co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000819: sister chromatid segregation	0.00E+00
2	GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement	0.00E+00
3	GO:0044774: mitotic DNA integrity checkpoint	0.00E+00
4	GO:0042352: GDP-L-fucose salvage	0.00E+00
5	GO:0061157: mRNA destabilization	0.00E+00
6	GO:0009734: auxin-activated signaling pathway	5.06E-06
7	GO:0043039: tRNA aminoacylation	1.45E-05
8	GO:0009733: response to auxin	2.42E-05
9	GO:0046620: regulation of organ growth	3.96E-05
10	GO:0010583: response to cyclopentenone	1.92E-04
11	GO:0010588: cotyledon vascular tissue pattern formation	2.28E-04
12	GO:0048497: maintenance of floral organ identity	2.67E-04
13	GO:0000025: maltose catabolic process	5.77E-04
14	GO:0030198: extracellular matrix organization	5.77E-04
15	GO:0006438: valyl-tRNA aminoacylation	5.77E-04
16	GO:0046520: sphingoid biosynthetic process	5.77E-04
17	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	5.77E-04
18	GO:0046506: sulfolipid biosynthetic process	5.77E-04
19	GO:0010480: microsporocyte differentiation	5.77E-04
20	GO:0006426: glycyl-tRNA aminoacylation	5.77E-04
21	GO:0051641: cellular localization	5.77E-04
22	GO:0015904: tetracycline transport	5.77E-04
23	GO:0048016: inositol phosphate-mediated signaling	5.77E-04
24	GO:0006434: seryl-tRNA aminoacylation	5.77E-04
25	GO:0009686: gibberellin biosynthetic process	6.84E-04
26	GO:0016042: lipid catabolic process	8.00E-04
27	GO:0006351: transcription, DNA-templated	8.40E-04
28	GO:0007018: microtubule-based movement	1.12E-03
29	GO:1901529: positive regulation of anion channel activity	1.24E-03
30	GO:0006741: NADP biosynthetic process	1.24E-03
31	GO:0080005: photosystem stoichiometry adjustment	1.24E-03
32	GO:0061062: regulation of nematode larval development	1.24E-03
33	GO:0018026: peptidyl-lysine monomethylation	1.24E-03
34	GO:0071497: cellular response to freezing	1.24E-03
35	GO:0009786: regulation of asymmetric cell division	1.24E-03
36	GO:0031648: protein destabilization	1.24E-03
37	GO:2000123: positive regulation of stomatal complex development	1.24E-03
38	GO:1900865: chloroplast RNA modification	1.36E-03
39	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.45E-03
40	GO:0048829: root cap development	1.59E-03
41	GO:0006949: syncytium formation	1.59E-03
42	GO:0048229: gametophyte development	1.84E-03
43	GO:0033591: response to L-ascorbic acid	2.04E-03
44	GO:1902448: positive regulation of shade avoidance	2.04E-03
45	GO:0042218: 1-aminocyclopropane-1-carboxylate biosynthetic process	2.04E-03
46	GO:0030261: chromosome condensation	2.04E-03
47	GO:0019674: NAD metabolic process	2.04E-03
48	GO:0090506: axillary shoot meristem initiation	2.04E-03
49	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	2.04E-03
50	GO:0006355: regulation of transcription, DNA-templated	2.08E-03
51	GO:0005983: starch catabolic process	2.11E-03
52	GO:2000012: regulation of auxin polar transport	2.40E-03
53	GO:0010102: lateral root morphogenesis	2.40E-03
54	GO:0010020: chloroplast fission	2.71E-03
55	GO:0043207: response to external biotic stimulus	2.96E-03
56	GO:0007276: gamete generation	2.96E-03
57	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.96E-03
58	GO:0006424: glutamyl-tRNA aminoacylation	2.96E-03
59	GO:0016556: mRNA modification	2.96E-03
60	GO:0009558: embryo sac cellularization	2.96E-03
61	GO:0010321: regulation of vegetative phase change	2.96E-03
62	GO:0019363: pyridine nucleotide biosynthetic process	2.96E-03
63	GO:0000914: phragmoplast assembly	4.00E-03
64	GO:0031122: cytoplasmic microtubule organization	4.00E-03
