co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G04720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002376: immune system process	0.00E+00
2	GO:0010324: membrane invagination	0.00E+00
3	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
4	GO:1902001: fatty acid transmembrane transport	0.00E+00
5	GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance	0.00E+00
6	GO:1900067: regulation of cellular response to alkaline pH	0.00E+00
7	GO:0090359: negative regulation of abscisic acid biosynthetic process	0.00E+00
8	GO:0015690: aluminum cation transport	0.00E+00
9	GO:0006979: response to oxidative stress	1.43E-06
10	GO:0006952: defense response	4.48E-06
11	GO:0010112: regulation of systemic acquired resistance	2.13E-05
12	GO:0042391: regulation of membrane potential	2.22E-05
13	GO:0009611: response to wounding	2.25E-05
14	GO:0010200: response to chitin	4.69E-05
15	GO:1903507: negative regulation of nucleic acid-templated transcription	4.72E-05
16	GO:0060548: negative regulation of cell death	7.23E-05
17	GO:0006468: protein phosphorylation	1.03E-04
18	GO:0009164: nucleoside catabolic process	1.13E-04
19	GO:0009643: photosynthetic acclimation	1.63E-04
20	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.15E-04
21	GO:0071456: cellular response to hypoxia	2.15E-04
22	GO:0009625: response to insect	2.43E-04
23	GO:0080167: response to karrikin	2.63E-04
24	GO:0009700: indole phytoalexin biosynthetic process	3.40E-04
25	GO:0034214: protein hexamerization	3.40E-04
26	GO:0009270: response to humidity	3.40E-04
27	GO:0048508: embryonic meristem development	3.40E-04
28	GO:0015760: glucose-6-phosphate transport	3.40E-04
29	GO:0019567: arabinose biosynthetic process	3.40E-04
30	GO:0080173: male-female gamete recognition during double fertilization	3.40E-04
31	GO:0033306: phytol metabolic process	3.40E-04
32	GO:0030091: protein repair	3.64E-04
33	GO:0010150: leaf senescence	3.80E-04
34	GO:0009646: response to absence of light	4.11E-04
35	GO:0031347: regulation of defense response	4.15E-04
36	GO:0010120: camalexin biosynthetic process	4.45E-04
37	GO:0007166: cell surface receptor signaling pathway	4.86E-04
38	GO:0010193: response to ozone	4.92E-04
39	GO:0006098: pentose-phosphate shunt	5.35E-04
40	GO:0009753: response to jasmonic acid	6.85E-04
41	GO:0015908: fatty acid transport	7.40E-04
42	GO:0044419: interspecies interaction between organisms	7.40E-04
43	GO:0009945: radial axis specification	7.40E-04
44	GO:0015712: hexose phosphate transport	7.40E-04
45	GO:0010115: regulation of abscisic acid biosynthetic process	7.40E-04
46	GO:0051258: protein polymerization	7.40E-04
47	GO:0010271: regulation of chlorophyll catabolic process	7.40E-04
48	GO:0019725: cellular homeostasis	7.40E-04
49	GO:0071668: plant-type cell wall assembly	7.40E-04
50	GO:0009446: putrescine biosynthetic process	7.40E-04
51	GO:0015914: phospholipid transport	7.40E-04
52	GO:0009838: abscission	7.40E-04
53	GO:0006527: arginine catabolic process	7.40E-04
54	GO:0080181: lateral root branching	7.40E-04
55	GO:0055088: lipid homeostasis	7.40E-04
56	GO:0019521: D-gluconate metabolic process	7.40E-04
57	GO:0015714: phosphoenolpyruvate transport	1.20E-03
58	GO:1900055: regulation of leaf senescence	1.20E-03
59	GO:0006954: inflammatory response	1.20E-03
60	GO:0034051: negative regulation of plant-type hypersensitive response	1.20E-03
61	GO:1900140: regulation of seedling development	1.20E-03
62	GO:0035436: triose phosphate transmembrane transport	1.20E-03
63	GO:0045793: positive regulation of cell size	1.20E-03
64	GO:0010186: positive regulation of cellular defense response	1.20E-03
65	GO:0015695: organic cation transport	1.20E-03
66	GO:0009266: response to temperature stimulus	1.23E-03
67	GO:0050832: defense response to fungus	1.45E-03
68	GO:0009867: jasmonic acid mediated signaling pathway	1.47E-03
69	GO:0009737: response to abscisic acid	1.64E-03
70	GO:2000377: regulation of reactive oxygen species metabolic process	1.70E-03
71	GO:0015696: ammonium transport	1.72E-03
