GO Enrichment Analysis of Co-expressed Genes with
AT5G04900
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
3 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
4 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
5 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
6 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
7 | GO:0009773: photosynthetic electron transport in photosystem I | 2.23E-05 |
8 | GO:0015995: chlorophyll biosynthetic process | 4.57E-05 |
9 | GO:0015979: photosynthesis | 1.21E-04 |
10 | GO:1901259: chloroplast rRNA processing | 1.34E-04 |
11 | GO:0006353: DNA-templated transcription, termination | 2.25E-04 |
12 | GO:0009090: homoserine biosynthetic process | 2.46E-04 |
13 | GO:1905039: carboxylic acid transmembrane transport | 2.46E-04 |
14 | GO:1905200: gibberellic acid transmembrane transport | 2.46E-04 |
15 | GO:0019276: UDP-N-acetylgalactosamine metabolic process | 2.46E-04 |
16 | GO:0010028: xanthophyll cycle | 2.46E-04 |
17 | GO:0034337: RNA folding | 2.46E-04 |
18 | GO:0000023: maltose metabolic process | 2.46E-04 |
19 | GO:0006047: UDP-N-acetylglucosamine metabolic process | 2.46E-04 |
20 | GO:0000025: maltose catabolic process | 2.46E-04 |
21 | GO:0080112: seed growth | 2.46E-04 |
22 | GO:0005980: glycogen catabolic process | 2.46E-04 |
23 | GO:0055114: oxidation-reduction process | 3.60E-04 |
24 | GO:0005982: starch metabolic process | 3.99E-04 |
25 | GO:0006898: receptor-mediated endocytosis | 5.44E-04 |
26 | GO:0005976: polysaccharide metabolic process | 5.44E-04 |
27 | GO:0010353: response to trehalose | 5.44E-04 |
28 | GO:0016122: xanthophyll metabolic process | 5.44E-04 |
29 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.44E-04 |
30 | GO:0015804: neutral amino acid transport | 5.44E-04 |
31 | GO:0080029: cellular response to boron-containing substance levels | 5.44E-04 |
32 | GO:0005983: starch catabolic process | 6.18E-04 |
33 | GO:0006094: gluconeogenesis | 7.00E-04 |
34 | GO:0010207: photosystem II assembly | 7.88E-04 |
35 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 8.83E-04 |
36 | GO:0006518: peptide metabolic process | 8.83E-04 |
37 | GO:0006696: ergosterol biosynthetic process | 8.83E-04 |
38 | GO:0006000: fructose metabolic process | 8.83E-04 |
39 | GO:0006636: unsaturated fatty acid biosynthetic process | 9.77E-04 |
40 | GO:0010114: response to red light | 1.12E-03 |
41 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.19E-03 |
42 | GO:0046713: borate transport | 1.26E-03 |
43 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.26E-03 |
44 | GO:0009067: aspartate family amino acid biosynthetic process | 1.26E-03 |
45 | GO:1902358: sulfate transmembrane transport | 1.26E-03 |
46 | GO:0045338: farnesyl diphosphate metabolic process | 1.26E-03 |
47 | GO:0006020: inositol metabolic process | 1.26E-03 |
48 | GO:0009152: purine ribonucleotide biosynthetic process | 1.26E-03 |
49 | GO:0010601: positive regulation of auxin biosynthetic process | 1.26E-03 |
50 | GO:0046653: tetrahydrofolate metabolic process | 1.26E-03 |
51 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.26E-03 |
52 | GO:0006021: inositol biosynthetic process | 1.68E-03 |
53 | GO:0071483: cellular response to blue light | 1.68E-03 |
54 | GO:0010021: amylopectin biosynthetic process | 1.68E-03 |
55 | GO:0009765: photosynthesis, light harvesting | 1.68E-03 |
56 | GO:0006109: regulation of carbohydrate metabolic process | 1.68E-03 |
57 | GO:0015994: chlorophyll metabolic process | 1.68E-03 |
58 | GO:0006662: glycerol ether metabolic process | 2.12E-03 |