65	GO:2000038: regulation of stomatal complex development	4.00E-03
66	GO:0007020: microtubule nucleation	4.00E-03
67	GO:0042991: transcription factor import into nucleus	4.00E-03
68	GO:1902347: response to strigolactone	4.00E-03
69	GO:0042938: dipeptide transport	4.00E-03
70	GO:0006808: regulation of nitrogen utilization	4.00E-03
71	GO:1901141: regulation of lignin biosynthetic process	4.00E-03
72	GO:0048629: trichome patterning	4.00E-03
73	GO:0019953: sexual reproduction	4.15E-03
74	GO:0007005: mitochondrion organization	5.01E-03
75	GO:0032957: inositol trisphosphate metabolic process	5.13E-03
76	GO:0010375: stomatal complex patterning	5.13E-03
77	GO:0009247: glycolipid biosynthetic process	5.13E-03
78	GO:0046785: microtubule polymerization	5.13E-03
79	GO:0045487: gibberellin catabolic process	5.13E-03
80	GO:0007094: mitotic spindle assembly checkpoint	5.13E-03
81	GO:0009926: auxin polar transport	5.65E-03
82	GO:0040008: regulation of growth	6.11E-03
83	GO:0016554: cytidine to uridine editing	6.36E-03
84	GO:0009913: epidermal cell differentiation	6.36E-03
85	GO:1902456: regulation of stomatal opening	6.36E-03
86	GO:0042793: transcription from plastid promoter	6.36E-03
87	GO:0018258: protein O-linked glycosylation via hydroxyproline	6.36E-03
88	GO:0046855: inositol phosphate dephosphorylation	6.36E-03
89	GO:0010405: arabinogalactan protein metabolic process	6.36E-03
90	GO:0009959: negative gravitropism	6.36E-03
91	GO:0009793: embryo development ending in seed dormancy	6.79E-03
92	GO:0010305: leaf vascular tissue pattern formation	7.53E-03
93	GO:0010182: sugar mediated signaling pathway	7.53E-03
94	GO:0010067: procambium histogenesis	7.69E-03
95	GO:2000033: regulation of seed dormancy process	7.69E-03
96	GO:0030488: tRNA methylation	7.69E-03
97	GO:0006470: protein dephosphorylation	8.05E-03
98	GO:0009736: cytokinin-activated signaling pathway	8.28E-03
99	GO:0048825: cotyledon development	8.70E-03
100	GO:1900056: negative regulation of leaf senescence	9.10E-03
101	GO:0030497: fatty acid elongation	9.10E-03
102	GO:0048437: floral organ development	9.10E-03
103	GO:0010098: suspensor development	9.10E-03
104	GO:0030307: positive regulation of cell growth	9.10E-03
105	GO:0010103: stomatal complex morphogenesis	9.10E-03
106	GO:0000712: resolution of meiotic recombination intermediates	9.10E-03
107	GO:0010161: red light signaling pathway	9.10E-03
108	GO:0045995: regulation of embryonic development	9.10E-03
109	GO:0009416: response to light stimulus	9.10E-03
110	GO:0071554: cell wall organization or biogenesis	9.32E-03
111	GO:0009704: de-etiolation	1.06E-02
112	GO:0010492: maintenance of shoot apical meristem identity	1.06E-02
113	GO:0000105: histidine biosynthetic process	1.06E-02
114	GO:0009828: plant-type cell wall loosening	1.13E-02
115	GO:0006468: protein phosphorylation	1.13E-02
116	GO:0009740: gibberellic acid mediated signaling pathway	1.20E-02
117	GO:0010100: negative regulation of photomorphogenesis	1.22E-02
118	GO:0006526: arginine biosynthetic process	1.22E-02
119	GO:0010099: regulation of photomorphogenesis	1.22E-02
120	GO:0000910: cytokinesis	1.28E-02
121	GO:0009658: chloroplast organization	1.28E-02
122	GO:0009624: response to nematode	1.30E-02
123	GO:0010027: thylakoid membrane organization	1.36E-02
124	GO:0051865: protein autoubiquitination	1.39E-02
125	GO:0006783: heme biosynthetic process	1.39E-02
126	GO:0000902: cell morphogenesis	1.39E-02
127	GO:0009835: fruit ripening	1.39E-02
128	GO:0009638: phototropism	1.56E-02
129	GO:0006779: porphyrin-containing compound biosynthetic process	1.56E-02
