GO Enrichment Analysis of Co-expressed Genes with
AT5G04620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043457: regulation of cellular respiration | 0.00E+00 |
| 2 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 3 | GO:0046486: glycerolipid metabolic process | 0.00E+00 |
| 4 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 9.69E-05 |
| 5 | GO:0019478: D-amino acid catabolic process | 9.69E-05 |
| 6 | GO:0043087: regulation of GTPase activity | 9.69E-05 |
| 7 | GO:0006436: tryptophanyl-tRNA aminoacylation | 9.69E-05 |
| 8 | GO:0006177: GMP biosynthetic process | 9.69E-05 |
| 9 | GO:0034757: negative regulation of iron ion transport | 9.69E-05 |
| 10 | GO:0006650: glycerophospholipid metabolic process | 2.28E-04 |
| 11 | GO:0010271: regulation of chlorophyll catabolic process | 2.28E-04 |
| 12 | GO:0046168: glycerol-3-phosphate catabolic process | 3.80E-04 |
| 13 | GO:0080117: secondary growth | 3.80E-04 |
| 14 | GO:0030029: actin filament-based process | 3.80E-04 |
| 15 | GO:0010239: chloroplast mRNA processing | 5.46E-04 |
| 16 | GO:0044211: CTP salvage | 5.46E-04 |
| 17 | GO:0006072: glycerol-3-phosphate metabolic process | 5.46E-04 |
| 18 | GO:0009800: cinnamic acid biosynthetic process | 5.46E-04 |
| 19 | GO:0010306: rhamnogalacturonan II biosynthetic process | 5.46E-04 |
| 20 | GO:2000904: regulation of starch metabolic process | 5.46E-04 |
| 21 | GO:0045017: glycerolipid biosynthetic process | 5.46E-04 |
| 22 | GO:0044206: UMP salvage | 7.26E-04 |
| 23 | GO:0010158: abaxial cell fate specification | 9.17E-04 |
| 24 | GO:0009696: salicylic acid metabolic process | 9.17E-04 |
| 25 | GO:0009451: RNA modification | 1.02E-03 |
| 26 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.12E-03 |
| 27 | GO:0006559: L-phenylalanine catabolic process | 1.12E-03 |
| 28 | GO:0006206: pyrimidine nucleobase metabolic process | 1.12E-03 |
| 29 | GO:0048831: regulation of shoot system development | 1.12E-03 |
| 30 | GO:0009627: systemic acquired resistance | 1.18E-03 |
| 31 | GO:0048509: regulation of meristem development | 1.34E-03 |
| 32 | GO:0030244: cellulose biosynthetic process | 1.37E-03 |
| 33 | GO:0010050: vegetative phase change | 1.57E-03 |
| 34 | GO:0009610: response to symbiotic fungus | 1.57E-03 |
| 35 | GO:0006353: DNA-templated transcription, termination | 1.81E-03 |
| 36 | GO:0009850: auxin metabolic process | 1.81E-03 |
| 37 | GO:0032508: DNA duplex unwinding | 1.81E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 2.07E-03 |
| 39 | GO:0009827: plant-type cell wall modification | 2.07E-03 |
| 40 | GO:0009657: plastid organization | 2.07E-03 |
| 41 | GO:0019430: removal of superoxide radicals | 2.07E-03 |
| 42 | GO:0032544: plastid translation | 2.07E-03 |
| 43 | GO:0046916: cellular transition metal ion homeostasis | 2.33E-03 |
| 44 | GO:0009636: response to toxic substance | 2.48E-03 |
| 45 | GO:0016571: histone methylation | 2.61E-03 |
| 46 | GO:0016573: histone acetylation | 2.61E-03 |
| 47 | GO:0010192: mucilage biosynthetic process | 2.90E-03 |
| 48 | GO:0045037: protein import into chloroplast stroma | 3.50E-03 |
| 49 | GO:0010582: floral meristem determinacy | 3.50E-03 |
| 50 | GO:0010020: chloroplast fission | 4.15E-03 |
| 51 | GO:0009266: response to temperature stimulus | 4.15E-03 |
| 52 | GO:0006863: purine nucleobase transport | 4.83E-03 |
| 53 | GO:0009833: plant-type primary cell wall biogenesis | 4.83E-03 |
| 54 | GO:0030150: protein import into mitochondrial matrix | 5.19E-03 |
| 55 | GO:0006338: chromatin remodeling | 5.19E-03 |
| 56 | GO:0006289: nucleotide-excision repair | 5.19E-03 |
| 57 | GO:0006418: tRNA aminoacylation for protein translation | 5.55E-03 |
| 58 | GO:0009269: response to desiccation | 5.93E-03 |
| 59 | GO:0035428: hexose transmembrane transport | 6.31E-03 |
| 60 | GO:0016226: iron-sulfur cluster assembly | 6.31E-03 |
| 61 | GO:0006633: fatty acid biosynthetic process | 6.59E-03 |