59 | GO:0006656: phosphatidylcholine biosynthetic process | 2.15E-03 |
60 | GO:0006564: L-serine biosynthetic process | 2.15E-03 |
61 | GO:0009904: chloroplast accumulation movement | 2.15E-03 |
62 | GO:0019252: starch biosynthetic process | 2.44E-03 |
63 | GO:1902456: regulation of stomatal opening | 2.65E-03 |
64 | GO:0010190: cytochrome b6f complex assembly | 2.65E-03 |
65 | GO:0046855: inositol phosphate dephosphorylation | 2.65E-03 |
66 | GO:0009643: photosynthetic acclimation | 2.65E-03 |
67 | GO:0042549: photosystem II stabilization | 2.65E-03 |
68 | GO:0032502: developmental process | 2.78E-03 |
69 | GO:1901657: glycosyl compound metabolic process | 2.97E-03 |
70 | GO:0009903: chloroplast avoidance movement | 3.18E-03 |
71 | GO:0009088: threonine biosynthetic process | 3.18E-03 |
72 | GO:0009955: adaxial/abaxial pattern specification | 3.18E-03 |
73 | GO:0008272: sulfate transport | 3.75E-03 |
74 | GO:0009769: photosynthesis, light harvesting in photosystem II | 3.75E-03 |
75 | GO:0009645: response to low light intensity stimulus | 3.75E-03 |
76 | GO:0009610: response to symbiotic fungus | 3.75E-03 |
77 | GO:0009772: photosynthetic electron transport in photosystem II | 3.75E-03 |
78 | GO:0048437: floral organ development | 3.75E-03 |
79 | GO:0010196: nonphotochemical quenching | 3.75E-03 |
80 | GO:0016126: sterol biosynthetic process | 3.76E-03 |
81 | GO:0030091: protein repair | 4.35E-03 |
82 | GO:0042255: ribosome assembly | 4.35E-03 |
83 | GO:0052543: callose deposition in cell wall | 4.35E-03 |
84 | GO:0005978: glycogen biosynthetic process | 4.35E-03 |
85 | GO:0009642: response to light intensity | 4.35E-03 |
86 | GO:0009657: plastid organization | 4.98E-03 |
87 | GO:0032544: plastid translation | 4.98E-03 |
88 | GO:0006002: fructose 6-phosphate metabolic process | 4.98E-03 |
89 | GO:0006754: ATP biosynthetic process | 5.65E-03 |
90 | GO:0006098: pentose-phosphate shunt | 5.65E-03 |
91 | GO:0009821: alkaloid biosynthetic process | 5.65E-03 |
92 | GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 6.33E-03 |
93 | GO:0009086: methionine biosynthetic process | 6.33E-03 |
94 | GO:0034599: cellular response to oxidative stress | 6.50E-03 |
95 | GO:0009641: shade avoidance | 7.06E-03 |
96 | GO:0009089: lysine biosynthetic process via diaminopimelate | 7.80E-03 |
97 | GO:0015770: sucrose transport | 7.80E-03 |
98 | GO:0043085: positive regulation of catalytic activity | 7.80E-03 |
99 | GO:0006790: sulfur compound metabolic process | 8.58E-03 |
100 | GO:0030048: actin filament-based movement | 9.38E-03 |
101 | GO:0018107: peptidyl-threonine phosphorylation | 9.38E-03 |
102 | GO:0005986: sucrose biosynthetic process | 9.38E-03 |
103 | GO:0019253: reductive pentose-phosphate cycle | 1.02E-02 |
104 | GO:0007015: actin filament organization | 1.02E-02 |
105 | GO:0010223: secondary shoot formation | 1.02E-02 |
106 | GO:0009266: response to temperature stimulus | 1.02E-02 |
107 | GO:0006813: potassium ion transport | 1.08E-02 |
108 | GO:0005985: sucrose metabolic process | 1.11E-02 |
109 | GO:0046854: phosphatidylinositol phosphorylation | 1.11E-02 |
110 | GO:0009901: anther dehiscence | 1.11E-02 |
111 | GO:0080147: root hair cell development | 1.29E-02 |
112 | GO:0003333: amino acid transmembrane transport | 1.47E-02 |
113 | GO:0051260: protein homooligomerization | 1.47E-02 |
114 | GO:0061077: chaperone-mediated protein folding | 1.47E-02 |
115 | GO:0009269: response to desiccation | 1.47E-02 |
116 | GO:0045454: cell redox homeostasis | 1.48E-02 |
117 | GO:0009553: embryo sac development | 1.50E-02 |
