co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G04490

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1905177: tracheary element differentiation	0.00E+00
2	GO:0008298: intracellular mRNA localization	0.00E+00
3	GO:0015882: L-ascorbic acid transport	0.00E+00
4	GO:1904964: positive regulation of phytol biosynthetic process	0.00E+00
5	GO:0018023: peptidyl-lysine trimethylation	0.00E+00
6	GO:0006399: tRNA metabolic process	0.00E+00
7	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
8	GO:0070979: protein K11-linked ubiquitination	0.00E+00
9	GO:0010059: positive regulation of atrichoblast fate specification	0.00E+00
10	GO:1905421: regulation of plant organ morphogenesis	0.00E+00
11	GO:2000469: negative regulation of peroxidase activity	0.00E+00
12	GO:0017038: protein import	0.00E+00
13	GO:0030155: regulation of cell adhesion	0.00E+00
14	GO:0090697: post-embryonic plant organ morphogenesis	0.00E+00
15	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
16	GO:0042820: vitamin B6 catabolic process	0.00E+00
17	GO:1904966: positive regulation of vitamin E biosynthetic process	0.00E+00
18	GO:1902326: positive regulation of chlorophyll biosynthetic process	0.00E+00
19	GO:0042821: pyridoxal biosynthetic process	0.00E+00
20	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
21	GO:0009658: chloroplast organization	5.31E-07
22	GO:0010027: thylakoid membrane organization	2.01E-06
23	GO:0045038: protein import into chloroplast thylakoid membrane	5.52E-06
24	GO:0005977: glycogen metabolic process	4.88E-05
25	GO:0071482: cellular response to light stimulus	5.61E-05
26	GO:2001141: regulation of RNA biosynthetic process	1.03E-04
27	GO:0015979: photosynthesis	1.11E-04
28	GO:0009791: post-embryonic development	1.54E-04
29	GO:0010021: amylopectin biosynthetic process	1.77E-04
30	GO:0010207: photosystem II assembly	2.73E-04
31	GO:0015995: chlorophyll biosynthetic process	4.23E-04
32	GO:0000481: maturation of 5S rRNA	5.80E-04
33	GO:0006659: phosphatidylserine biosynthetic process	5.80E-04
34	GO:0051775: response to redox state	5.80E-04
35	GO:0042371: vitamin K biosynthetic process	5.80E-04
36	GO:2000021: regulation of ion homeostasis	5.80E-04
37	GO:0070574: cadmium ion transmembrane transport	5.80E-04
38	GO:0051247: positive regulation of protein metabolic process	5.80E-04
39	GO:1902458: positive regulation of stomatal opening	5.80E-04
40	GO:0010028: xanthophyll cycle	5.80E-04
41	GO:0034337: RNA folding	5.80E-04
42	GO:2000905: negative regulation of starch metabolic process	5.80E-04
43	GO:0000305: response to oxygen radical	5.80E-04
44	GO:0000476: maturation of 4.5S rRNA	5.80E-04
45	GO:0009443: pyridoxal 5'-phosphate salvage	5.80E-04
46	GO:0006419: alanyl-tRNA aminoacylation	5.80E-04
47	GO:0000967: rRNA 5'-end processing	5.80E-04
48	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	5.80E-04
49	GO:0031426: polycistronic mRNA processing	5.80E-04
50	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	5.80E-04
51	GO:0046900: tetrahydrofolylpolyglutamate metabolic process	5.80E-04
52	GO:0043266: regulation of potassium ion transport	5.80E-04
53	GO:0010063: positive regulation of trichoblast fate specification	5.80E-04
54	GO:0006400: tRNA modification	6.42E-04
55	GO:0006605: protein targeting	7.99E-04
56	GO:0009646: response to absence of light	1.13E-03
57	GO:0019252: starch biosynthetic process	1.24E-03
58	GO:1904143: positive regulation of carotenoid biosynthetic process	1.25E-03
59	GO:0001682: tRNA 5'-leader removal	1.25E-03
60	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.25E-03
61	GO:0006568: tryptophan metabolic process	1.25E-03
62	GO:0010024: phytochromobilin biosynthetic process	1.25E-03
63	GO:0034470: ncRNA processing	1.25E-03
64	GO:1900871: chloroplast mRNA modification	1.25E-03
65	GO:0051645: Golgi localization	1.25E-03
66	GO:0060359: response to ammonium ion	1.25E-03