72	GO:0051289: protein homotetramerization	1.72E-03
73	GO:0046836: glycolipid transport	1.72E-03
74	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.72E-03
75	GO:0048194: Golgi vesicle budding	1.72E-03
76	GO:0051707: response to other organism	2.03E-03
77	GO:0015713: phosphoglycerate transport	2.31E-03
78	GO:0008295: spermidine biosynthetic process	2.31E-03
79	GO:0034440: lipid oxidation	2.31E-03
80	GO:1901141: regulation of lignin biosynthetic process	2.31E-03
81	GO:0010109: regulation of photosynthesis	2.31E-03
82	GO:0045227: capsule polysaccharide biosynthetic process	2.31E-03
83	GO:0010483: pollen tube reception	2.31E-03
84	GO:0048638: regulation of developmental growth	2.31E-03
85	GO:0009652: thigmotropism	2.31E-03
86	GO:0072488: ammonium transmembrane transport	2.31E-03
87	GO:0033358: UDP-L-arabinose biosynthetic process	2.31E-03
88	GO:0042742: defense response to bacterium	2.40E-03
89	GO:0009697: salicylic acid biosynthetic process	2.96E-03
90	GO:0034052: positive regulation of plant-type hypersensitive response	2.96E-03
91	GO:0006828: manganese ion transport	3.65E-03
92	GO:0006596: polyamine biosynthetic process	3.65E-03
93	GO:0009117: nucleotide metabolic process	3.65E-03
94	GO:0006574: valine catabolic process	3.65E-03
95	GO:0009759: indole glucosinolate biosynthetic process	3.65E-03
96	GO:0015691: cadmium ion transport	3.65E-03
97	GO:0009626: plant-type hypersensitive response	3.99E-03
98	GO:0009094: L-phenylalanine biosynthetic process	4.40E-03
99	GO:0042372: phylloquinone biosynthetic process	4.40E-03
100	GO:0009612: response to mechanical stimulus	4.40E-03
101	GO:0009942: longitudinal axis specification	4.40E-03
102	GO:0080086: stamen filament development	4.40E-03
103	GO:0009624: response to nematode	4.66E-03
104	GO:0050829: defense response to Gram-negative bacterium	5.19E-03
105	GO:1902074: response to salt	5.19E-03
106	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	5.19E-03
107	GO:0043090: amino acid import	5.19E-03
108	GO:0071446: cellular response to salicylic acid stimulus	5.19E-03
109	GO:1900056: negative regulation of leaf senescence	5.19E-03
110	GO:0043068: positive regulation of programmed cell death	6.03E-03
111	GO:0009787: regulation of abscisic acid-activated signaling pathway	6.03E-03
112	GO:0009819: drought recovery	6.03E-03
113	GO:0010204: defense response signaling pathway, resistance gene-independent	6.92E-03
114	GO:0030968: endoplasmic reticulum unfolded protein response	6.92E-03
115	GO:2000031: regulation of salicylic acid mediated signaling pathway	6.92E-03
116	GO:0010208: pollen wall assembly	6.92E-03
117	GO:0006950: response to stress	7.10E-03
118	GO:0019432: triglyceride biosynthetic process	7.85E-03
119	GO:0046916: cellular transition metal ion homeostasis	7.85E-03
120	GO:0009056: catabolic process	7.85E-03
121	GO:0009407: toxin catabolic process	8.69E-03
122	GO:0010380: regulation of chlorophyll biosynthetic process	8.82E-03
123	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.82E-03
124	GO:0048268: clathrin coat assembly	8.82E-03
125	GO:0010119: regulation of stomatal movement	9.11E-03
126	GO:0007568: aging	9.11E-03
127	GO:0009751: response to salicylic acid	9.20E-03
128	GO:0019538: protein metabolic process	9.84E-03
129	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.84E-03
130	GO:0006032: chitin catabolic process	9.84E-03
131	GO:0072593: reactive oxygen species metabolic process	1.09E-02
132	GO:0048229: gametophyte development	1.09E-02
133	GO:0006816: calcium ion transport	1.09E-02
134	GO:0030001: metal ion transport	1.14E-02
135	GO:0009617: response to bacterium	1.17E-02
136	GO:0006897: endocytosis	1.19E-02
137	GO:0012501: programmed cell death	1.20E-02
138	GO:0009636: response to toxic substance	1.45E-02
139	GO:0009225: nucleotide-sugar metabolic process	1.55E-02
140	GO:0009901: anther dehiscence	1.55E-02
141	GO:0009695: jasmonic acid biosynthetic process	1.93E-02
142	GO:0006874: cellular calcium ion homeostasis	1.93E-02
143	GO:0031408: oxylipin biosynthetic process	2.07E-02