118 | GO:0016226: iron-sulfur cluster assembly | 1.57E-02 |
119 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.57E-02 |
120 | GO:0019748: secondary metabolic process | 1.57E-02 |
121 | GO:0009409: response to cold | 1.65E-02 |
122 | GO:0032259: methylation | 1.82E-02 |
123 | GO:0000413: protein peptidyl-prolyl isomerization | 1.99E-02 |
124 | GO:0009058: biosynthetic process | 2.04E-02 |
125 | GO:0009741: response to brassinosteroid | 2.09E-02 |
126 | GO:0015986: ATP synthesis coupled proton transport | 2.21E-02 |
127 | GO:0009556: microsporogenesis | 2.32E-02 |
128 | GO:0009630: gravitropism | 2.55E-02 |
129 | GO:0006906: vesicle fusion | 3.42E-02 |
130 | GO:0018298: protein-chromophore linkage | 3.82E-02 |
131 | GO:0009813: flavonoid biosynthetic process | 3.96E-02 |
132 | GO:0010218: response to far red light | 4.10E-02 |
133 | GO:0009658: chloroplast organization | 4.13E-02 |
134 | GO:0035556: intracellular signal transduction | 4.20E-02 |
135 | GO:0009631: cold acclimation | 4.24E-02 |
136 | GO:0007568: aging | 4.24E-02 |
137 | GO:0006865: amino acid transport | 4.38E-02 |
138 | GO:0009637: response to blue light | 4.52E-02 |
139 | GO:0009853: photorespiration | 4.52E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0004567: beta-mannosidase activity | 0.00E+00 |
2 | GO:0052667: phosphomethylethanolamine N-methyltransferase activity | 0.00E+00 |
3 | GO:0080082: esculin beta-glucosidase activity | 0.00E+00 |
4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
5 | GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity | 0.00E+00 |
6 | GO:0047668: amygdalin beta-glucosidase activity | 0.00E+00 |
7 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
8 | GO:0080083: beta-gentiobiose beta-glucosidase activity | 0.00E+00 |
9 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
10 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
11 | GO:0004134: 4-alpha-glucanotransferase activity | 2.46E-04 |
12 | GO:0004645: phosphorylase activity | 2.46E-04 |
13 | GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity | 2.46E-04 |
14 | GO:0015168: glycerol transmembrane transporter activity | 2.46E-04 |
15 | GO:0045486: naringenin 3-dioxygenase activity | 2.46E-04 |
16 | GO:0035671: enone reductase activity | 2.46E-04 |
17 | GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity | 2.46E-04 |
18 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 2.46E-04 |
19 | GO:0080079: cellobiose glucosidase activity | 2.46E-04 |
20 | GO:1905201: gibberellin transmembrane transporter activity | 2.46E-04 |
21 | GO:0050521: alpha-glucan, water dikinase activity | 2.46E-04 |
22 | GO:0008184: glycogen phosphorylase activity | 2.46E-04 |
23 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 2.46E-04 |
24 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.44E-04 |
25 | GO:0004412: homoserine dehydrogenase activity | 5.44E-04 |
26 | GO:0008967: phosphoglycolate phosphatase activity | 5.44E-04 |
27 | GO:0019172: glyoxalase III activity | 5.44E-04 |
28 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 5.44E-04 |
29 | GO:0000234: phosphoethanolamine N-methyltransferase activity | 5.44E-04 |
30 | GO:0015172: acidic amino acid transmembrane transporter activity | 5.44E-04 |
31 | GO:0042389: omega-3 fatty acid desaturase activity | 5.44E-04 |
32 | GO:0010297: heteropolysaccharide binding | 5.44E-04 |
33 | GO:0004617: phosphoglycerate dehydrogenase activity | 5.44E-04 |
34 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.44E-04 |
35 | GO:0033201: alpha-1,4-glucan synthase activity | 5.44E-04 |
36 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.44E-04 |