67	GO:1901959: positive regulation of cutin biosynthetic process	1.25E-03
68	GO:0018026: peptidyl-lysine monomethylation	1.25E-03
69	GO:0060151: peroxisome localization	1.25E-03
70	GO:0000256: allantoin catabolic process	1.25E-03
71	GO:0032502: developmental process	1.47E-03
72	GO:0010583: response to cyclopentenone	1.47E-03
73	GO:0019684: photosynthesis, light reaction	1.85E-03
74	GO:0009773: photosynthetic electron transport in photosystem I	1.85E-03
75	GO:0006352: DNA-templated transcription, initiation	1.85E-03
76	GO:0051646: mitochondrion localization	2.05E-03
77	GO:0090153: regulation of sphingolipid biosynthetic process	2.05E-03
78	GO:1904278: positive regulation of wax biosynthetic process	2.05E-03
79	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	2.05E-03
80	GO:0006760: folic acid-containing compound metabolic process	2.05E-03
81	GO:0043157: response to cation stress	2.05E-03
82	GO:0048586: regulation of long-day photoperiodism, flowering	2.05E-03
83	GO:0006954: inflammatory response	2.05E-03
84	GO:0048281: inflorescence morphogenesis	2.05E-03
85	GO:0010136: ureide catabolic process	2.05E-03
86	GO:0034051: negative regulation of plant-type hypersensitive response	2.05E-03
87	GO:0031145: anaphase-promoting complex-dependent catabolic process	2.05E-03
88	GO:0090436: leaf pavement cell development	2.05E-03
89	GO:0010623: programmed cell death involved in cell development	2.05E-03
90	GO:0006788: heme oxidation	2.05E-03
91	GO:0016024: CDP-diacylglycerol biosynthetic process	2.12E-03
92	GO:0009767: photosynthetic electron transport chain	2.41E-03
93	GO:0048467: gynoecium development	2.73E-03
94	GO:0016556: mRNA modification	2.98E-03
95	GO:0090308: regulation of methylation-dependent chromatin silencing	2.98E-03
96	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.98E-03
97	GO:0010071: root meristem specification	2.98E-03
98	GO:0009102: biotin biosynthetic process	2.98E-03
99	GO:0030071: regulation of mitotic metaphase/anaphase transition	2.98E-03
100	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.98E-03
101	GO:0006107: oxaloacetate metabolic process	2.98E-03
102	GO:0009226: nucleotide-sugar biosynthetic process	2.98E-03
103	GO:0010239: chloroplast mRNA processing	2.98E-03
104	GO:0006145: purine nucleobase catabolic process	2.98E-03
105	GO:0010148: transpiration	2.98E-03
106	GO:0008295: spermidine biosynthetic process	4.02E-03
107	GO:0006749: glutathione metabolic process	4.02E-03
108	GO:0010109: regulation of photosynthesis	4.02E-03
109	GO:0010107: potassium ion import	4.02E-03
110	GO:0031122: cytoplasmic microtubule organization	4.02E-03
111	GO:0006661: phosphatidylinositol biosynthetic process	4.02E-03
112	GO:0009765: photosynthesis, light harvesting	4.02E-03
113	GO:2000306: positive regulation of photomorphogenesis	4.02E-03
114	GO:0006109: regulation of carbohydrate metabolic process	4.02E-03
115	GO:0006546: glycine catabolic process	4.02E-03
116	GO:0046656: folic acid biosynthetic process	4.02E-03
117	GO:0006021: inositol biosynthetic process	4.02E-03
118	GO:0045723: positive regulation of fatty acid biosynthetic process	4.02E-03
119	GO:0006734: NADH metabolic process	4.02E-03
120	GO:0010508: positive regulation of autophagy	4.02E-03
121	GO:0007017: microtubule-based process	4.19E-03
122	GO:0030245: cellulose catabolic process	5.04E-03
123	GO:0016123: xanthophyll biosynthetic process	5.16E-03
124	GO:0080110: sporopollenin biosynthetic process	5.16E-03
125	GO:0032876: negative regulation of DNA endoreduplication	5.16E-03
126	GO:0098719: sodium ion import across plasma membrane	5.16E-03
127	GO:0005975: carbohydrate metabolic process	5.62E-03
128	GO:0050665: hydrogen peroxide biosynthetic process	6.40E-03
129	GO:0000741: karyogamy	6.40E-03
130	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	6.40E-03
131	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	6.40E-03
132	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	6.40E-03
