co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G03760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006907: pinocytosis	0.00E+00
2	GO:0070125: mitochondrial translational elongation	0.00E+00
3	GO:0019323: pentose catabolic process	0.00E+00
4	GO:0001778: plasma membrane repair	0.00E+00
5	GO:0007638: mechanosensory behavior	0.00E+00
6	GO:1905255: regulation of RNA binding transcription factor activity	0.00E+00
7	GO:0046620: regulation of organ growth	8.02E-06
8	GO:0016123: xanthophyll biosynthetic process	9.36E-05
9	GO:0016554: cytidine to uridine editing	1.36E-04
10	GO:0040008: regulation of growth	2.50E-04
11	GO:0070509: calcium ion import	3.02E-04
12	GO:0044262: cellular carbohydrate metabolic process	3.02E-04
13	GO:0010480: microsporocyte differentiation	3.02E-04
14	GO:0042759: long-chain fatty acid biosynthetic process	3.02E-04
15	GO:1902458: positive regulation of stomatal opening	3.02E-04
16	GO:2000070: regulation of response to water deprivation	3.05E-04
17	GO:1900865: chloroplast RNA modification	5.34E-04
18	GO:0009733: response to auxin	6.49E-04
19	GO:0009786: regulation of asymmetric cell division	6.60E-04
20	GO:0046740: transport of virus in host, cell to cell	6.60E-04
21	GO:0031648: protein destabilization	6.60E-04
22	GO:1903426: regulation of reactive oxygen species biosynthetic process	6.60E-04
23	GO:2000123: positive regulation of stomatal complex development	6.60E-04
24	GO:0080055: low-affinity nitrate transport	1.07E-03
25	GO:0006696: ergosterol biosynthetic process	1.07E-03
26	GO:0045910: negative regulation of DNA recombination	1.07E-03
27	GO:1902448: positive regulation of shade avoidance	1.07E-03
28	GO:0070588: calcium ion transmembrane transport	1.17E-03
29	GO:0010025: wax biosynthetic process	1.30E-03
30	GO:0006612: protein targeting to membrane	1.53E-03
31	GO:0007231: osmosensory signaling pathway	1.53E-03
32	GO:0051639: actin filament network formation	1.53E-03
33	GO:0032456: endocytic recycling	1.53E-03
34	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.53E-03
35	GO:1990019: protein storage vacuole organization	1.53E-03
36	GO:0009052: pentose-phosphate shunt, non-oxidative branch	1.53E-03
37	GO:0009926: auxin polar transport	1.63E-03
38	GO:0033500: carbohydrate homeostasis	2.06E-03
39	GO:2000038: regulation of stomatal complex development	2.06E-03
40	GO:0009755: hormone-mediated signaling pathway	2.06E-03
41	GO:0051764: actin crosslink formation	2.06E-03
42	GO:0009765: photosynthesis, light harvesting	2.06E-03
43	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	2.07E-03
44	GO:0016117: carotenoid biosynthetic process	2.44E-03
45	GO:0045038: protein import into chloroplast thylakoid membrane	2.63E-03
46	GO:0010438: cellular response to sulfur starvation	2.63E-03
47	GO:0010375: stomatal complex patterning	2.63E-03
48	GO:0016120: carotene biosynthetic process	2.63E-03
49	GO:0080110: sporopollenin biosynthetic process	2.63E-03
50	GO:0007018: microtubule-based movement	3.05E-03
51	GO:0009734: auxin-activated signaling pathway	3.22E-03
52	GO:1902456: regulation of stomatal opening	3.24E-03
53	GO:0016032: viral process	3.74E-03
54	GO:0042372: phylloquinone biosynthetic process	3.90E-03
55	GO:0009612: response to mechanical stimulus	3.90E-03
56	GO:0030488: tRNA methylation	3.90E-03
57	GO:0031930: mitochondria-nucleus signaling pathway	3.90E-03
58	GO:0009742: brassinosteroid mediated signaling pathway	4.02E-03
59	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.20E-03
60	GO:0009828: plant-type cell wall loosening	4.25E-03
61	GO:0010444: guard mother cell differentiation	4.60E-03
62	GO:0015693: magnesium ion transport	4.60E-03
63	GO:0048528: post-embryonic root development	4.60E-03
64	GO:0048437: floral organ development	4.60E-03
65	GO:0010027: thylakoid membrane organization	5.06E-03
66	GO:0010439: regulation of glucosinolate biosynthetic process	5.35E-03
67	GO:0000105: histidine biosynthetic process	5.35E-03
68	GO:0009819: drought recovery	5.35E-03
69	GO:0032544: plastid translation	6.13E-03
70	GO:0015996: chlorophyll catabolic process	6.13E-03
71	GO:0007186: G-protein coupled receptor signaling pathway	6.13E-03
72	GO:0009657: plastid organization	6.13E-03
73	GO:0016042: lipid catabolic process	6.90E-03
74	GO:0051865: protein autoubiquitination	6.95E-03
75	GO:0009638: phototropism	7.80E-03
76	GO:0042761: very long-chain fatty acid biosynthetic process	7.80E-03