144	GO:0016998: cell wall macromolecule catabolic process	2.07E-02
145	GO:0009414: response to water deprivation	2.13E-02
146	GO:0031348: negative regulation of defense response	2.21E-02
147	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.24E-02
148	GO:0040007: growth	2.35E-02
149	GO:0006012: galactose metabolic process	2.35E-02
150	GO:0016567: protein ubiquitination	2.58E-02
151	GO:0070417: cellular response to cold	2.64E-02
152	GO:0000271: polysaccharide biosynthetic process	2.79E-02
153	GO:0000413: protein peptidyl-prolyl isomerization	2.79E-02
154	GO:0048653: anther development	2.79E-02
155	GO:0042631: cellular response to water deprivation	2.79E-02
156	GO:0006885: regulation of pH	2.94E-02
157	GO:0010197: polar nucleus fusion	2.94E-02
158	GO:0045489: pectin biosynthetic process	2.94E-02
159	GO:0007165: signal transduction	3.02E-02
160	GO:0009749: response to glucose	3.25E-02
161	GO:0008654: phospholipid biosynthetic process	3.25E-02
162	GO:0006623: protein targeting to vacuole	3.25E-02
163	GO:0000302: response to reactive oxygen species	3.42E-02
164	GO:0009408: response to heat	3.49E-02
165	GO:0055114: oxidation-reduction process	3.50E-02
166	GO:0019761: glucosinolate biosynthetic process	3.58E-02
167	GO:0009790: embryo development	3.63E-02
168	GO:0009409: response to cold	3.68E-02
169	GO:0006904: vesicle docking involved in exocytosis	4.09E-02
170	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.62E-02
171	GO:0009627: systemic acquired resistance	4.80E-02
172	GO:0006470: protein dephosphorylation	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0004168: dolichol kinase activity	0.00E+00
3	GO:0030552: cAMP binding	3.61E-06
4	GO:0030553: cGMP binding	3.61E-06
5	GO:0005216: ion channel activity	7.32E-06
6	GO:0005249: voltage-gated potassium channel activity	2.22E-05
7	GO:0030551: cyclic nucleotide binding	2.22E-05
8	GO:0016301: kinase activity	2.96E-05
9	GO:0004674: protein serine/threonine kinase activity	3.76E-05
10	GO:0003714: transcription corepressor activity	1.43E-04
11	GO:0004012: phospholipid-translocating ATPase activity	2.22E-04
12	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.22E-04
13	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.22E-04
14	GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	2.22E-04
15	GO:0019707: protein-cysteine S-acyltransferase activity	3.40E-04
16	GO:2001147: camalexin binding	3.40E-04
17	GO:0008792: arginine decarboxylase activity	3.40E-04
18	GO:0015245: fatty acid transporter activity	3.40E-04
19	GO:2001227: quercitrin binding	3.40E-04
20	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.64E-04
21	GO:0019901: protein kinase binding	4.50E-04
22	GO:0005509: calcium ion binding	6.19E-04
23	GO:0001671: ATPase activator activity	7.40E-04
24	GO:0004385: guanylate kinase activity	7.40E-04
25	GO:0047364: desulfoglucosinolate sulfotransferase activity	7.40E-04
26	GO:0015152: glucose-6-phosphate transmembrane transporter activity	7.40E-04
27	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.10E-03
28	GO:0016165: linoleate 13S-lipoxygenase activity	1.20E-03
29	GO:0071917: triose-phosphate transmembrane transporter activity	1.20E-03
30	GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity	1.20E-03
31	GO:0005516: calmodulin binding	1.25E-03
32	GO:0017089: glycolipid transporter activity	1.72E-03
33	GO:0005524: ATP binding	2.05E-03
34	GO:0009916: alternative oxidase activity	2.31E-03
35	GO:0015120: phosphoglycerate transmembrane transporter activity	2.31E-03
36	GO:0015368: calcium:cation antiporter activity	2.31E-03
37	GO:0050373: UDP-arabinose 4-epimerase activity	2.31E-03
38	GO:0047769: arogenate dehydratase activity	2.31E-03
39	GO:0004737: pyruvate decarboxylase activity	2.31E-03
40	GO:0004664: prephenate dehydratase activity	2.31E-03
41	GO:0051861: glycolipid binding	2.31E-03
42	GO:0015369: calcium:proton antiporter activity	2.31E-03
43	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.68E-03
44	GO:0005496: steroid binding	2.96E-03