133	GO:0009959: negative gravitropism	6.40E-03
134	GO:0006655: phosphatidylglycerol biosynthetic process	6.40E-03
135	GO:0016554: cytidine to uridine editing	6.40E-03
136	GO:0032973: amino acid export	6.40E-03
137	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.50E-03
138	GO:0008033: tRNA processing	7.03E-03
139	GO:0010087: phloem or xylem histogenesis	7.03E-03
140	GO:1901259: chloroplast rRNA processing	7.73E-03
141	GO:0009854: oxidative photosynthetic carbon pathway	7.73E-03
142	GO:0080086: stamen filament development	7.73E-03
143	GO:0017148: negative regulation of translation	7.73E-03
144	GO:0048280: vesicle fusion with Golgi apparatus	7.73E-03
145	GO:0046654: tetrahydrofolate biosynthetic process	7.73E-03
146	GO:0008654: phospholipid biosynthetic process	8.77E-03
147	GO:0030307: positive regulation of cell growth	9.15E-03
148	GO:0010103: stomatal complex morphogenesis	9.15E-03
149	GO:0043090: amino acid import	9.15E-03
150	GO:0070370: cellular heat acclimation	9.15E-03
151	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	9.15E-03
152	GO:0048437: floral organ development	9.15E-03
153	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	9.15E-03
154	GO:0009416: response to light stimulus	9.24E-03
155	GO:0042255: ribosome assembly	1.07E-02
156	GO:0046620: regulation of organ growth	1.07E-02
157	GO:0006353: DNA-templated transcription, termination	1.07E-02
158	GO:2000070: regulation of response to water deprivation	1.07E-02
159	GO:0010090: trichome morphogenesis	1.07E-02
160	GO:0006875: cellular metal ion homeostasis	1.07E-02
161	GO:0055075: potassium ion homeostasis	1.07E-02
162	GO:0007155: cell adhesion	1.07E-02
163	GO:0048564: photosystem I assembly	1.07E-02
164	GO:0009690: cytokinin metabolic process	1.07E-02
165	GO:0010078: maintenance of root meristem identity	1.07E-02
166	GO:0032875: regulation of DNA endoreduplication	1.07E-02
167	GO:0032508: DNA duplex unwinding	1.07E-02
168	GO:0048367: shoot system development	1.08E-02
169	GO:0043562: cellular response to nitrogen levels	1.23E-02
170	GO:0017004: cytochrome complex assembly	1.23E-02
171	GO:0001558: regulation of cell growth	1.23E-02
172	GO:0015996: chlorophyll catabolic process	1.23E-02
173	GO:0007186: G-protein coupled receptor signaling pathway	1.23E-02
174	GO:0010204: defense response signaling pathway, resistance gene-independent	1.23E-02
175	GO:0009657: plastid organization	1.23E-02
176	GO:0048507: meristem development	1.39E-02
177	GO:0006754: ATP biosynthetic process	1.39E-02
178	GO:0000373: Group II intron splicing	1.39E-02
179	GO:0000902: cell morphogenesis	1.39E-02
180	GO:0098656: anion transmembrane transport	1.39E-02
181	GO:0010206: photosystem II repair	1.39E-02
182	GO:0080144: amino acid homeostasis	1.39E-02
183	GO:0090333: regulation of stomatal closure	1.39E-02
184	GO:0010029: regulation of seed germination	1.45E-02
185	GO:0051453: regulation of intracellular pH	1.57E-02
186	GO:0009638: phototropism	1.57E-02
187	GO:0006779: porphyrin-containing compound biosynthetic process	1.57E-02
188	GO:1900865: chloroplast RNA modification	1.57E-02
189	GO:0048366: leaf development	1.65E-02
190	GO:0006896: Golgi to vacuole transport	1.75E-02
191	GO:0006782: protoporphyrinogen IX biosynthetic process	1.75E-02
192	GO:0019538: protein metabolic process	1.75E-02
193	GO:0018298: protein-chromophore linkage	1.79E-02
194	GO:0006415: translational termination	1.94E-02
195	GO:0010216: maintenance of DNA methylation	1.94E-02
196	GO:0009684: indoleacetic acid biosynthetic process	1.94E-02
197	GO:0009089: lysine biosynthetic process via diaminopimelate	1.94E-02
198	GO:0043085: positive regulation of catalytic activity	1.94E-02
199	GO:0048527: lateral root development	2.07E-02
200	GO:0045037: protein import into chloroplast stroma	2.14E-02
201	GO:0006108: malate metabolic process	2.34E-02
202	GO:0009718: anthocyanin-containing compound biosynthetic process	2.34E-02
