Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G04920

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090400: stress-induced premature senescence0.00E+00
2GO:0080149: sucrose induced translational repression0.00E+00
3GO:0018063: cytochrome c-heme linkage0.00E+00
4GO:1900384: regulation of flavonol biosynthetic process0.00E+00
5GO:1904250: positive regulation of age-related resistance0.00E+00
6GO:0072722: response to amitrole0.00E+00
7GO:0010150: leaf senescence6.80E-05
8GO:0009636: response to toxic substance8.62E-05
9GO:0006623: protein targeting to vacuole1.43E-04
10GO:0016559: peroxisome fission1.51E-04
11GO:0015854: guanine transport1.88E-04
12GO:0010230: alternative respiration1.88E-04
13GO:0042964: thioredoxin reduction1.88E-04
14GO:0010482: regulation of epidermal cell division1.88E-04
15GO:0006680: glucosylceramide catabolic process1.88E-04
16GO:0015853: adenine transport1.88E-04
17GO:0009688: abscisic acid biosynthetic process3.21E-04
18GO:0006886: intracellular protein transport3.86E-04
19GO:0018315: molybdenum incorporation into molybdenum-molybdopterin complex4.24E-04
20GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine4.24E-04
21GO:0015709: thiosulfate transport4.24E-04
22GO:0071422: succinate transmembrane transport4.24E-04
23GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.24E-04
24GO:0015031: protein transport6.13E-04
25GO:0044375: regulation of peroxisome size6.92E-04
26GO:0072661: protein targeting to plasma membrane6.92E-04
27GO:0010272: response to silver ion6.92E-04
28GO:0051091: positive regulation of sequence-specific DNA binding transcription factor activity6.92E-04
29GO:0001676: long-chain fatty acid metabolic process9.86E-04
30GO:0015729: oxaloacetate transport9.86E-04
31GO:0033356: UDP-L-arabinose metabolic process1.31E-03
32GO:0051567: histone H3-K9 methylation1.31E-03
33GO:0010188: response to microbial phytotoxin1.31E-03
34GO:1902584: positive regulation of response to water deprivation1.31E-03
35GO:0006662: glycerol ether metabolic process1.46E-03
36GO:0071423: malate transmembrane transport1.66E-03
37GO:0046283: anthocyanin-containing compound metabolic process1.66E-03
38GO:0097428: protein maturation by iron-sulfur cluster transfer1.66E-03
39GO:0045927: positive regulation of growth1.66E-03
40GO:0009651: response to salt stress1.71E-03
41GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.05E-03
42GO:0035435: phosphate ion transmembrane transport2.05E-03
43GO:0006014: D-ribose metabolic process2.05E-03
44GO:0006777: Mo-molybdopterin cofactor biosynthetic process2.05E-03
45GO:0034389: lipid particle organization2.46E-03
46GO:0017148: negative regulation of translation2.46E-03
47GO:0009627: systemic acquired resistance2.88E-03
48GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.90E-03
49GO:0071669: plant-type cell wall organization or biogenesis2.90E-03
50GO:0008272: sulfate transport2.90E-03
51GO:0050829: defense response to Gram-negative bacterium2.90E-03
52GO:1900057: positive regulation of leaf senescence2.90E-03
53GO:1902074: response to salt2.90E-03
54GO:0080186: developmental vegetative growth2.90E-03
55GO:0006888: ER to Golgi vesicle-mediated transport3.04E-03
56GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.36E-03
57GO:0043068: positive regulation of programmed cell death3.36E-03
58GO:0006605: protein targeting3.36E-03
59GO:0045010: actin nucleation3.36E-03
60GO:0006102: isocitrate metabolic process3.36E-03
61GO:0009407: toxin catabolic process3.71E-03
62GO:0019430: removal of superoxide radicals3.84E-03
63GO:0017004: cytochrome complex assembly3.84E-03
64GO:0006002: fructose 6-phosphate metabolic process3.84E-03
65GO:0010112: regulation of systemic acquired resistance4.35E-03
66GO:0000902: cell morphogenesis4.35E-03
67GO:0009835: fruit ripening4.35E-03
68GO:0034599: cellular response to oxidative stress4.45E-03
69GO:0006099: tricarboxylic acid cycle4.45E-03
70GO:0007275: multicellular organism development5.18E-03
71GO:0000103: sulfate assimilation5.42E-03
72GO:0006032: chitin catabolic process5.42E-03
73GO:0016441: posttranscriptional gene silencing5.42E-03
74GO:0051707: response to other organism5.48E-03
75GO:0000272: polysaccharide catabolic process5.99E-03
76GO:0048765: root hair cell differentiation5.99E-03
77GO:0045037: protein import into chloroplast stroma6.58E-03