77	GO:0009299: mRNA transcription	8.70E-03
78	GO:0006535: cysteine biosynthetic process from serine	8.70E-03
79	GO:0048829: root cap development	8.70E-03
80	GO:0009641: shade avoidance	8.70E-03
81	GO:0006298: mismatch repair	8.70E-03
82	GO:0006949: syncytium formation	8.70E-03
83	GO:0007166: cell surface receptor signaling pathway	8.89E-03
84	GO:0048229: gametophyte development	9.63E-03
85	GO:0006816: calcium ion transport	9.63E-03
86	GO:0009682: induced systemic resistance	9.63E-03
87	GO:0006415: translational termination	9.63E-03
88	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.06E-02
89	GO:0045037: protein import into chloroplast stroma	1.06E-02
90	GO:0050826: response to freezing	1.16E-02
91	GO:0010075: regulation of meristem growth	1.16E-02
92	GO:0009725: response to hormone	1.16E-02
93	GO:0010588: cotyledon vascular tissue pattern formation	1.16E-02
94	GO:0009785: blue light signaling pathway	1.16E-02
95	GO:0009826: unidimensional cell growth	1.25E-02
96	GO:0010207: photosystem II assembly	1.26E-02
97	GO:0009934: regulation of meristem structural organization	1.26E-02
98	GO:0010020: chloroplast fission	1.26E-02
99	GO:0009664: plant-type cell wall organization	1.36E-02
100	GO:0090351: seedling development	1.37E-02
101	GO:0000162: tryptophan biosynthetic process	1.48E-02
102	GO:0051017: actin filament bundle assembly	1.59E-02
103	GO:0019344: cysteine biosynthetic process	1.59E-02
104	GO:0048511: rhythmic process	1.82E-02
105	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.95E-02
106	GO:0010082: regulation of root meristem growth	2.07E-02
107	GO:0009625: response to insect	2.07E-02
108	GO:0010584: pollen exine formation	2.20E-02
109	GO:0006284: base-excision repair	2.20E-02
110	GO:0080022: primary root development	2.46E-02
111	GO:0010087: phloem or xylem histogenesis	2.46E-02
112	GO:0010118: stomatal movement	2.46E-02
113	GO:0048653: anther development	2.46E-02
114	GO:0010182: sugar mediated signaling pathway	2.59E-02
115	GO:0010305: leaf vascular tissue pattern formation	2.59E-02
116	GO:0009958: positive gravitropism	2.59E-02
117	GO:0006468: protein phosphorylation	2.64E-02
118	GO:0009793: embryo development ending in seed dormancy	2.65E-02
119	GO:0006814: sodium ion transport	2.73E-02
120	GO:0042752: regulation of circadian rhythm	2.73E-02
121	GO:0009058: biosynthetic process	2.76E-02
122	GO:0071554: cell wall organization or biogenesis	3.01E-02
123	GO:0032502: developmental process	3.16E-02
124	GO:0010583: response to cyclopentenone	3.16E-02
125	GO:0007267: cell-cell signaling	3.61E-02
126	GO:0051607: defense response to virus	3.76E-02
127	GO:0000910: cytokinesis	3.76E-02
128	GO:0009615: response to virus	3.92E-02
129	GO:0016126: sterol biosynthetic process	3.92E-02
130	GO:0016567: protein ubiquitination	4.37E-02
131	GO:0010411: xyloglucan metabolic process	4.40E-02
132	GO:0016311: dephosphorylation	4.56E-02
133	GO:0071555: cell wall organization	4.81E-02
134	GO:0000160: phosphorelay signal transduction system	4.90E-02
135	GO:0010311: lateral root formation	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0071633: dihydroceramidase activity	0.00E+00
2	GO:0047661: amino-acid racemase activity	0.00E+00
3	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
4	GO:0047793: cycloeucalenol cycloisomerase activity	0.00E+00
5	GO:0015267: channel activity	0.00E+00
6	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
7	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
8	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
9	GO:0046905: phytoene synthase activity	0.00E+00
10	GO:0001872: (1->3)-beta-D-glucan binding	3.30E-05
11	GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	3.02E-04
12	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	3.02E-04
13	GO:0005227: calcium activated cation channel activity	3.02E-04
14	GO:0051996: squalene synthase activity	3.02E-04
15	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	6.60E-04
16	GO:0050017: L-3-cyanoalanine synthase activity	6.60E-04
17	GO:0004103: choline kinase activity	6.60E-04
18	GO:0043425: bHLH transcription factor binding	6.60E-04
19	GO:0004750: ribulose-phosphate 3-epimerase activity	6.60E-04
20	GO:0008805: carbon-monoxide oxygenase activity	6.60E-04
21	GO:1901981: phosphatidylinositol phosphate binding	6.60E-04
22	GO:0031072: heat shock protein binding	9.29E-04
23	GO:0005262: calcium channel activity	9.29E-04
24	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.07E-03
