GO Enrichment Analysis of Co-expressed Genes with
AT5G02160
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 3 | GO:0035674: tricarboxylic acid transmembrane transport | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 4.79E-10 |
| 5 | GO:0015979: photosynthesis | 3.11E-09 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 2.65E-07 |
| 7 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 9.95E-07 |
| 8 | GO:0010206: photosystem II repair | 2.55E-06 |
| 9 | GO:0006000: fructose metabolic process | 3.72E-06 |
| 10 | GO:0090391: granum assembly | 3.72E-06 |
| 11 | GO:0005983: starch catabolic process | 7.76E-06 |
| 12 | GO:0006094: gluconeogenesis | 9.75E-06 |
| 13 | GO:0010207: photosystem II assembly | 1.21E-05 |
| 14 | GO:0009772: photosynthetic electron transport in photosystem II | 7.52E-05 |
| 15 | GO:0010196: nonphotochemical quenching | 7.52E-05 |
| 16 | GO:0006002: fructose 6-phosphate metabolic process | 1.22E-04 |
| 17 | GO:0032544: plastid translation | 1.22E-04 |
| 18 | GO:0055114: oxidation-reduction process | 1.39E-04 |
| 19 | GO:0006835: dicarboxylic acid transport | 1.42E-04 |
| 20 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.42E-04 |
| 21 | GO:0000023: maltose metabolic process | 1.42E-04 |
| 22 | GO:0000025: maltose catabolic process | 1.42E-04 |
| 23 | GO:0005980: glycogen catabolic process | 1.42E-04 |
| 24 | GO:0009631: cold acclimation | 2.70E-04 |
| 25 | GO:0034599: cellular response to oxidative stress | 3.24E-04 |
| 26 | GO:0005976: polysaccharide metabolic process | 3.25E-04 |
| 27 | GO:0010353: response to trehalose | 3.25E-04 |
| 28 | GO:0006729: tetrahydrobiopterin biosynthetic process | 3.25E-04 |
| 29 | GO:0005986: sucrose biosynthetic process | 3.27E-04 |
| 30 | GO:0006810: transport | 3.36E-04 |
| 31 | GO:0006636: unsaturated fatty acid biosynthetic process | 4.63E-04 |
| 32 | GO:0006518: peptide metabolic process | 5.33E-04 |
| 33 | GO:0006081: cellular aldehyde metabolic process | 5.33E-04 |
| 34 | GO:0009768: photosynthesis, light harvesting in photosystem I | 5.65E-04 |
| 35 | GO:0009735: response to cytokinin | 6.16E-04 |
| 36 | GO:0061077: chaperone-mediated protein folding | 6.19E-04 |
| 37 | GO:0071484: cellular response to light intensity | 7.63E-04 |
| 38 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.63E-04 |
| 39 | GO:0045727: positive regulation of translation | 1.01E-03 |
| 40 | GO:0015994: chlorophyll metabolic process | 1.01E-03 |
| 41 | GO:0000302: response to reactive oxygen species | 1.22E-03 |
| 42 | GO:0006461: protein complex assembly | 1.28E-03 |
| 43 | GO:1902456: regulation of stomatal opening | 1.57E-03 |
| 44 | GO:0010190: cytochrome b6f complex assembly | 1.57E-03 |
| 45 | GO:0042549: photosystem II stabilization | 1.57E-03 |
| 46 | GO:0006633: fatty acid biosynthetic process | 1.69E-03 |
| 47 | GO:0010027: thylakoid membrane organization | 1.74E-03 |
| 48 | GO:0010189: vitamin E biosynthetic process | 1.88E-03 |
| 49 | GO:0009854: oxidative photosynthetic carbon pathway | 1.88E-03 |
| 50 | GO:0010019: chloroplast-nucleus signaling pathway | 1.88E-03 |
| 51 | GO:0016311: dephosphorylation | 2.16E-03 |
| 52 | GO:0009610: response to symbiotic fungus | 2.21E-03 |
| 53 | GO:0018298: protein-chromophore linkage | 2.27E-03 |
| 54 | GO:0010218: response to far red light | 2.50E-03 |
| 55 | GO:0009642: response to light intensity | 2.56E-03 |
| 56 | GO:0030091: protein repair | 2.56E-03 |
| 57 | GO:0009637: response to blue light | 2.86E-03 |
| 58 | GO:0009657: plastid organization | 2.93E-03 |
| 59 | GO:0009658: chloroplast organization | 3.30E-03 |
| 60 | GO:0006098: pentose-phosphate shunt | 3.31E-03 |
| 61 | GO:0006754: ATP biosynthetic process | 3.31E-03 |
| 62 | GO:0010114: response to red light | 3.68E-03 |
| 63 | GO:0010205: photoinhibition | 3.71E-03 |
| 64 | GO:0009641: shade avoidance | 4.12E-03 |
| 65 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.55E-03 |
| 66 | GO:0043085: positive regulation of catalytic activity | 4.55E-03 |
| 67 | GO:0000272: polysaccharide catabolic process | 4.55E-03 |
| 68 | GO:0009750: response to fructose | 4.55E-03 |