203	GO:0030048: actin filament-based movement	2.34E-02
204	GO:0010588: cotyledon vascular tissue pattern formation	2.34E-02
205	GO:0010628: positive regulation of gene expression	2.34E-02
206	GO:0009887: animal organ morphogenesis	2.56E-02
207	GO:0010143: cutin biosynthetic process	2.56E-02
208	GO:0006541: glutamine metabolic process	2.56E-02
209	GO:0055114: oxidation-reduction process	2.59E-02
210	GO:0010030: positive regulation of seed germination	2.77E-02
211	GO:0019853: L-ascorbic acid biosynthetic process	2.77E-02
212	GO:0006810: transport	3.09E-02
213	GO:0009944: polarity specification of adaxial/abaxial axis	3.23E-02
214	GO:0051302: regulation of cell division	3.46E-02
215	GO:0019953: sexual reproduction	3.46E-02
216	GO:0008299: isoprenoid biosynthetic process	3.46E-02
217	GO:0009664: plant-type cell wall organization	3.67E-02
218	GO:0010431: seed maturation	3.70E-02
219	GO:0019915: lipid storage	3.70E-02
220	GO:0006730: one-carbon metabolic process	3.95E-02
221	GO:0001944: vasculature development	4.20E-02
222	GO:0006012: galactose metabolic process	4.20E-02
223	GO:0009686: gibberellin biosynthetic process	4.20E-02
224	GO:0019722: calcium-mediated signaling	4.46E-02
225	GO:0009306: protein secretion	4.46E-02
226	GO:0009561: megagametogenesis	4.46E-02
227	GO:0010089: xylem development	4.46E-02
228	GO:0010584: pollen exine formation	4.46E-02
229	GO:0042127: regulation of cell proliferation	4.46E-02
230	GO:0016117: carotenoid biosynthetic process	4.72E-02
231	GO:0042147: retrograde transport, endosome to Golgi	4.72E-02
232	GO:0042631: cellular response to water deprivation	4.98E-02
233	GO:0080022: primary root development	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
2	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
3	GO:0005048: signal sequence binding	0.00E+00
4	GO:0004076: biotin synthase activity	0.00E+00
5	GO:0019144: ADP-sugar diphosphatase activity	0.00E+00
6	GO:0050613: delta14-sterol reductase activity	0.00E+00
7	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
8	GO:0046554: malate dehydrogenase (NADP+) activity	0.00E+00
9	GO:0050236: pyridoxine:NADP 4-dehydrogenase activity	0.00E+00
10	GO:0015229: L-ascorbic acid transporter activity	0.00E+00
11	GO:0019156: isoamylase activity	1.47E-05
12	GO:0005528: FK506 binding	3.08E-05
13	GO:0070402: NADPH binding	4.88E-05
14	GO:0016851: magnesium chelatase activity	1.03E-04
15	GO:0043495: protein anchor	1.77E-04
16	GO:0001053: plastid sigma factor activity	1.77E-04
17	GO:0016987: sigma factor activity	1.77E-04
18	GO:0004556: alpha-amylase activity	3.77E-04
19	GO:0004462: lactoylglutathione lyase activity	3.77E-04
20	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	5.80E-04
21	GO:0008746: NAD(P)+ transhydrogenase activity	5.80E-04
22	GO:0004328: formamidase activity	5.80E-04
23	GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity	5.80E-04
24	GO:0051777: ent-kaurenoate oxidase activity	5.80E-04
25	GO:0004425: indole-3-glycerol-phosphate synthase activity	5.80E-04
26	GO:0008568: microtubule-severing ATPase activity	5.80E-04
27	GO:0080042: ADP-glucose pyrophosphohydrolase activity	5.80E-04
28	GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity	5.80E-04
29	GO:0008158: hedgehog receptor activity	5.80E-04
30	GO:0004813: alanine-tRNA ligase activity	5.80E-04
31	GO:0005080: protein kinase C binding	5.80E-04
32	GO:0008242: omega peptidase activity	5.80E-04
33	GO:0019899: enzyme binding	6.42E-04
34	GO:0004033: aldo-keto reductase (NADP) activity	7.99E-04
35	GO:0004512: inositol-3-phosphate synthase activity	1.25E-03
36	GO:0048531: beta-1,3-galactosyltransferase activity	1.25E-03
37	GO:0004103: choline kinase activity	1.25E-03
38	GO:0004362: glutathione-disulfide reductase activity	1.25E-03
39	GO:0080041: ADP-ribose pyrophosphohydrolase activity	1.25E-03
40	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.25E-03
