembrane transporter activity5.79E-05
12GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity5.79E-05
13GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity5.79E-05
14GO:0004425: indole-3-glycerol-phosphate synthase activity5.79E-05
15GO:0000824: inositol tetrakisphosphate 3-kinase activity5.79E-05
16GO:0033984: indole-3-glycerol-phosphate lyase activity5.79E-05
17GO:0019172: glyoxalase III activity1.41E-04
18GO:0004776: succinate-CoA ligase (GDP-forming) activity1.41E-04
19GO:0015228: coenzyme A transmembrane transporter activity1.41E-04
20GO:0004617: phosphoglycerate dehydrogenase activity1.41E-04
21GO:0051724: NAD transporter activity1.41E-04
22GO:0046593: mandelonitrile lyase activity1.41E-04
23GO:0004775: succinate-CoA ligase (ADP-forming) activity1.41E-04
24GO:0003955: NAD(P)H dehydrogenase (quinone) activity2.40E-04
25GO:0052656: L-isoleucine transaminase activity3.49E-04
26GO:0052654: L-leucine transaminase activity3.49E-04
27GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity3.49E-04
28GO:0052655: L-valine transaminase activity3.49E-04
29GO:0019201: nucleotide kinase activity3.49E-04
30GO:0004834: tryptophan synthase activity4.66E-04
31GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor4.66E-04
32GO:0005086: ARF guanyl-nucleotide exchange factor activity4.66E-04
33GO:0004084: branched-chain-amino-acid transaminase activity4.66E-04
34GO:0000104: succinate dehydrogenase activity5.92E-04
35GO:0008177: succinate dehydrogenase (ubiquinone) activity5.92E-04
36GO:0051538: 3 iron, 4 sulfur cluster binding5.92E-04
37GO:0080122: AMP transmembrane transporter activity5.92E-04
38GO:0035252: UDP-xylosyltransferase activity7.24E-04
39GO:0004017: adenylate kinase activity8.63E-04
40GO:0005347: ATP transmembrane transporter activity8.63E-04
41GO:0015217: ADP transmembrane transporter activity8.63E-04
42GO:0004126: cytidine deaminase activity8.63E-04
43GO:0004364: glutathione transferase activity1.10E-03
44GO:0004708: MAP kinase kinase activity1.16E-03
45GO:0051287: NAD binding1.37E-03
46GO:0016844: strictosidine synthase activity1.65E-03
47GO:0009055: electron carrier activity1.69E-03
48GO:0004568: chitinase activity1.83E-03
49GO:0008794: arsenate reductase (glutaredoxin) activity2.02E-03
50GO:0015035: protein disulfide oxidoreductase activity2.21E-03
51GO:0031624: ubiquitin conjugating enzyme binding2.62E-03
52GO:0008061: chitin binding2.82E-03
53GO:0008270: zinc ion binding4.12E-03
54GO:0047134: protein-disulfide reductase activity4.69E-03
55GO:0005507: copper ion binding4.99E-03
56GO:0008080: N-acetyltransferase activity5.21E-03
57GO:0001085: RNA polymerase II transcription factor binding5.21E-03
58GO:0004791: thioredoxin-disulfide reductase activity5.48E-03
59GO:0010181: FMN binding5.48E-03
60GO:0004601: peroxidase activity5.66E-03
61GO:0043531: ADP binding6.21E-03
62GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.59E-03
63GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity7.18E-03
64GO:0061630: ubiquitin protein ligase activity7.38E-03
65GO:0016597: amino acid binding7.47E-03
66GO:0102483: scopolin beta-glucosidase activity8.71E-03
67GO:0003824: catalytic activity8.77E-03
68GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity9.36E-03
69GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding1.04E-02
70GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.11E-02
71GO:0008422: beta-glucosidase activity1.18E-02
72GO:0051539: 4 iron, 4 sulfur cluster binding1.21E-02
73GO:0051537: 2 iron, 2 sulfur cluster binding1.40E-02
74GO:0005198: structural molecule activity1.44E-02
75GO:0051082: unfolded protein binding2.10E-02
76GO:0016740: transferase activity2.25E-02
77GO:0030246: carbohydrate binding2.49E-02
78GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.70E-02
79GO:0008565: protein transporter activity2.80E-02
80GO:0015297: antiporter activity2.99E-02
81GO:0008194: UDP-glycosyltransferase activity3.35E-02
82GO:0005509: calcium ion binding3.45E-02
83GO:0016757: transferase activity, transferring glycosyl groups3.64E-02
84GO:0000287: magnesium ion binding4.17E-02
85GO:0016788: hydrolase activity, acting on ester bonds4.28E-02
86GO:0003682: chromatin binding4.39E-02
87GO:0016491: oxidoreductase activity4.90E-02
RankGO TermAdjusted P value
1GO:0005784: Sec61 translocon complex0.00E+00
2GO:0031205: endoplasmic reticulum Sec complex0.00E+00
3GO:0031901: early endosome membrane3.87E-05
4GO:0045281: succinate dehydrogenase complex1.41E-04
5GO:0046861: glyoxysomal membrane2.40E-04
6GO:0032588: trans-Golgi network membrane7.24E-04
7GO:0030173: integral component of Golgi membrane8.63E-04
8GO:0045273: respiratory chain complex II1.16E-03
9GO:0009514: glyoxysome1.32E-03
10GO:0005779: integral component of peroxisomal membrane1.32E-03
11GO:0005774: vacuolar membrane2.57E-03
12GO:0005758: mitochondrial intermembrane space3.26E-03
13GO:0070469: respiratory chain3.49E-03
14GO:0005773: vacuole5.43E-03
15GO:0016592: mediator complex6.31E-03
16GO:0005778: peroxisomal membrane7.18E-03
17GO:0030529: intracellular ribonucleoprotein complex7.78E-03
18GO:0005788: endoplasmic reticulum lumen8.08E-03
19GO:0005667: transcription factor complex8.40E-03
20GO:0000151: ubiquitin ligase complex9.36E-03
21GO:0005743: mitochondrial inner membrane9.64E-03
22GO:0005886: plasma membrane1.02E-02
23GO:0005829: cytosol1.21E-02
24GO:0090406: pollen tube1.32E-02
25GO:0005794: Golgi apparatus1.58E-02
26GO:0005737: cytoplasm2.42E-02
27GO:0009570: chloroplast stroma2.62E-02
28GO:0005783: endoplasmic reticulum2.88E-02
29GO:0005802: trans-Golgi network2.96E-02
30GO:0005768: endosome3.36E-02
31GO:0009507: chloroplast3.80E-02
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Gene type



Gene DE type