| 69 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.55E-03 |
| 70 | GO:0009725: response to hormone | 5.45E-03 |
| 71 | GO:0010143: cutin biosynthetic process | 5.92E-03 |
| 72 | GO:0019253: reductive pentose-phosphate cycle | 5.92E-03 |
| 73 | GO:0010223: secondary shoot formation | 5.92E-03 |
| 74 | GO:0009266: response to temperature stimulus | 5.92E-03 |
| 75 | GO:0005985: sucrose metabolic process | 6.41E-03 |
| 76 | GO:0010025: wax biosynthetic process | 6.91E-03 |
| 77 | GO:0035428: hexose transmembrane transport | 9.05E-03 |
| 78 | GO:0042744: hydrogen peroxide catabolic process | 1.00E-02 |
| 79 | GO:0070417: cellular response to cold | 1.08E-02 |
| 80 | GO:0042631: cellular response to water deprivation | 1.14E-02 |
| 81 | GO:0000413: protein peptidyl-prolyl isomerization | 1.14E-02 |
| 82 | GO:0006662: glycerol ether metabolic process | 1.20E-02 |
| 83 | GO:0046323: glucose import | 1.20E-02 |
| 84 | GO:0015986: ATP synthesis coupled proton transport | 1.26E-02 |
| 85 | GO:0045893: positive regulation of transcription, DNA-templated | 1.76E-02 |
| 86 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.88E-02 |
| 87 | GO:0042254: ribosome biogenesis | 1.93E-02 |
| 88 | GO:0010311: lateral root formation | 2.26E-02 |
| 89 | GO:0080167: response to karrikin | 2.35E-02 |
| 90 | GO:0007568: aging | 2.42E-02 |
| 91 | GO:0009853: photorespiration | 2.59E-02 |
| 92 | GO:0006839: mitochondrial transport | 2.84E-02 |
| 93 | GO:0006631: fatty acid metabolic process | 2.93E-02 |
| 94 | GO:0006869: lipid transport | 3.08E-02 |
| 95 | GO:0009744: response to sucrose | 3.10E-02 |
| 96 | GO:0032259: methylation | 3.31E-02 |
| 97 | GO:0006629: lipid metabolic process | 3.46E-02 |
| 98 | GO:0042742: defense response to bacterium | 3.57E-02 |
| 99 | GO:0006979: response to oxidative stress | 3.60E-02 |
| 100 | GO:0006364: rRNA processing | 3.83E-02 |
| 101 | GO:0006412: translation | 4.20E-02 |
| 102 | GO:0006096: glycolytic process | 4.32E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 4 | GO:0015142: tricarboxylic acid transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 9.95E-07 |
| 6 | GO:0010297: heteropolysaccharide binding | 9.95E-07 |
| 7 | GO:0005528: FK506 binding | 2.11E-05 |
| 8 | GO:0004130: cytochrome-c peroxidase activity | 3.99E-05 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.37E-05 |
| 10 | GO:0050521: alpha-glucan, water dikinase activity | 1.42E-04 |
| 11 | GO:0008184: glycogen phosphorylase activity | 1.42E-04 |
| 12 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.42E-04 |
| 13 | GO:0045485: omega-6 fatty acid desaturase activity | 1.42E-04 |
| 14 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.42E-04 |
| 15 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.42E-04 |
| 16 | GO:0004134: 4-alpha-glucanotransferase activity | 1.42E-04 |
| 17 | GO:0004645: phosphorylase activity | 1.42E-04 |
| 18 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.42E-04 |
| 19 | GO:0019843: rRNA binding | 1.64E-04 |
| 20 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.80E-04 |
| 21 | GO:0008967: phosphoglycolate phosphatase activity | 3.25E-04 |
| 22 | GO:0018708: thiol S-methyltransferase activity | 3.25E-04 |
| 23 | GO:0016630: protochlorophyllide reductase activity | 3.25E-04 |
| 24 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.25E-04 |
| 25 | GO:0047746: chlorophyllase activity | 3.25E-04 |
| 26 | GO:0042389: omega-3 fatty acid desaturase activity | 3.25E-04 |
| 27 | GO:0031409: pigment binding | 4.63E-04 |
| 28 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 5.33E-04 |
| 29 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 5.33E-04 |
| 30 | GO:0070402: NADPH binding | 5.33E-04 |
| 31 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 5.33E-04 |
| 32 | GO:0019201: nucleotide kinase activity | 7.63E-04 |
| 33 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 7.63E-04 |
| 34 | GO:0016851: magnesium chelatase activity | 7.63E-04 |
| 35 | GO:0017077: oxidative phosphorylation uncoupler activity | 7.63E-04 |
| 36 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.01E-03 |