| 62 | GO:0071215: cellular response to abscisic acid stimulus | 6.70E-03 |
| 63 | GO:0048443: stamen development | 7.10E-03 |
| 64 | GO:0016117: carotenoid biosynthetic process | 7.51E-03 |
| 65 | GO:0070417: cellular response to cold | 7.51E-03 |
| 66 | GO:0010087: phloem or xylem histogenesis | 7.93E-03 |
| 67 | GO:0045489: pectin biosynthetic process | 8.35E-03 |
| 68 | GO:0009958: positive gravitropism | 8.35E-03 |
| 69 | GO:0048868: pollen tube development | 8.35E-03 |
| 70 | GO:0046323: glucose import | 8.35E-03 |
| 71 | GO:0008654: phospholipid biosynthetic process | 9.23E-03 |
| 72 | GO:0010583: response to cyclopentenone | 1.01E-02 |
| 73 | GO:0006970: response to osmotic stress | 1.21E-02 |
| 74 | GO:0010029: regulation of seed germination | 1.30E-02 |
| 75 | GO:0009817: defense response to fungus, incompatible interaction | 1.51E-02 |
| 76 | GO:0048481: plant ovule development | 1.51E-02 |
| 77 | GO:0009832: plant-type cell wall biogenesis | 1.57E-02 |
| 78 | GO:0000160: phosphorelay signal transduction system | 1.57E-02 |
| 79 | GO:0009834: plant-type secondary cell wall biogenesis | 1.62E-02 |
| 80 | GO:0009631: cold acclimation | 1.68E-02 |
| 81 | GO:0009910: negative regulation of flower development | 1.68E-02 |
| 82 | GO:0009414: response to water deprivation | 1.81E-02 |
| 83 | GO:0030001: metal ion transport | 1.96E-02 |
| 84 | GO:0008283: cell proliferation | 2.14E-02 |
| 85 | GO:0009965: leaf morphogenesis | 2.33E-02 |
| 86 | GO:0006364: rRNA processing | 2.65E-02 |
| 87 | GO:0009736: cytokinin-activated signaling pathway | 2.65E-02 |
| 88 | GO:0009409: response to cold | 2.73E-02 |
| 89 | GO:0009909: regulation of flower development | 2.85E-02 |
| 90 | GO:0048316: seed development | 3.05E-02 |
| 91 | GO:0005975: carbohydrate metabolic process | 3.14E-02 |
| 92 | GO:0055114: oxidation-reduction process | 3.22E-02 |
| 93 | GO:0016569: covalent chromatin modification | 3.26E-02 |
| 94 | GO:0009058: biosynthetic process | 4.15E-02 |
| 95 | GO:0009845: seed germination | 4.23E-02 |
| 96 | GO:0042744: hydrogen peroxide catabolic process | 4.38E-02 |
| 97 | GO:0009790: embryo development | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 2 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 3 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 4 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 9.69E-05 |
| 5 | GO:0004830: tryptophan-tRNA ligase activity | 9.69E-05 |
| 6 | GO:0050736: O-malonyltransferase activity | 2.28E-04 |
| 7 | GO:0009884: cytokinin receptor activity | 2.28E-04 |
| 8 | GO:0003938: IMP dehydrogenase activity | 2.28E-04 |
| 9 | GO:0004047: aminomethyltransferase activity | 2.28E-04 |
| 10 | GO:0045548: phenylalanine ammonia-lyase activity | 3.80E-04 |
| 11 | GO:0005034: osmosensor activity | 3.80E-04 |
| 12 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 3.80E-04 |
| 13 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 3.80E-04 |
| 14 | GO:0017172: cysteine dioxygenase activity | 5.46E-04 |
| 15 | GO:0080031: methyl salicylate esterase activity | 5.46E-04 |
| 16 | GO:0070628: proteasome binding | 7.26E-04 |
| 17 | GO:0004845: uracil phosphoribosyltransferase activity | 7.26E-04 |
| 18 | GO:0004784: superoxide dismutase activity | 1.12E-03 |
| 19 | GO:0031593: polyubiquitin binding | 1.12E-03 |
| 20 | GO:0080030: methyl indole-3-acetate esterase activity | 1.12E-03 |
| 21 | GO:0004849: uridine kinase activity | 1.34E-03 |
| 22 | GO:0004656: procollagen-proline 4-dioxygenase activity | 1.34E-03 |
| 23 | GO:0019900: kinase binding | 1.34E-03 |
| 24 | GO:0046914: transition metal ion binding | 2.07E-03 |
| 25 | GO:0004673: protein histidine kinase activity | 2.90E-03 |
| 26 | GO:0015266: protein channel activity | 3.82E-03 |
| 27 | GO:0000155: phosphorelay sensor kinase activity | 3.82E-03 |
| 28 | GO:0004519: endonuclease activity | 4.09E-03 |
| 29 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 4.83E-03 |
