GO Enrichment Analysis of Co-expressed Genes with
AT5G02670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 2 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 3 | GO:0019685: photosynthesis, dark reaction | 0.00E+00 |
| 4 | GO:0043489: RNA stabilization | 4.18E-05 |
| 5 | GO:0010266: response to vitamin B1 | 4.18E-05 |
| 6 | GO:0043609: regulation of carbon utilization | 4.18E-05 |
| 7 | GO:0006436: tryptophanyl-tRNA aminoacylation | 4.18E-05 |
| 8 | GO:0051171: regulation of nitrogen compound metabolic process | 4.18E-05 |
| 9 | GO:0006435: threonyl-tRNA aminoacylation | 1.04E-04 |
| 10 | GO:0016045: detection of bacterium | 1.78E-04 |
| 11 | GO:0045493: xylan catabolic process | 1.78E-04 |
| 12 | GO:0006000: fructose metabolic process | 1.78E-04 |
| 13 | GO:0010255: glucose mediated signaling pathway | 2.63E-04 |
| 14 | GO:2001141: regulation of RNA biosynthetic process | 2.63E-04 |
| 15 | GO:0009229: thiamine diphosphate biosynthetic process | 4.50E-04 |
| 16 | GO:0006465: signal peptide processing | 4.50E-04 |
| 17 | GO:0042793: transcription from plastid promoter | 5.51E-04 |
| 18 | GO:0009228: thiamine biosynthetic process | 5.51E-04 |
| 19 | GO:0006508: proteolysis | 9.79E-04 |
| 20 | GO:0006002: fructose 6-phosphate metabolic process | 1.00E-03 |
| 21 | GO:0071482: cellular response to light stimulus | 1.00E-03 |
| 22 | GO:0000373: Group II intron splicing | 1.13E-03 |
| 23 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.25E-03 |
| 24 | GO:0006535: cysteine biosynthetic process from serine | 1.39E-03 |
| 25 | GO:0006352: DNA-templated transcription, initiation | 1.53E-03 |
| 26 | GO:0006289: nucleotide-excision repair | 2.46E-03 |
| 27 | GO:0019344: cysteine biosynthetic process | 2.46E-03 |
| 28 | GO:0010187: negative regulation of seed germination | 2.46E-03 |
| 29 | GO:0010073: meristem maintenance | 2.62E-03 |
| 30 | GO:0006418: tRNA aminoacylation for protein translation | 2.62E-03 |
| 31 | GO:0015992: proton transport | 2.80E-03 |
| 32 | GO:0009793: embryo development ending in seed dormancy | 2.86E-03 |
| 33 | GO:0048868: pollen tube development | 3.91E-03 |
| 34 | GO:0010411: xyloglucan metabolic process | 6.50E-03 |
| 35 | GO:0048481: plant ovule development | 6.98E-03 |
| 36 | GO:0006397: mRNA processing | 7.08E-03 |
| 37 | GO:0006499: N-terminal protein myristoylation | 7.47E-03 |
| 38 | GO:0009910: negative regulation of flower development | 7.72E-03 |
| 39 | GO:0009631: cold acclimation | 7.72E-03 |
| 40 | GO:0006839: mitochondrial transport | 9.01E-03 |
| 41 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.24E-02 |
| 42 | GO:0009740: gibberellic acid mediated signaling pathway | 1.49E-02 |
| 43 | GO:0009553: embryo sac development | 1.52E-02 |
| 44 | GO:0006396: RNA processing | 1.59E-02 |
| 45 | GO:0042744: hydrogen peroxide catabolic process | 2.00E-02 |
| 46 | GO:0009790: embryo development | 2.03E-02 |
| 47 | GO:0040008: regulation of growth | 2.22E-02 |
| 48 | GO:0007623: circadian rhythm | 2.29E-02 |
| 49 | GO:0009451: RNA modification | 2.33E-02 |
| 50 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.48E-02 |
| 51 | GO:0008380: RNA splicing | 2.60E-02 |
| 52 | GO:0010468: regulation of gene expression | 2.60E-02 |
| 53 | GO:0006810: transport | 3.60E-02 |
| 54 | GO:0080167: response to karrikin | 3.65E-02 |
| 55 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.74E-02 |
| 56 | GO:0010200: response to chitin | 3.74E-02 |