130	GO:0031425: chloroplast RNA processing	1.56E-02
131	GO:0007346: regulation of mitotic cell cycle	1.56E-02
132	GO:0005982: starch metabolic process	1.56E-02
133	GO:0015995: chlorophyll biosynthetic process	1.60E-02
134	GO:0016311: dephosphorylation	1.69E-02
135	GO:0010162: seed dormancy process	1.74E-02
136	GO:0006782: protoporphyrinogen IX biosynthetic process	1.74E-02
137	GO:0009641: shade avoidance	1.74E-02
138	GO:0006259: DNA metabolic process	1.74E-02
139	GO:0048481: plant ovule development	1.77E-02
140	GO:0000160: phosphorelay signal transduction system	1.86E-02
141	GO:0006265: DNA topological change	1.93E-02
142	GO:0009073: aromatic amino acid family biosynthetic process	1.93E-02
143	GO:0008285: negative regulation of cell proliferation	1.93E-02
144	GO:0046856: phosphatidylinositol dephosphorylation	1.93E-02
145	GO:0006312: mitotic recombination	2.13E-02
146	GO:0015706: nitrate transport	2.13E-02
147	GO:0006865: amino acid transport	2.15E-02
148	GO:0009785: blue light signaling pathway	2.33E-02
149	GO:0010628: positive regulation of gene expression	2.33E-02
150	GO:0009691: cytokinin biosynthetic process	2.33E-02
151	GO:0006006: glucose metabolic process	2.33E-02
152	GO:0010075: regulation of meristem growth	2.33E-02
153	GO:0009767: photosynthetic electron transport chain	2.33E-02
154	GO:0045892: negative regulation of transcription, DNA-templated	2.36E-02
155	GO:0048768: root hair cell tip growth	2.54E-02
156	GO:0007034: vacuolar transport	2.54E-02
157	GO:0010223: secondary shoot formation	2.54E-02
158	GO:0009887: animal organ morphogenesis	2.54E-02
159	GO:0009266: response to temperature stimulus	2.54E-02
160	GO:0009934: regulation of meristem structural organization	2.54E-02
161	GO:0006302: double-strand break repair	2.54E-02
162	GO:0080188: RNA-directed DNA methylation	2.76E-02
163	GO:0090351: seedling development	2.76E-02
164	GO:0009640: photomorphogenesis	2.91E-02
165	GO:0000162: tryptophan biosynthetic process	2.98E-02
166	GO:0006636: unsaturated fatty acid biosynthetic process	2.98E-02
167	GO:0006863: purine nucleobase transport	2.98E-02
168	GO:0010187: negative regulation of seed germination	3.21E-02
169	GO:0006418: tRNA aminoacylation for protein translation	3.44E-02
170	GO:0009664: plant-type cell wall organization	3.65E-02
171	GO:0048278: vesicle docking	3.68E-02
172	GO:0051321: meiotic cell cycle	3.68E-02
173	GO:0016114: terpenoid biosynthetic process	3.68E-02
174	GO:0003333: amino acid transmembrane transport	3.68E-02
175	GO:0048511: rhythmic process	3.68E-02
176	GO:2000022: regulation of jasmonic acid mediated signaling pathway	3.93E-02
177	GO:0009693: ethylene biosynthetic process	4.18E-02
178	GO:0071215: cellular response to abscisic acid stimulus	4.18E-02
179	GO:0010082: regulation of root meristem growth	4.18E-02
180	GO:0001944: vasculature development	4.18E-02
181	GO:0009826: unidimensional cell growth	4.27E-02
182	GO:0045492: xylan biosynthetic process	4.43E-02
183	GO:0010091: trichome branching	4.43E-02
184	GO:0042127: regulation of cell proliferation	4.43E-02
185	GO:0080022: primary root development	4.96E-02
186	GO:0008033: tRNA processing	4.96E-02
187	GO:0010051: xylem and phloem pattern formation	4.96E-02
188	GO:0010087: phloem or xylem histogenesis	4.96E-02
189	GO:0010118: stomatal movement	4.96E-02
190	GO:0048653: anther development	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0051752: phosphoglucan, water dikinase activity	0.00E+00
2	GO:0071633: dihydroceramidase activity	0.00E+00
3	GO:0050201: fucokinase activity	0.00E+00
