co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02620

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0010398: xylogalacturonan metabolic process	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
5	GO:0006083: acetate metabolic process	5.48E-05
6	GO:0010272: response to silver ion	2.28E-04
7	GO:0061158: 3'-UTR-mediated mRNA destabilization	2.28E-04
8	GO:0000187: activation of MAPK activity	3.33E-04
9	GO:0010188: response to microbial phytotoxin	4.45E-04
10	GO:0006564: L-serine biosynthetic process	5.66E-04
11	GO:0009627: systemic acquired resistance	5.76E-04
12	GO:0016311: dephosphorylation	6.38E-04
13	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	6.92E-04
14	GO:0060918: auxin transport	6.92E-04
15	GO:0009407: toxin catabolic process	7.35E-04
16	GO:0009099: valine biosynthetic process	8.25E-04
17	GO:0030643: cellular phosphate ion homeostasis	8.25E-04
18	GO:0009082: branched-chain amino acid biosynthetic process	8.25E-04
19	GO:0071669: plant-type cell wall organization or biogenesis	9.62E-04
20	GO:0042542: response to hydrogen peroxide	1.03E-03
21	GO:0009819: drought recovery	1.11E-03
22	GO:0009657: plastid organization	1.26E-03
23	GO:0009097: isoleucine biosynthetic process	1.26E-03
24	GO:0009751: response to salicylic acid	1.39E-03
25	GO:0009098: leucine biosynthetic process	1.58E-03
26	GO:0006032: chitin catabolic process	1.75E-03
27	GO:0000272: polysaccharide catabolic process	1.93E-03
28	GO:0071365: cellular response to auxin stimulus	2.11E-03
29	GO:0010102: lateral root morphogenesis	2.30E-03
30	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	2.30E-03
31	GO:0009266: response to temperature stimulus	2.49E-03
32	GO:0000162: tryptophan biosynthetic process	2.90E-03
33	GO:0034976: response to endoplasmic reticulum stress	2.90E-03
34	GO:0010073: meristem maintenance	3.32E-03
35	GO:0016998: cell wall macromolecule catabolic process	3.54E-03
36	GO:0030245: cellulose catabolic process	3.77E-03
37	GO:0009814: defense response, incompatible interaction	3.77E-03
38	GO:0030433: ubiquitin-dependent ERAD pathway	3.77E-03
39	GO:0010227: floral organ abscission	4.00E-03
40	GO:0016117: carotenoid biosynthetic process	4.47E-03
41	GO:0010051: xylem and phloem pattern formation	4.71E-03
42	GO:0042631: cellular response to water deprivation	4.71E-03
43	GO:0006662: glycerol ether metabolic process	4.96E-03
44	GO:0045489: pectin biosynthetic process	4.96E-03
45	GO:0055114: oxidation-reduction process	5.42E-03
46	GO:0006623: protein targeting to vacuole	5.48E-03
47	GO:0010193: response to ozone	5.74E-03
48	GO:0030163: protein catabolic process	6.27E-03
49	GO:0006464: cellular protein modification process	6.55E-03
50	GO:0051607: defense response to virus	7.11E-03
51	GO:0006979: response to oxidative stress	7.19E-03
52	GO:0009615: response to virus	7.40E-03
53	GO:0045454: cell redox homeostasis	7.82E-03
54	GO:0009631: cold acclimation	9.86E-03
55	GO:0045087: innate immune response	1.05E-02
56	GO:0034599: cellular response to oxidative stress	1.09E-02
57	GO:0006631: fatty acid metabolic process	1.19E-02
58	GO:0046686: response to cadmium ion	1.25E-02
59	GO:0000209: protein polyubiquitination	1.29E-02
60	GO:0009644: response to high light intensity	1.33E-02
61	GO:0009636: response to toxic substance	1.37E-02
62	GO:0000165: MAPK cascade	1.44E-02
63	GO:0031347: regulation of defense response	1.44E-02
64	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.44E-02
65	GO:0016036: cellular response to phosphate starvation	2.80E-02
66	GO:0010150: leaf senescence	2.94E-02
67	GO:0045490: pectin catabolic process	2.94E-02
68	GO:0006468: protein phosphorylation	3.01E-02
69	GO:0010468: regulation of gene expression	3.34E-02
70	GO:0071555: cell wall organization	3.48E-02
71	GO:0009658: chloroplast organization	4.01E-02
72	GO:0006970: response to osmotic stress	4.23E-02
73	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.79E-02
74	GO:0046777: protein autophosphorylation	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0016504: peptidase activator activity	0.00E+00
2	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
3	GO:0070577: lysine-acetylated histone binding	0.00E+00
4	GO:0003987: acetate-CoA ligase activity	5.48E-05