| 57 | GO:0046686: response to cadmium ion | 3.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 3 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 4 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 5 | GO:0004830: tryptophan-tRNA ligase activity | 4.18E-05 |
| 6 | GO:0004829: threonine-tRNA ligase activity | 1.04E-04 |
| 7 | GO:0050017: L-3-cyanoalanine synthase activity | 1.04E-04 |
| 8 | GO:0080041: ADP-ribose pyrophosphohydrolase activity | 1.04E-04 |
| 9 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.04E-04 |
| 10 | GO:0032549: ribonucleoside binding | 1.78E-04 |
| 11 | GO:0016805: dipeptidase activity | 1.78E-04 |
| 12 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 2.63E-04 |
| 13 | GO:0008237: metallopeptidase activity | 3.27E-04 |
| 14 | GO:0070628: proteasome binding | 3.53E-04 |
| 15 | GO:0009044: xylan 1,4-beta-xylosidase activity | 3.53E-04 |
| 16 | GO:0046556: alpha-L-arabinofuranosidase activity | 3.53E-04 |
| 17 | GO:0001053: plastid sigma factor activity | 3.53E-04 |
| 18 | GO:0016987: sigma factor activity | 3.53E-04 |
| 19 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 4.50E-04 |
| 20 | GO:0004222: metalloendopeptidase activity | 5.25E-04 |
| 21 | GO:0031593: polyubiquitin binding | 5.51E-04 |
| 22 | GO:2001070: starch binding | 5.51E-04 |
| 23 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.58E-04 |
| 24 | GO:0004124: cysteine synthase activity | 6.58E-04 |
| 25 | GO:0004427: inorganic diphosphatase activity | 7.69E-04 |
| 26 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.01E-03 |
| 27 | GO:0001054: RNA polymerase I activity | 1.53E-03 |
| 28 | GO:0008266: poly(U) RNA binding | 1.97E-03 |
| 29 | GO:0051536: iron-sulfur cluster binding | 2.46E-03 |
| 30 | GO:0031418: L-ascorbic acid binding | 2.46E-03 |
| 31 | GO:0043130: ubiquitin binding | 2.46E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 2.80E-03 |
| 33 | GO:0004812: aminoacyl-tRNA ligase activity | 3.52E-03 |
| 34 | GO:0008536: Ran GTPase binding | 3.91E-03 |
| 35 | GO:0001085: RNA polymerase II transcription factor binding | 3.91E-03 |
| 36 | GO:0003682: chromatin binding | 3.93E-03 |
| 37 | GO:0010181: FMN binding | 4.11E-03 |
| 38 | GO:0003684: damaged DNA binding | 5.15E-03 |
| 39 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 7.72E-03 |
| 40 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.01E-03 |
| 41 | GO:0004185: serine-type carboxypeptidase activity | 9.82E-03 |
| 42 | GO:0030246: carbohydrate binding | 1.63E-02 |
| 43 | GO:0019843: rRNA binding | 1.82E-02 |
| 44 | GO:0016829: lyase activity | 1.93E-02 |
| 45 | GO:0030170: pyridoxal phosphate binding | 1.96E-02 |
| 46 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.00E-02 |
| 47 | GO:0046872: metal ion binding | 2.67E-02 |
| 48 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.72E-02 |
| 49 | GO:0004601: peroxidase activity | 3.13E-02 |
| 50 | GO:0004672: protein kinase activity | 3.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.04E-06 |
| 2 | GO:0030529: intracellular ribonucleoprotein complex | 3.67E-04 |
| 3 | GO:0009570: chloroplast stroma | 9.43E-04 |
| 4 | GO:0005736: DNA-directed RNA polymerase I complex | 1.13E-03 |
| 5 | GO:0009508: plastid chromosome | 1.82E-03 |
| 6 | GO:0009532: plastid stroma | 2.80E-03 |
| 7 | GO:0009295: nucleoid | 5.36E-03 |
| 8 | GO:0005667: transcription factor complex | 6.27E-03 |
| 9 | GO:0009941: chloroplast envelope | 3.21E-02 |
| 10 | GO:0000139: Golgi membrane | 3.32E-02 |
| 11 | GO:0031969: chloroplast membrane | 3.65E-02 |
| 12 | GO:0005773: vacuole | 3.73E-02 |
| 13 | GO:0005789: endoplasmic reticulum membrane | 3.74E-02 |
| 14 | GO:0005743: mitochondrial inner membrane | 4.57E-02 |