37 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.44E-04 |
38 | GO:0018708: thiol S-methyltransferase activity | 5.44E-04 |
39 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 5.44E-04 |
40 | GO:0004751: ribose-5-phosphate isomerase activity | 8.83E-04 |
41 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 8.83E-04 |
42 | GO:0008864: formyltetrahydrofolate deformylase activity | 8.83E-04 |
43 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 8.83E-04 |
44 | GO:0043169: cation binding | 8.83E-04 |
45 | GO:0004373: glycogen (starch) synthase activity | 8.83E-04 |
46 | GO:0031409: pigment binding | 9.77E-04 |
47 | GO:0016851: magnesium chelatase activity | 1.26E-03 |
48 | GO:0022890: inorganic cation transmembrane transporter activity | 1.26E-03 |
49 | GO:0046715: borate transmembrane transporter activity | 1.26E-03 |
50 | GO:0004072: aspartate kinase activity | 1.26E-03 |
51 | GO:0019201: nucleotide kinase activity | 1.26E-03 |
52 | GO:0015175: neutral amino acid transmembrane transporter activity | 1.26E-03 |
53 | GO:0009011: starch synthase activity | 1.68E-03 |
54 | GO:0015204: urea transmembrane transporter activity | 1.68E-03 |
55 | GO:0003727: single-stranded RNA binding | 1.68E-03 |
56 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.68E-03 |
57 | GO:0047134: protein-disulfide reductase activity | 1.82E-03 |
58 | GO:0004791: thioredoxin-disulfide reductase activity | 2.27E-03 |
59 | GO:0004462: lactoylglutathione lyase activity | 2.65E-03 |
60 | GO:0008200: ion channel inhibitor activity | 2.65E-03 |
61 | GO:2001070: starch binding | 2.65E-03 |
62 | GO:0004332: fructose-bisphosphate aldolase activity | 2.65E-03 |
63 | GO:0004629: phospholipase C activity | 2.65E-03 |
64 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.97E-03 |
65 | GO:0004017: adenylate kinase activity | 3.18E-03 |
66 | GO:0004602: glutathione peroxidase activity | 3.18E-03 |
67 | GO:0004435: phosphatidylinositol phospholipase C activity | 3.18E-03 |
68 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 3.18E-03 |
69 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.18E-03 |
70 | GO:0019843: rRNA binding | 3.40E-03 |
71 | GO:0016597: amino acid binding | 3.55E-03 |
72 | GO:0016168: chlorophyll binding | 3.98E-03 |
73 | GO:0102483: scopolin beta-glucosidase activity | 4.43E-03 |
74 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 4.98E-03 |
75 | GO:0008271: secondary active sulfate transmembrane transporter activity | 4.98E-03 |
76 | GO:0071949: FAD binding | 5.65E-03 |
77 | GO:0016844: strictosidine synthase activity | 6.33E-03 |
78 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 6.33E-03 |
79 | GO:0008422: beta-glucosidase activity | 6.78E-03 |
80 | GO:0030234: enzyme regulator activity | 7.06E-03 |
81 | GO:0008047: enzyme activator activity | 7.06E-03 |
82 | GO:0008515: sucrose transmembrane transporter activity | 7.80E-03 |
83 | GO:0047372: acylglycerol lipase activity | 7.80E-03 |
84 | GO:0015386: potassium:proton antiporter activity | 7.80E-03 |
85 | GO:0015116: sulfate transmembrane transporter activity | 8.58E-03 |
86 | GO:0015293: symporter activity | 9.01E-03 |
87 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.36E-03 |
88 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.38E-03 |
89 | GO:0031072: heat shock protein binding | 9.38E-03 |
90 | GO:0003725: double-stranded RNA binding | 9.38E-03 |
91 | GO:0004535: poly(A)-specific ribonuclease activity | 1.02E-02 |
92 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.02E-02 |
93 | GO:0003774: motor activity | 1.02E-02 |