4	GO:0046510: UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity	0.00E+00
5	GO:0047661: amino-acid racemase activity	0.00E+00
6	GO:0009899: ent-kaurene synthase activity	0.00E+00
7	GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity	0.00E+00
8	GO:0008922: long-chain fatty acid [acyl-carrier-protein] ligase activity	0.00E+00
9	GO:0005201: extracellular matrix structural constituent	0.00E+00
10	GO:0047341: fucose-1-phosphate guanylyltransferase activity	0.00E+00
11	GO:0003777: microtubule motor activity	3.78E-04
12	GO:0004176: ATP-dependent peptidase activity	5.44E-04
13	GO:0004828: serine-tRNA ligase activity	5.77E-04
14	GO:0046030: inositol trisphosphate phosphatase activity	5.77E-04
15	GO:0004134: 4-alpha-glucanotransferase activity	5.77E-04
16	GO:0004818: glutamate-tRNA ligase activity	5.77E-04
17	GO:0009374: biotin binding	5.77E-04
18	GO:0052381: tRNA dimethylallyltransferase activity	5.77E-04
19	GO:0010313: phytochrome binding	5.77E-04
20	GO:0004832: valine-tRNA ligase activity	5.77E-04
21	GO:0004820: glycine-tRNA ligase activity	5.77E-04
22	GO:0042736: NADH kinase activity	5.77E-04
23	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	5.77E-04
24	GO:0000170: sphingosine hydroxylase activity	5.77E-04
25	GO:0050139: nicotinate-N-glucosyltransferase activity	5.77E-04
26	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	5.77E-04
27	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	5.77E-04
28	GO:0042284: sphingolipid delta-4 desaturase activity	1.24E-03
29	GO:0008493: tetracycline transporter activity	1.24E-03
30	GO:0019200: carbohydrate kinase activity	1.24E-03
31	GO:0045543: gibberellin 2-beta-dioxygenase activity	1.24E-03
32	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.24E-03
33	GO:0052689: carboxylic ester hydrolase activity	1.65E-03
34	GO:0008237: metallopeptidase activity	1.84E-03
35	GO:0005524: ATP binding	1.95E-03
36	GO:0017150: tRNA dihydrouridine synthase activity	2.04E-03
37	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.04E-03
38	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.11E-03
39	GO:0004722: protein serine/threonine phosphatase activity	2.33E-03
40	GO:0052634: C-19 gibberellin 2-beta-dioxygenase activity	2.96E-03
41	GO:0003916: DNA topoisomerase activity	2.96E-03
42	GO:0001872: (1->3)-beta-D-glucan binding	2.96E-03
43	GO:0004519: endonuclease activity	3.47E-03
44	GO:0016788: hydrolase activity, acting on ester bonds	3.53E-03
45	GO:0046983: protein dimerization activity	3.98E-03
46	GO:0019199: transmembrane receptor protein kinase activity	4.00E-03
47	GO:0004335: galactokinase activity	4.00E-03
48	GO:0016279: protein-lysine N-methyltransferase activity	4.00E-03
49	GO:0042936: dipeptide transporter activity	4.00E-03
50	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	4.00E-03
51	GO:0005345: purine nucleobase transmembrane transporter activity	4.15E-03
52	GO:0033612: receptor serine/threonine kinase binding	4.57E-03
53	GO:0008408: 3'-5' exonuclease activity	4.57E-03
54	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	5.13E-03
55	GO:0003989: acetyl-CoA carboxylase activity	5.13E-03
56	GO:0004674: protein serine/threonine kinase activity	5.49E-03
57	GO:0043621: protein self-association	6.24E-03
58	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	6.36E-03
59	GO:2001070: starch binding	6.36E-03
60	GO:1990714: hydroxyproline O-galactosyltransferase activity	6.36E-03
61	GO:0004709: MAP kinase kinase kinase activity	6.36E-03
62	GO:0005515: protein binding	6.89E-03
63	GO:0008017: microtubule binding	7.03E-03