| 37 | GO:0048038: quinone binding | 1.22E-03 |
| 38 | GO:0004332: fructose-bisphosphate aldolase activity | 1.57E-03 |
| 39 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.57E-03 |
| 40 | GO:0016688: L-ascorbate peroxidase activity | 1.57E-03 |
| 41 | GO:2001070: starch binding | 1.57E-03 |
| 42 | GO:0016168: chlorophyll binding | 1.84E-03 |
| 43 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.88E-03 |
| 44 | GO:0102391: decanoate--CoA ligase activity | 1.88E-03 |
| 45 | GO:0004017: adenylate kinase activity | 1.88E-03 |
| 46 | GO:0004602: glutathione peroxidase activity | 1.88E-03 |
| 47 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.21E-03 |
| 48 | GO:0004033: aldo-keto reductase (NADP) activity | 2.56E-03 |
| 49 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.93E-03 |
| 50 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.98E-03 |
| 51 | GO:0016491: oxidoreductase activity | 4.00E-03 |
| 52 | GO:0008047: enzyme activator activity | 4.12E-03 |
| 53 | GO:0030234: enzyme regulator activity | 4.12E-03 |
| 54 | GO:0044183: protein binding involved in protein folding | 4.55E-03 |
| 55 | GO:0047372: acylglycerol lipase activity | 4.55E-03 |
| 56 | GO:0004565: beta-galactosidase activity | 5.45E-03 |
| 57 | GO:0031072: heat shock protein binding | 5.45E-03 |
| 58 | GO:0003735: structural constituent of ribosome | 8.22E-03 |
| 59 | GO:0003756: protein disulfide isomerase activity | 1.02E-02 |
| 60 | GO:0047134: protein-disulfide reductase activity | 1.08E-02 |
| 61 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.20E-02 |
| 62 | GO:0004791: thioredoxin-disulfide reductase activity | 1.26E-02 |
| 63 | GO:0005355: glucose transmembrane transporter activity | 1.26E-02 |
| 64 | GO:0050662: coenzyme binding | 1.26E-02 |
| 65 | GO:0004872: receptor activity | 1.33E-02 |
| 66 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.53E-02 |
| 67 | GO:0008168: methyltransferase activity | 1.82E-02 |
| 68 | GO:0016788: hydrolase activity, acting on ester bonds | 1.93E-02 |
| 69 | GO:0004222: metalloendopeptidase activity | 2.34E-02 |
| 70 | GO:0003746: translation elongation factor activity | 2.59E-02 |
| 71 | GO:0003993: acid phosphatase activity | 2.67E-02 |
| 72 | GO:0016787: hydrolase activity | 3.01E-02 |
| 73 | GO:0008289: lipid binding | 4.79E-02 |
| 74 | GO:0051082: unfolded protein binding | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 3.13E-47 |
| 3 | GO:0009534: chloroplast thylakoid | 4.53E-44 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.87E-39 |
| 5 | GO:0009941: chloroplast envelope | 1.54E-32 |
| 6 | GO:0009579: thylakoid | 1.18E-20 |
| 7 | GO:0009570: chloroplast stroma | 1.69E-14 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 4.66E-13 |
| 9 | GO:0031977: thylakoid lumen | 1.22E-11 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.05E-10 |
| 11 | GO:0009706: chloroplast inner membrane | 3.05E-07 |
| 12 | GO:0010287: plastoglobule | 5.20E-07 |
| 13 | GO:0031969: chloroplast membrane | 1.16E-04 |
| 14 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 3.25E-04 |
| 15 | GO:0031357: integral component of chloroplast inner membrane | 3.25E-04 |
| 16 | GO:0030095: chloroplast photosystem II | 3.70E-04 |
| 17 | GO:0030076: light-harvesting complex | 4.15E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 5.33E-04 |
| 19 | GO:0042651: thylakoid membrane | 5.65E-04 |
| 20 | GO:0005840: ribosome | 6.73E-04 |
| 21 | GO:0009544: chloroplast ATP synthase complex | 1.01E-03 |
| 22 | GO:0009522: photosystem I | 1.07E-03 |
| 23 | GO:0009523: photosystem II | 1.14E-03 |
| 24 | GO:0010319: stromule | 1.56E-03 |
| 25 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.57E-03 |
| 26 | GO:0009533: chloroplast stromal thylakoid | 2.21E-03 |
| 27 | GO:0009538: photosystem I reaction center | 2.56E-03 |
| 28 | GO:0016020: membrane | 2.83E-03 |
| 29 | GO:0015935: small ribosomal subunit | 8.49E-03 |
| 30 | GO:0016021: integral component of membrane | 1.56E-02 |
| 31 | GO:0009707: chloroplast outer membrane | 2.19E-02 |
| 32 | GO:0048046: apoplast | 2.31E-02 |
| 33 | GO:0015934: large ribosomal subunit | 2.42E-02 |