41	GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity	1.25E-03
42	GO:0004047: aminomethyltransferase activity	1.25E-03
43	GO:0004766: spermidine synthase activity	1.25E-03
44	GO:0102083: 7,8-dihydromonapterin aldolase activity	1.25E-03
45	GO:0080097: L-tryptophan:pyruvate aminotransferase activity	1.25E-03
46	GO:0004150: dihydroneopterin aldolase activity	1.25E-03
47	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.25E-03
48	GO:0034722: gamma-glutamyl-peptidase activity	1.25E-03
49	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.34E-03
50	GO:0015020: glucuronosyltransferase activity	1.60E-03
51	GO:0015462: ATPase-coupled protein transmembrane transporter activity	2.05E-03
52	GO:0004848: ureidoglycolate hydrolase activity	2.05E-03
53	GO:0004751: ribose-5-phosphate isomerase activity	2.05E-03
54	GO:0000976: transcription regulatory region sequence-specific DNA binding	2.12E-03
55	GO:0031072: heat shock protein binding	2.41E-03
56	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	2.73E-03
57	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.98E-03
58	GO:0043023: ribosomal large subunit binding	2.98E-03
59	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	2.98E-03
60	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	2.98E-03
61	GO:0015086: cadmium ion transmembrane transporter activity	2.98E-03
62	GO:0016149: translation release factor activity, codon specific	2.98E-03
63	GO:0003883: CTP synthase activity	2.98E-03
64	GO:0048027: mRNA 5'-UTR binding	2.98E-03
65	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.98E-03
66	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	2.98E-03
67	GO:0004222: metalloendopeptidase activity	3.45E-03
68	GO:0016491: oxidoreductase activity	3.92E-03
69	GO:0008891: glycolate oxidase activity	4.02E-03
70	GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity	4.02E-03
71	GO:0016279: protein-lysine N-methyltransferase activity	4.02E-03
72	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.02E-03
73	GO:0009011: starch synthase activity	4.02E-03
74	GO:0004045: aminoacyl-tRNA hydrolase activity	4.02E-03
75	GO:0080032: methyl jasmonate esterase activity	4.02E-03
76	GO:0019199: transmembrane receptor protein kinase activity	4.02E-03
77	GO:0042277: peptide binding	4.02E-03
78	GO:0004392: heme oxygenase (decyclizing) activity	4.02E-03
79	GO:0005275: amine transmembrane transporter activity	5.16E-03
80	GO:0016846: carbon-sulfur lyase activity	5.16E-03
81	GO:0022891: substrate-specific transmembrane transporter activity	5.51E-03
82	GO:0008810: cellulase activity	5.51E-03
83	GO:0008514: organic anion transmembrane transporter activity	5.99E-03
84	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	6.40E-03
85	GO:0015081: sodium ion transmembrane transporter activity	6.40E-03
86	GO:0016615: malate dehydrogenase activity	6.40E-03
87	GO:0008200: ion channel inhibitor activity	6.40E-03
88	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	6.40E-03
89	GO:0080030: methyl indole-3-acetate esterase activity	6.40E-03
90	GO:0004526: ribonuclease P activity	6.40E-03
91	GO:0030060: L-malate dehydrogenase activity	7.73E-03
92	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	7.73E-03
93	GO:0008195: phosphatidate phosphatase activity	7.73E-03
94	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	7.73E-03
95	GO:0005525: GTP binding	8.97E-03
96	GO:0015103: inorganic anion transmembrane transporter activity	9.15E-03
97	GO:0048038: quinone binding	9.39E-03
98	GO:0042802: identical protein binding	9.56E-03
99	GO:0003924: GTPase activity	1.00E-02
100	GO:0008312: 7S RNA binding	1.07E-02
101	GO:0043022: ribosome binding	1.07E-02
102	GO:0005200: structural constituent of cytoskeleton	1.21E-02
103	GO:0008237: metallopeptidase activity	1.21E-02
104	GO:0008483: transaminase activity	1.21E-02
105	GO:0008135: translation factor activity, RNA binding	1.23E-02