5	GO:0004425: indole-3-glycerol-phosphate synthase activity	5.48E-05
6	GO:0004617: phosphoglycerate dehydrogenase activity	1.34E-04
7	GO:1990585: hydroxyproline O-arabinosyltransferase activity	1.34E-04
8	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	2.28E-04
9	GO:0052656: L-isoleucine transaminase activity	3.33E-04
10	GO:0052654: L-leucine transaminase activity	3.33E-04
11	GO:0052655: L-valine transaminase activity	3.33E-04
12	GO:0004416: hydroxyacylglutathione hydrolase activity	3.33E-04
13	GO:0009916: alternative oxidase activity	4.45E-04
14	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	4.45E-04
15	GO:0004084: branched-chain-amino-acid transaminase activity	4.45E-04
16	GO:0070628: proteasome binding	4.45E-04
17	GO:0004040: amidase activity	5.66E-04
18	GO:0016208: AMP binding	6.92E-04
19	GO:0035252: UDP-xylosyltransferase activity	6.92E-04
20	GO:0003993: acid phosphatase activity	8.75E-04
21	GO:0043295: glutathione binding	9.62E-04
22	GO:0004364: glutathione transferase activity	1.03E-03
23	GO:0004708: MAP kinase kinase activity	1.11E-03
24	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.11E-03
25	GO:0004568: chitinase activity	1.75E-03
26	GO:0031624: ubiquitin conjugating enzyme binding	2.49E-03
27	GO:0004190: aspartic-type endopeptidase activity	2.70E-03
28	GO:0008061: chitin binding	2.70E-03
29	GO:0008810: cellulase activity	4.00E-03
30	GO:0003727: single-stranded RNA binding	4.23E-03
31	GO:0003756: protein disulfide isomerase activity	4.23E-03
32	GO:0047134: protein-disulfide reductase activity	4.47E-03
33	GO:0001085: RNA polymerase II transcription factor binding	4.96E-03
34	GO:0004791: thioredoxin-disulfide reductase activity	5.22E-03
35	GO:0010181: FMN binding	5.22E-03
36	GO:0004601: peroxidase activity	5.28E-03
37	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	6.27E-03
38	GO:0016791: phosphatase activity	6.55E-03
39	GO:0016722: oxidoreductase activity, oxidizing metal ions	6.83E-03
40	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.83E-03
41	GO:0016597: amino acid binding	7.11E-03
42	GO:0004722: protein serine/threonine phosphatase activity	8.58E-03
43	GO:0016757: transferase activity, transferring glycosyl groups	8.81E-03
44	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	9.86E-03
45	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.12E-02
46	GO:0051287: NAD binding	1.44E-02
47	GO:0004674: protein serine/threonine kinase activity	1.54E-02
48	GO:0016298: lipase activity	1.59E-02
49	GO:0031625: ubiquitin protein ligase binding	1.67E-02
50	GO:0015035: protein disulfide oxidoreductase activity	2.04E-02
51	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.27E-02
52	GO:0005507: copper ion binding	2.45E-02
53	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.57E-02
54	GO:0008194: UDP-glycosyltransferase activity	3.19E-02
55	GO:0016301: kinase activity	3.44E-02
56	GO:0003824: catalytic activity	3.82E-02
57	GO:0003682: chromatin binding	4.18E-02
58	GO:0050660: flavin adenine dinucleotide binding	4.45E-02
59	GO:0061630: ubiquitin protein ligase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0046862: chromoplast membrane	0.00E+00
2	GO:0005794: Golgi apparatus	4.79E-04
3	GO:0009986: cell surface	9.62E-04
4	GO:0005802: trans-Golgi network	9.73E-04
5	GO:0005768: endosome	1.18E-03
6	GO:0009514: glyoxysome	1.26E-03
7	GO:0030665: clathrin-coated vesicle membrane	1.58E-03
8	GO:0017119: Golgi transport complex	1.75E-03
9	GO:0070469: respiratory chain	3.32E-03
10	GO:0005839: proteasome core complex	3.54E-03
11	GO:0016592: mediator complex	6.00E-03
12	GO:0005788: endoplasmic reticulum lumen	7.69E-03
13	GO:0005667: transcription factor complex	7.99E-03
14	GO:0000151: ubiquitin ligase complex	8.91E-03
15	GO:0005774: vacuolar membrane	9.05E-03
16	GO:0005829: cytosol	1.01E-02
17	GO:0031902: late endosome membrane	1.19E-02
18	GO:0005886: plasma membrane	1.61E-02
19	GO:0005773: vacuole	1.72E-02
20	GO:0009570: chloroplast stroma	2.36E-02
21	GO:0005783: endoplasmic reticulum	2.59E-02
22	GO:0048046: apoplast	3.62E-02
23	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	4.29E-02
24	GO:0009505: plant-type cell wall	4.35E-02
25	GO:0000139: Golgi membrane	4.69E-02
26	GO:0016021: integral component of membrane	4.81E-02