25	GO:0016149: translation release factor activity, codon specific	1.53E-03
26	GO:0008508: bile acid:sodium symporter activity	1.53E-03
27	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.06E-03
28	GO:0019199: transmembrane receptor protein kinase activity	2.06E-03
29	GO:0008725: DNA-3-methyladenine glycosylase activity	2.63E-03
30	GO:0003777: microtubule motor activity	2.71E-03
31	GO:0016208: AMP binding	3.24E-03
32	GO:0030983: mismatched DNA binding	3.24E-03
33	GO:0004124: cysteine synthase activity	3.90E-03
34	GO:0016832: aldehyde-lyase activity	3.90E-03
35	GO:0004871: signal transducer activity	5.63E-03
36	GO:0030247: polysaccharide binding	5.97E-03
37	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.85E-03
38	GO:0003747: translation release factor activity	6.95E-03
39	GO:0009055: electron carrier activity	8.02E-03
40	GO:0004519: endonuclease activity	8.19E-03
41	GO:0015095: magnesium ion transmembrane transporter activity	1.16E-02
42	GO:0043621: protein self-association	1.17E-02
43	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.26E-02
44	GO:0003712: transcription cofactor activity	1.37E-02
45	GO:0008146: sulfotransferase activity	1.37E-02
46	GO:0016298: lipase activity	1.52E-02
47	GO:0051536: iron-sulfur cluster binding	1.59E-02
48	GO:0005528: FK506 binding	1.59E-02
49	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.79E-02
50	GO:0004176: ATP-dependent peptidase activity	1.82E-02
51	GO:0033612: receptor serine/threonine kinase binding	1.82E-02
52	GO:0052689: carboxylic ester hydrolase activity	1.95E-02
53	GO:0051082: unfolded protein binding	2.09E-02
54	GO:0004674: protein serine/threonine kinase activity	2.09E-02
55	GO:0015035: protein disulfide oxidoreductase activity	2.15E-02
56	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.20E-02
57	GO:0003756: protein disulfide isomerase activity	2.20E-02
58	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.59E-02
59	GO:0001085: RNA polymerase II transcription factor binding	2.59E-02
60	GO:0046983: protein dimerization activity	2.68E-02
61	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.69E-02
62	GO:0050662: coenzyme binding	2.73E-02
63	GO:0016853: isomerase activity	2.73E-02
64	GO:0019901: protein kinase binding	2.87E-02
65	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.01E-02
66	GO:0004518: nuclease activity	3.16E-02
67	GO:0000156: phosphorelay response regulator activity	3.31E-02
68	GO:0051015: actin filament binding	3.31E-02
69	GO:0003684: damaged DNA binding	3.46E-02
70	GO:0005200: structural constituent of cytoskeleton	3.61E-02
71	GO:0008237: metallopeptidase activity	3.61E-02
72	GO:0016413: O-acetyltransferase activity	3.76E-02
73	GO:0016597: amino acid binding	3.76E-02
74	GO:0008017: microtubule binding	3.77E-02
75	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.40E-02
76	GO:0016887: ATPase activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.21E-05
2	GO:0032541: cortical endoplasmic reticulum	3.02E-04
3	GO:0031357: integral component of chloroplast inner membrane	6.60E-04
4	GO:0009508: plastid chromosome	9.29E-04
5	GO:0009528: plastid inner membrane	1.07E-03
6	GO:0030139: endocytic vesicle	1.07E-03
7	GO:0009941: chloroplast envelope	1.23E-03
8	GO:0032585: multivesicular body membrane	1.53E-03
9	GO:0032432: actin filament bundle	1.53E-03
10	GO:0009527: plastid outer membrane	2.06E-03
11	GO:0009898: cytoplasmic side of plasma membrane	2.06E-03
12	GO:0046658: anchored component of plasma membrane	2.26E-03
13	GO:0005871: kinesin complex	2.44E-03
14	GO:0005886: plasma membrane	3.26E-03
15	GO:0031969: chloroplast membrane	3.98E-03
16	GO:0010319: stromule	4.51E-03
17	GO:0009295: nucleoid	4.51E-03
18	GO:0009986: cell surface	4.60E-03
19	GO:0009707: chloroplast outer membrane	6.61E-03
20	GO:0009535: chloroplast thylakoid membrane	9.37E-03
21	GO:0005884: actin filament	9.63E-03
22	GO:0031225: anchored component of membrane	1.05E-02
23	GO:0030095: chloroplast photosystem II	1.26E-02
24	GO:0009654: photosystem II oxygen evolving complex	1.71E-02
25	GO:0009532: plastid stroma	1.82E-02
26	GO:0015629: actin cytoskeleton	2.07E-02
27	GO:0009534: chloroplast thylakoid	2.27E-02
28	GO:0009543: chloroplast thylakoid lumen	2.62E-02
29	GO:0019898: extrinsic component of membrane	2.87E-02
30	GO:0005778: peroxisomal membrane	3.61E-02
31	GO:0009570: chloroplast stroma	3.91E-02
32	GO:0005667: transcription factor complex	4.24E-02