106	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.39E-02
107	GO:0003747: translation release factor activity	1.39E-02
108	GO:0016168: chlorophyll binding	1.45E-02
109	GO:0030955: potassium ion binding	1.57E-02
110	GO:0004743: pyruvate kinase activity	1.57E-02
111	GO:0003824: catalytic activity	1.70E-02
112	GO:0008047: enzyme activator activity	1.75E-02
113	GO:0008559: xenobiotic-transporting ATPase activity	1.94E-02
114	GO:0015386: potassium:proton antiporter activity	1.94E-02
115	GO:0016887: ATPase activity	2.13E-02
116	GO:0000049: tRNA binding	2.14E-02
117	GO:0008378: galactosyltransferase activity	2.14E-02
118	GO:0005315: inorganic phosphate transmembrane transporter activity	2.34E-02
119	GO:0003725: double-stranded RNA binding	2.34E-02
120	GO:0008081: phosphoric diester hydrolase activity	2.34E-02
121	GO:0003993: acid phosphatase activity	2.37E-02
122	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.48E-02
123	GO:0004871: signal transducer activity	2.50E-02
124	GO:0008266: poly(U) RNA binding	2.56E-02
125	GO:0003774: motor activity	2.56E-02
126	GO:0035091: phosphatidylinositol binding	3.17E-02
127	GO:0004857: enzyme inhibitor activity	3.23E-02
128	GO:0005345: purine nucleobase transmembrane transporter activity	3.46E-02
129	GO:0004176: ATP-dependent peptidase activity	3.70E-02
130	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.94E-02
131	GO:0003690: double-stranded DNA binding	4.08E-02
132	GO:0030570: pectate lyase activity	4.20E-02
133	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.23E-02
134	GO:0015171: amino acid transmembrane transporter activity	4.36E-02
135	GO:0003727: single-stranded RNA binding	4.46E-02
136	GO:0016788: hydrolase activity, acting on ester bonds	4.61E-02
137	GO:0047134: protein-disulfide reductase activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0009507: chloroplast	2.99E-33
3	GO:0009570: chloroplast stroma	5.43E-16
4	GO:0009535: chloroplast thylakoid membrane	1.98E-13
5	GO:0009543: chloroplast thylakoid lumen	1.38E-08
6	GO:0009534: chloroplast thylakoid	6.13E-06
7	GO:0080085: signal recognition particle, chloroplast targeting	1.47E-05
8	GO:0010007: magnesium chelatase complex	4.88E-05
9	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.56E-05
10	GO:0031977: thylakoid lumen	1.49E-04
11	GO:0009941: chloroplast envelope	1.74E-04
12	GO:0042651: thylakoid membrane	4.86E-04
13	GO:0009654: photosystem II oxygen evolving complex	4.86E-04
14	GO:0009344: nitrite reductase complex [NAD(P)H]	5.80E-04
15	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	9.71E-04
16	GO:0019898: extrinsic component of membrane	1.24E-03
17	GO:0009579: thylakoid	1.50E-03
18	GO:0010319: stromule	1.86E-03
19	GO:0009528: plastid inner membrane	2.05E-03
20	GO:0015630: microtubule cytoskeleton	2.98E-03
21	GO:0030658: transport vesicle membrane	2.98E-03
22	GO:0016021: integral component of membrane	3.74E-03
23	GO:0009527: plastid outer membrane	4.02E-03
24	GO:0031969: chloroplast membrane	5.05E-03
25	GO:0009523: photosystem II	8.77E-03
26	GO:0046658: anchored component of plasma membrane	1.02E-02
27	GO:0012507: ER to Golgi transport vesicle membrane	1.07E-02
28	GO:0009706: chloroplast inner membrane	1.31E-02
29	GO:0030529: intracellular ribonucleoprotein complex	1.37E-02
30	GO:0045298: tubulin complex	1.39E-02
31	GO:0005720: nuclear heterochromatin	1.39E-02
32	GO:0005680: anaphase-promoting complex	1.39E-02
33	GO:0042644: chloroplast nucleoid	1.39E-02
34	GO:0005773: vacuole	1.48E-02
35	GO:0016604: nuclear body	1.57E-02
36	GO:0016459: myosin complex	1.75E-02
37	GO:0009707: chloroplast outer membrane	1.79E-02
38	GO:0032040: small-subunit processome	2.14E-02
39	GO:0009508: plastid chromosome	2.34E-02
40	GO:0030095: chloroplast photosystem II	2.56E-02
41	GO:0030176: integral component of endoplasmic reticulum membrane	2.77E-02
42	GO:0016020: membrane	3.65E-02
43	GO:0009532: plastid stroma	3.70E-02