co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G01790

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0009069: serine family amino acid metabolic process	0.00E+00
2	GO:0070178: D-serine metabolic process	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0070272: proton-transporting ATP synthase complex biogenesis	0.00E+00
5	GO:0043686: co-translational protein modification	3.37E-05
6	GO:0043007: maintenance of rDNA	3.37E-05
7	GO:0005980: glycogen catabolic process	3.37E-05
8	GO:0010731: protein glutathionylation	2.18E-04
9	GO:1901657: glycosyl compound metabolic process	2.19E-04
10	GO:0022622: root system development	2.95E-04
11	GO:0031365: N-terminal protein amino acid modification	3.77E-04
12	GO:0009107: lipoate biosynthetic process	3.77E-04
13	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	4.63E-04
14	GO:0006563: L-serine metabolic process	4.63E-04
15	GO:0015979: photosynthesis	4.74E-04
16	GO:2000033: regulation of seed dormancy process	5.53E-04
17	GO:0032880: regulation of protein localization	6.47E-04
18	GO:0046916: cellular transition metal ion homeostasis	9.49E-04
19	GO:0046685: response to arsenic-containing substance	9.49E-04
20	GO:0045036: protein targeting to chloroplast	1.17E-03
21	GO:0019684: photosynthesis, light reaction	1.28E-03
22	GO:0009698: phenylpropanoid metabolic process	1.28E-03
23	GO:2000012: regulation of auxin polar transport	1.52E-03
24	GO:0009266: response to temperature stimulus	1.65E-03
25	GO:0009825: multidimensional cell growth	1.78E-03
26	GO:0006730: one-carbon metabolic process	2.48E-03
27	GO:0008284: positive regulation of cell proliferation	2.94E-03
28	GO:0009958: positive gravitropism	3.25E-03
29	GO:0006662: glycerol ether metabolic process	3.25E-03
30	GO:0009960: endosperm development	3.25E-03
31	GO:0045454: cell redox homeostasis	4.21E-03
32	GO:0009607: response to biotic stimulus	5.02E-03
33	GO:0015995: chlorophyll biosynthetic process	5.40E-03
34	GO:0005975: carbohydrate metabolic process	5.45E-03
35	GO:0008152: metabolic process	5.71E-03
36	GO:0048527: lateral root development	6.40E-03
37	GO:0034599: cellular response to oxidative stress	7.04E-03
38	GO:0030001: metal ion transport	7.47E-03
39	GO:0042538: hyperosmotic salinity response	9.54E-03
40	GO:0006508: proteolysis	1.33E-02
41	GO:0006413: translational initiation	1.80E-02
42	GO:0009658: chloroplast organization	2.58E-02
43	GO:0044550: secondary metabolite biosynthetic process	3.20E-02
44	GO:0016042: lipid catabolic process	3.89E-02
45	GO:0006281: DNA repair	3.97E-02

Rank	GO Term	Adjusted P value
1	GO:0097100: supercoiled DNA binding	0.00E+00
2	GO:0090711: FMN hydrolase activity	0.00E+00
3	GO:0030378: serine racemase activity	0.00E+00
4	GO:0003941: L-serine ammonia-lyase activity	0.00E+00
5	GO:0008721: D-serine ammonia-lyase activity	0.00E+00
6	GO:0004856: xylulokinase activity	3.37E-05
7	GO:0004645: phosphorylase activity	3.37E-05
8	GO:0008184: glycogen phosphorylase activity	3.37E-05
9	GO:0042586: peptide deformylase activity	3.37E-05
10	GO:0016630: protochlorophyllide reductase activity	8.48E-05
11	GO:0030385: ferredoxin:thioredoxin reductase activity	8.48E-05
12	GO:0045174: glutathione dehydrogenase (ascorbate) activity	1.47E-04
13	GO:0016992: lipoate synthase activity	1.47E-04
14	GO:0004148: dihydrolipoyl dehydrogenase activity	1.47E-04
15	GO:0102483: scopolin beta-glucosidase activity	3.31E-04
16	GO:0003959: NADPH dehydrogenase activity	3.77E-04
17	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.77E-04
18	GO:0008422: beta-glucosidase activity	5.04E-04
19	GO:0046914: transition metal ion binding	8.45E-04
20	GO:0016207: 4-coumarate-CoA ligase activity	9.49E-04
21	GO:0030170: pyridoxal phosphate binding	1.50E-03
22	GO:0004252: serine-type endopeptidase activity	1.50E-03
23	GO:0004089: carbonate dehydratase activity	1.52E-03
24	GO:0008083: growth factor activity	1.65E-03
25	GO:0047134: protein-disulfide reductase activity	2.94E-03
26	GO:0004791: thioredoxin-disulfide reductase activity	3.42E-03
27	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	4.10E-03
28	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.79E-03
29	GO:0051539: 4 iron, 4 sulfur cluster binding	7.47E-03
30	GO:0004364: glutathione transferase activity	7.91E-03
31	GO:0043621: protein self-association	8.60E-03
32	GO:0016298: lipase activity	1.03E-02
33	GO:0016874: ligase activity	1.23E-02
34	GO:0015035: protein disulfide oxidoreductase activity	1.31E-02
35	GO:0004386: helicase activity	1.37E-02
36	GO:0003743: translation initiation factor activity	2.11E-02
37	GO:0042802: identical protein binding	2.24E-02
38	GO:0016491: oxidoreductase activity	2.46E-02
39	GO:0050660: flavin adenine dinucleotide binding	2.87E-02
40	GO:0042803: protein homodimerization activity	3.54E-02
41	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	3.62E-02
42	GO:0003924: GTPase activity	3.97E-02
43	GO:0009055: electron carrier activity	4.18E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	1.52E-06
2	GO:0009941: chloroplast envelope	4.23E-05
3	GO:0009507: chloroplast	6.07E-05
4	GO:0009840: chloroplastic endopeptidase Clp complex	5.53E-04
5	GO:0009532: plastid stroma	2.33E-03
6	GO:0031969: chloroplast membrane	3.53E-03
7	GO:0009707: chloroplast outer membrane	5.79E-03
8	GO:0009534: chloroplast thylakoid	1.11E-02
9	GO:0009706: chloroplast inner membrane	1.28E-02
10	GO:0005623: cell	1.54E-02
11	GO:0005615: extracellular space	2.05E-02
12	GO:0009536: plastid	2.29E-02
13	GO:0046658: anchored component of plasma membrane	2.31E-02