64	GO:0004871: signal transducer activity	7.42E-03
65	GO:0016832: aldehyde-lyase activity	7.69E-03
66	GO:0016298: lipase activity	8.65E-03
67	GO:0000156: phosphorelay response regulator activity	1.06E-02
68	GO:0016847: 1-aminocyclopropane-1-carboxylate synthase activity	1.06E-02
69	GO:0009055: electron carrier activity	1.11E-02
70	GO:0016791: phosphatase activity	1.13E-02
71	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.22E-02
72	GO:0003951: NAD+ kinase activity	1.22E-02
73	GO:0008173: RNA methyltransferase activity	1.22E-02
74	GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity	1.22E-02
75	GO:0004672: protein kinase activity	1.27E-02
76	GO:0016413: O-acetyltransferase activity	1.28E-02
77	GO:0043565: sequence-specific DNA binding	1.30E-02
78	GO:0016887: ATPase activity	2.10E-02
79	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.13E-02
80	GO:0000049: tRNA binding	2.13E-02
81	GO:0003725: double-stranded RNA binding	2.33E-02
82	GO:0042803: protein homodimerization activity	2.47E-02
83	GO:0003712: transcription cofactor activity	2.76E-02
84	GO:0008146: sulfotransferase activity	2.76E-02
85	GO:0003677: DNA binding	3.16E-02
86	GO:0005198: structural molecule activity	3.27E-02
87	GO:0051087: chaperone binding	3.44E-02
88	GO:0042802: identical protein binding	3.51E-02
89	GO:0008094: DNA-dependent ATPase activity	3.68E-02
90	GO:0010333: terpene synthase activity	3.68E-02
91	GO:0008168: methyltransferase activity	4.27E-02
92	GO:0015171: amino acid transmembrane transporter activity	4.33E-02
93	GO:0000287: magnesium ion binding	4.37E-02
94	GO:0003727: single-stranded RNA binding	4.43E-02
95	GO:0004812: aminoacyl-tRNA ligase activity	4.69E-02

Rank	GO Term	Adjusted P value
1	GO:0000791: euchromatin	5.77E-04
2	GO:0000796: condensin complex	5.77E-04
3	GO:0005871: kinesin complex	8.44E-04
4	GO:0031357: integral component of chloroplast inner membrane	1.24E-03
5	GO:0030870: Mre11 complex	1.24E-03
6	GO:0000427: plastid-encoded plastid RNA polymerase complex	1.24E-03
7	GO:0019897: extrinsic component of plasma membrane	2.04E-03
8	GO:0008287: protein serine/threonine phosphatase complex	2.04E-03
9	GO:0030139: endocytic vesicle	2.04E-03
10	GO:0009317: acetyl-CoA carboxylase complex	2.04E-03
11	GO:0032585: multivesicular body membrane	2.96E-03
12	GO:0009330: DNA topoisomerase complex (ATP-hydrolyzing)	4.00E-03
13	GO:0005828: kinetochore microtubule	4.00E-03
14	GO:0000930: gamma-tubulin complex	4.00E-03
15	GO:0005874: microtubule	4.69E-03
16	GO:0000776: kinetochore	5.13E-03
17	GO:0000795: synaptonemal complex	5.13E-03
18	GO:0009570: chloroplast stroma	6.61E-03
19	GO:0005655: nucleolar ribonuclease P complex	7.69E-03
20	GO:0000777: condensed chromosome kinetochore	7.69E-03
21	GO:0000815: ESCRT III complex	7.69E-03
22	GO:0010369: chromocenter	7.69E-03
23	GO:0009536: plastid	8.37E-03
24	GO:0009986: cell surface	9.10E-03
25	GO:0009941: chloroplast envelope	1.01E-02
26	GO:0046658: anchored component of plasma membrane	1.01E-02
27	GO:0009501: amyloplast	1.06E-02
28	GO:0009534: chloroplast thylakoid	1.31E-02
29	GO:0005876: spindle microtubule	1.56E-02
30	GO:0005886: plasma membrane	1.79E-02
31	GO:0090404: pollen tube tip	1.93E-02
32	GO:0005884: actin filament	1.93E-02
33	GO:0009508: plastid chromosome	2.33E-02
34	GO:0005938: cell cortex	2.33E-02
35	GO:0030095: chloroplast photosystem II	2.54E-02
36	GO:0005875: microtubule associated complex	2.98E-02
37	GO:0009654: photosystem II oxygen evolving complex	3.44E-02
38	GO:0015629: actin cytoskeleton	4.18E-02
39	GO:0009507: chloroplast	4.47E-02