78GO:0006890: retrograde vesicle-mediated transport, Golgi to ER6.58E-03
79GO:0000266: mitochondrial fission6.58E-03
80GO:0010102: lateral root morphogenesis7.19E-03
81GO:0016192: vesicle-mediated transport7.71E-03
82GO:0007015: actin filament organization7.82E-03
83GO:0006417: regulation of translation8.18E-03
84GO:0009825: multidimensional cell growth8.47E-03
85GO:0010053: root epidermal cell differentiation8.47E-03
86GO:0007031: peroxisome organization8.47E-03
87GO:0045454: cell redox homeostasis9.09E-03
88GO:0006863: purine nucleobase transport9.14E-03
89GO:0000162: tryptophan biosynthetic process9.14E-03
90GO:0009620: response to fungus9.60E-03
91GO:0006874: cellular calcium ion homeostasis1.05E-02
92GO:0010026: trichome differentiation1.05E-02
93GO:0051302: regulation of cell division1.05E-02
94GO:0046686: response to cadmium ion1.09E-02
95GO:0016998: cell wall macromolecule catabolic process1.13E-02
96GO:0019915: lipid storage1.13E-02
97GO:0007005: mitochondrion organization1.20E-02
98GO:0042147: retrograde transport, endosome to Golgi1.43E-02
99GO:0010118: stomatal movement1.51E-02
100GO:0010182: sugar mediated signaling pathway1.60E-02
101GO:0019252: starch biosynthetic process1.77E-02
102GO:0009851: auxin biosynthetic process1.77E-02
103GO:0006979: response to oxidative stress1.80E-02
104GO:0010193: response to ozone1.85E-02
105GO:0006891: intra-Golgi vesicle-mediated transport1.85E-02
106GO:0051607: defense response to virus2.31E-02
107GO:0009615: response to virus2.41E-02
108GO:0010029: regulation of seed germination2.51E-02
109GO:0006906: vesicle fusion2.61E-02
110GO:0006974: cellular response to DNA damage stimulus2.61E-02
111GO:0016049: cell growth2.81E-02
112GO:0009817: defense response to fungus, incompatible interaction2.91E-02
113GO:0030244: cellulose biosynthetic process2.91E-02
114GO:0009832: plant-type cell wall biogenesis3.02E-02
115GO:0006970: response to osmotic stress3.04E-02
116GO:0006499: N-terminal protein myristoylation3.12E-02
117GO:0048527: lateral root development3.23E-02
118GO:0010043: response to zinc ion3.23E-02
119GO:0055114: oxidation-reduction process3.40E-02
120GO:0006839: mitochondrial transport3.78E-02
121GO:0006887: exocytosis3.89E-02
122GO:0006631: fatty acid metabolic process3.89E-02
123GO:0042542: response to hydrogen peroxide4.01E-02
124GO:0009744: response to sucrose4.13E-02
125GO:0009965: leaf morphogenesis4.48E-02
126GO:0009846: pollen germination4.85E-02
RankGO TermAdjusted P value
1GO:0070401: NADP+ binding0.00E+00
2GO:0102867: molybdenum cofactor sulfurtransferase activity0.00E+00
3GO:0016229: steroid dehydrogenase activity0.00E+00
4GO:0004791: thioredoxin-disulfide reductase activity1.29E-04
5GO:0004033: aldo-keto reductase (NADP) activity1.51E-04
6GO:0030942: endoplasmic reticulum signal peptide binding1.88E-04
7GO:0004348: glucosylceramidase activity1.88E-04
8GO:0009000: selenocysteine lyase activity1.88E-04
9GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity1.88E-04
10GO:0004649: poly(ADP-ribose) glycohydrolase activity1.88E-04
11GO:0004425: indole-3-glycerol-phosphate synthase activity1.88E-04
12GO:0052691: UDP-arabinopyranose mutase activity4.24E-04
13GO:0015117: thiosulfate transmembrane transporter activity4.24E-04
14GO:1901677: phosphate transmembrane transporter activity4.24E-04
15GO:0015141: succinate transmembrane transporter activity6.92E-04
16GO:0008265: Mo-molybdopterin cofactor sulfurase activity6.92E-04
17GO:0043169: cation binding6.92E-04
18GO:0005310: dicarboxylic acid transmembrane transporter activity6.92E-04
19GO:0004449: isocitrate dehydrogenase (NAD+) activity9.86E-04
20GO:0008106: alcohol dehydrogenase (NADP+) activity9.86E-04
21GO:0015131: oxaloacetate transmembrane transporter activity9.86E-04
22GO:0035529: NADH pyrophosphatase activity9.86E-04
23GO:0016656: monodehydroascorbate reductase (NADH) activity9.86E-04
24GO:0017077: oxidative phosphorylation uncoupler activity9.86E-04
25GO:0047134: protein-disulfide reductase activity1.26E-03
26GO:0016866: intramolecular transferase activity1.31E-03
27GO:0004031: aldehyde oxidase activity1.31E-03
28GO:0050302: indole-3-acetaldehyde oxidase activity1.31E-03
29GO:0015035: protein disulfide oxidoreductase activity1.64E-03
30GO:0047631: ADP-ribose diphosphatase activity1.66E-03
31GO:0030151: molybdenum ion binding1.66E-03
32GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.04E-03