45	GO:0047631: ADP-ribose diphosphatase activity	2.96E-03
46	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.96E-03
47	GO:0000210: NAD+ diphosphatase activity	3.65E-03
48	GO:0008519: ammonium transmembrane transporter activity	3.65E-03
49	GO:0030976: thiamine pyrophosphate binding	3.65E-03
50	GO:0004605: phosphatidate cytidylyltransferase activity	3.65E-03
51	GO:0003950: NAD+ ADP-ribosyltransferase activity	4.40E-03
52	GO:0005261: cation channel activity	4.40E-03
53	GO:0003978: UDP-glucose 4-epimerase activity	4.40E-03
54	GO:0004144: diacylglycerol O-acyltransferase activity	4.40E-03
55	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.40E-03
56	GO:0043295: glutathione binding	5.19E-03
57	GO:0016831: carboxy-lyase activity	5.19E-03
58	GO:0004497: monooxygenase activity	5.20E-03
59	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	5.37E-03
60	GO:0005544: calcium-dependent phospholipid binding	6.03E-03
61	GO:0004033: aldo-keto reductase (NADP) activity	6.03E-03
62	GO:0071949: FAD binding	7.85E-03
63	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.57E-03
64	GO:0047617: acyl-CoA hydrolase activity	8.82E-03
65	GO:0004568: chitinase activity	9.84E-03
66	GO:0008171: O-methyltransferase activity	9.84E-03
67	GO:0005545: 1-phosphatidylinositol binding	9.84E-03
68	GO:0050661: NADP binding	1.14E-02
69	GO:0004364: glutathione transferase activity	1.24E-02
70	GO:0005315: inorganic phosphate transmembrane transporter activity	1.31E-02
71	GO:0004842: ubiquitin-protein transferase activity	1.40E-02
72	GO:0043565: sequence-specific DNA binding	1.50E-02
73	GO:0008146: sulfotransferase activity	1.55E-02
74	GO:0005217: intracellular ligand-gated ion channel activity	1.55E-02
75	GO:0004970: ionotropic glutamate receptor activity	1.55E-02
76	GO:0004190: aspartic-type endopeptidase activity	1.55E-02
77	GO:0004672: protein kinase activity	1.57E-02
78	GO:0000287: magnesium ion binding	1.60E-02
79	GO:0051087: chaperone binding	1.93E-02
80	GO:0050660: flavin adenine dinucleotide binding	1.96E-02
81	GO:0033612: receptor serine/threonine kinase binding	2.07E-02
82	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.07E-02
83	GO:0004707: MAP kinase activity	2.07E-02
84	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.21E-02
85	GO:0005451: monovalent cation:proton antiporter activity	2.79E-02
86	GO:0005199: structural constituent of cell wall	2.94E-02
87	GO:0030276: clathrin binding	2.94E-02
88	GO:0015299: solute:proton antiporter activity	3.10E-02
89	GO:0016787: hydrolase activity	3.18E-02
90	GO:0030246: carbohydrate binding	3.45E-02
91	GO:0004197: cysteine-type endopeptidase activity	3.58E-02
92	GO:0015385: sodium:proton antiporter activity	3.75E-02
93	GO:0015297: antiporter activity	4.10E-02
94	GO:0016597: amino acid binding	4.26E-02
95	GO:0008375: acetylglucosaminyltransferase activity	4.80E-02
96	GO:0004721: phosphoprotein phosphatase activity	4.98E-02
97	GO:0030247: polysaccharide binding	4.98E-02
98	GO:0004806: triglyceride lipase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005886: plasma membrane	5.35E-12
3	GO:0016021: integral component of membrane	1.01E-06
4	GO:0005901: caveola	5.21E-06
5	GO:0000138: Golgi trans cisterna	3.40E-04
6	GO:0008287: protein serine/threonine phosphatase complex	1.20E-03
7	GO:0009530: primary cell wall	1.20E-03
8	GO:0070062: extracellular exosome	1.72E-03
9	GO:0005887: integral component of plasma membrane	4.11E-03
10	GO:0016363: nuclear matrix	4.40E-03
11	GO:0031012: extracellular matrix	1.31E-02
12	GO:0030176: integral component of endoplasmic reticulum membrane	1.55E-02
13	GO:0005769: early endosome	1.67E-02
14	GO:0070469: respiratory chain	1.93E-02
15	GO:0005905: clathrin-coated pit	2.07E-02
16	GO:0030136: clathrin-coated vesicle	2.64E-02
17	GO:0005777: peroxisome	2.73E-02
18	GO:0005770: late endosome	2.94E-02
19	GO:0000145: exocyst	3.58E-02
20	GO:0032580: Golgi cisterna membrane	3.92E-02
21	GO:0031225: anchored component of membrane	4.27E-02
22	GO:0005802: trans-Golgi network	4.43E-02