| 30 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 4.83E-03 |
| 31 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 4.83E-03 |
| 32 | GO:0043130: ubiquitin binding | 5.19E-03 |
| 33 | GO:0031418: L-ascorbic acid binding | 5.19E-03 |
| 34 | GO:0004857: enzyme inhibitor activity | 5.19E-03 |
| 35 | GO:0043424: protein histidine kinase binding | 5.55E-03 |
| 36 | GO:0005345: purine nucleobase transmembrane transporter activity | 5.55E-03 |
| 37 | GO:0051087: chaperone binding | 5.55E-03 |
| 38 | GO:0016760: cellulose synthase (UDP-forming) activity | 6.70E-03 |
| 39 | GO:0004812: aminoacyl-tRNA ligase activity | 7.51E-03 |
| 40 | GO:0010181: FMN binding | 8.79E-03 |
| 41 | GO:0005355: glucose transmembrane transporter activity | 8.79E-03 |
| 42 | GO:0003684: damaged DNA binding | 1.11E-02 |
| 43 | GO:0016759: cellulose synthase activity | 1.11E-02 |
| 44 | GO:0016788: hydrolase activity, acting on ester bonds | 1.14E-02 |
| 45 | GO:0005200: structural constituent of cytoskeleton | 1.16E-02 |
| 46 | GO:0016413: O-acetyltransferase activity | 1.20E-02 |
| 47 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.51E-02 |
| 48 | GO:0005096: GTPase activator activity | 1.57E-02 |
| 49 | GO:0004222: metalloendopeptidase activity | 1.62E-02 |
| 50 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.68E-02 |
| 51 | GO:0003697: single-stranded DNA binding | 1.79E-02 |
| 52 | GO:0003924: GTPase activity | 2.06E-02 |
| 53 | GO:0043621: protein self-association | 2.27E-02 |
| 54 | GO:0035091: phosphatidylinositol binding | 2.27E-02 |
| 55 | GO:0051287: NAD binding | 2.46E-02 |
| 56 | GO:0003690: double-stranded DNA binding | 2.72E-02 |
| 57 | GO:0003779: actin binding | 3.33E-02 |
| 58 | GO:0003723: RNA binding | 3.45E-02 |
| 59 | GO:0004386: helicase activity | 3.62E-02 |
| 60 | GO:0019843: rRNA binding | 4.00E-02 |
| 61 | GO:0016740: transferase activity | 4.44E-02 |
| 62 | GO:0015144: carbohydrate transmembrane transporter activity | 4.54E-02 |
| 63 | GO:0008565: protein transporter activity | 4.54E-02 |
| 64 | GO:0046910: pectinesterase inhibitor activity | 4.78E-02 |
| 65 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.80E-02 |
| 66 | GO:0005351: sugar:proton symporter activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000408: EKC/KEOPS complex | 0.00E+00 |
| 2 | GO:0009537: proplastid | 0.00E+00 |
| 3 | GO:0035452: extrinsic component of plastid membrane | 0.00E+00 |
| 4 | GO:0009513: etioplast | 2.28E-04 |
| 5 | GO:0009509: chromoplast | 3.80E-04 |
| 6 | GO:0042646: plastid nucleoid | 5.46E-04 |
| 7 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 5.46E-04 |
| 8 | GO:0031305: integral component of mitochondrial inner membrane | 1.81E-03 |
| 9 | GO:0009501: amyloplast | 1.81E-03 |
| 10 | GO:0009507: chloroplast | 1.95E-03 |
| 11 | GO:0042644: chloroplast nucleoid | 2.33E-03 |
| 12 | GO:0009570: chloroplast stroma | 2.85E-03 |
| 13 | GO:0016602: CCAAT-binding factor complex | 3.82E-03 |
| 14 | GO:0009574: preprophase band | 3.82E-03 |
| 15 | GO:0005578: proteinaceous extracellular matrix | 3.82E-03 |
| 16 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 7.10E-03 |
| 17 | GO:0031965: nuclear membrane | 9.23E-03 |
| 18 | GO:0005886: plasma membrane | 1.09E-02 |
| 19 | GO:0009295: nucleoid | 1.16E-02 |
| 20 | GO:0005802: trans-Golgi network | 1.39E-02 |
| 21 | GO:0009707: chloroplast outer membrane | 1.51E-02 |
| 22 | GO:0005768: endosome | 1.63E-02 |
| 23 | GO:0005856: cytoskeleton | 2.33E-02 |
| 24 | GO:0009505: plant-type cell wall | 2.47E-02 |
| 25 | GO:0005789: endoplasmic reticulum membrane | 3.17E-02 |
| 26 | GO:0009706: chloroplast inner membrane | 3.41E-02 |
| 27 | GO:0010287: plastoglobule | 3.85E-02 |
| 28 | GO:0005623: cell | 4.07E-02 |
| 29 | GO:0009579: thylakoid | 4.36E-02 |
| 30 | GO:0005759: mitochondrial matrix | 4.70E-02 |
| 31 | GO:0005737: cytoplasm | 4.97E-02 |