94 | GO:0051119: sugar transmembrane transporter activity | 1.11E-02 |
95 | GO:0051536: iron-sulfur cluster binding | 1.29E-02 |
96 | GO:0031418: L-ascorbic acid binding | 1.29E-02 |
97 | GO:0004857: enzyme inhibitor activity | 1.29E-02 |
98 | GO:0005528: FK506 binding | 1.29E-02 |
99 | GO:0015079: potassium ion transmembrane transporter activity | 1.38E-02 |
100 | GO:0016779: nucleotidyltransferase activity | 1.57E-02 |
101 | GO:0016491: oxidoreductase activity | 1.57E-02 |
102 | GO:0015035: protein disulfide oxidoreductase activity | 1.59E-02 |
103 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.66E-02 |
104 | GO:0030570: pectate lyase activity | 1.67E-02 |
105 | GO:0003756: protein disulfide isomerase activity | 1.77E-02 |
106 | GO:0004672: protein kinase activity | 1.90E-02 |
107 | GO:0005249: voltage-gated potassium channel activity | 1.99E-02 |
108 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.09E-02 |
109 | GO:0004252: serine-type endopeptidase activity | 2.15E-02 |
110 | GO:0015299: solute:proton antiporter activity | 2.21E-02 |
111 | GO:0048038: quinone binding | 2.43E-02 |
112 | GO:0015250: water channel activity | 3.16E-02 |
113 | GO:0008236: serine-type peptidase activity | 3.69E-02 |
114 | GO:0008168: methyltransferase activity | 3.98E-02 |
115 | GO:0004222: metalloendopeptidase activity | 4.10E-02 |
116 | GO:0003746: translation elongation factor activity | 4.52E-02 |
117 | GO:0003993: acid phosphatase activity | 4.66E-02 |
118 | GO:0000149: SNARE binding | 4.81E-02 |
119 | GO:0050661: NADP binding | 4.96E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0009507: chloroplast | 7.14E-28 |
2 | GO:0009534: chloroplast thylakoid | 7.35E-23 |
3 | GO:0009535: chloroplast thylakoid membrane | 1.21E-16 |
4 | GO:0009570: chloroplast stroma | 4.87E-11 |
5 | GO:0009941: chloroplast envelope | 1.49E-10 |
6 | GO:0031977: thylakoid lumen | 3.40E-07 |
7 | GO:0009579: thylakoid | 7.46E-07 |
8 | GO:0009543: chloroplast thylakoid lumen | 6.39E-06 |
9 | GO:0042651: thylakoid membrane | 8.32E-05 |
10 | GO:0031969: chloroplast membrane | 8.79E-05 |
11 | GO:0009501: amyloplast | 2.25E-04 |
12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.36E-04 |
13 | GO:0010287: plastoglobule | 5.32E-04 |
14 | GO:0030076: light-harvesting complex | 8.79E-04 |
15 | GO:0010007: magnesium chelatase complex | 8.83E-04 |
16 | GO:0008076: voltage-gated potassium channel complex | 1.26E-03 |
17 | GO:0009544: chloroplast ATP synthase complex | 1.68E-03 |
18 | GO:0009517: PSII associated light-harvesting complex II | 1.68E-03 |
19 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.65E-03 |
20 | GO:0009840: chloroplastic endopeptidase Clp complex | 3.18E-03 |
21 | GO:0010319: stromule | 3.35E-03 |
22 | GO:0031982: vesicle | 4.35E-03 |
23 | GO:0031901: early endosome membrane | 5.65E-03 |
24 | GO:0005763: mitochondrial small ribosomal subunit | 5.65E-03 |
25 | GO:0016459: myosin complex | 7.06E-03 |
26 | GO:0032040: small-subunit processome | 8.58E-03 |
27 | GO:0009508: plastid chromosome | 9.38E-03 |
28 | GO:0030095: chloroplast photosystem II | 1.02E-02 |
29 | GO:0009654: photosystem II oxygen evolving complex | 1.38E-02 |
30 | GO:0009532: plastid stroma | 1.47E-02 |
31 | GO:0015935: small ribosomal subunit | 1.47E-02 |
32 | GO:0005623: cell | 1.99E-02 |
33 | GO:0009522: photosystem I | 2.21E-02 |
34 | GO:0009523: photosystem II | 2.32E-02 |
35 | GO:0019898: extrinsic component of membrane | 2.32E-02 |
36 | GO:0005887: integral component of plasma membrane | 2.82E-02 |
37 | GO:0009295: nucleoid | 2.91E-02 |