33GO:0000210: NAD+ diphosphatase activity2.05E-03
34GO:0102391: decanoate--CoA ligase activity2.46E-03
35GO:0004747: ribokinase activity2.46E-03
36GO:0004656: procollagen-proline 4-dioxygenase activity2.46E-03
37GO:0003872: 6-phosphofructokinase activity2.90E-03
38GO:0015140: malate transmembrane transporter activity2.90E-03
39GO:0008320: protein transmembrane transporter activity2.90E-03
40GO:0004467: long-chain fatty acid-CoA ligase activity2.90E-03
41GO:0008865: fructokinase activity3.36E-03
42GO:0052747: sinapyl alcohol dehydrogenase activity3.36E-03
43GO:0008312: 7S RNA binding3.36E-03
44GO:0004364: glutathione transferase activity5.26E-03
45GO:0004568: chitinase activity5.42E-03
46GO:0005198: structural molecule activity6.15E-03
47GO:0045551: cinnamyl-alcohol dehydrogenase activity6.58E-03
48GO:0015116: sulfate transmembrane transporter activity6.58E-03
49GO:0050660: flavin adenine dinucleotide binding6.61E-03
50GO:0031072: heat shock protein binding7.19E-03
51GO:0005217: intracellular ligand-gated ion channel activity8.47E-03
52GO:0008061: chitin binding8.47E-03
53GO:0004970: ionotropic glutamate receptor activity8.47E-03
54GO:0051536: iron-sulfur cluster binding9.83E-03
55GO:0031418: L-ascorbic acid binding9.83E-03
56GO:0022857: transmembrane transporter activity9.91E-03
57GO:0005345: purine nucleobase transmembrane transporter activity1.05E-02
58GO:0016760: cellulose synthase (UDP-forming) activity1.28E-02
59GO:0004499: N,N-dimethylaniline monooxygenase activity1.35E-02
60GO:0005102: receptor binding1.43E-02
61GO:0005509: calcium ion binding1.57E-02
62GO:0004518: nuclease activity1.94E-02
63GO:0016887: ATPase activity2.07E-02
64GO:0004806: triglyceride lipase activity2.71E-02
65GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.91E-02
66GO:0016614: oxidoreductase activity, acting on CH-OH group of donors3.23E-02
67GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.45E-02
68GO:0003746: translation elongation factor activity3.45E-02
69GO:0000149: SNARE binding3.67E-02
70GO:0004712: protein serine/threonine/tyrosine kinase activity3.67E-02
71GO:0042393: histone binding3.78E-02
72GO:0050661: NADP binding3.78E-02
73GO:0005484: SNAP receptor activity4.13E-02
74GO:0051537: 2 iron, 2 sulfur cluster binding4.36E-02
75GO:0051287: NAD binding4.73E-02
RankGO TermAdjusted P value
1GO:0005789: endoplasmic reticulum membrane5.29E-05
2GO:0045252: oxoglutarate dehydrogenase complex1.88E-04
3GO:0000138: Golgi trans cisterna1.88E-04
4GO:0017119: Golgi transport complex3.21E-04
5GO:0005794: Golgi apparatus6.17E-04
6GO:0030130: clathrin coat of trans-Golgi network vesicle6.92E-04
7GO:0030132: clathrin coat of coated pit6.92E-04
8GO:0042406: extrinsic component of endoplasmic reticulum membrane6.92E-04
9GO:0030658: transport vesicle membrane9.86E-04
10GO:0005945: 6-phosphofructokinase complex1.66E-03
11GO:0005829: cytosol2.18E-03
12GO:0005778: peroxisomal membrane2.30E-03
13GO:0005885: Arp2/3 protein complex2.46E-03
14GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane2.90E-03
15GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.84E-03
16GO:0005811: lipid particle3.84E-03
17GO:0005779: integral component of peroxisomal membrane3.84E-03
18GO:0031901: early endosome membrane4.35E-03
19GO:0030665: clathrin-coated vesicle membrane4.87E-03
20GO:0008540: proteasome regulatory particle, base subcomplex4.87E-03
21GO:0031902: late endosome membrane5.05E-03
22GO:0005795: Golgi stack8.47E-03
23GO:0000139: Golgi membrane8.51E-03
24GO:0005741: mitochondrial outer membrane1.13E-02
25GO:0031225: anchored component of membrane1.20E-02
26GO:0005744: mitochondrial inner membrane presequence translocase complex1.35E-02
27GO:0005768: endosome1.51E-02
28GO:0009504: cell plate1.77E-02
29GO:0031965: nuclear membrane1.77E-02
30GO:0019898: extrinsic component of membrane1.77E-02
31GO:0016592: mediator complex1.94E-02
32GO:0016021: integral component of membrane1.95E-02
33GO:0071944: cell periphery2.03E-02
34GO:0032580: Golgi cisterna membrane2.13E-02
35GO:0005886: plasma membrane2.47E-02
36GO:0005777: peroxisome2.91E-02
37GO:0080008: Cul4-RING E3 ubiquitin ligase complex3.10E-02
38GO:0031201: SNARE complex3.89E-02
39GO:0005802: trans-Golgi network4.39E-02
40GO:0005743: mitochondrial inner membrane4.79E-02
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Gene type



Gene DE type