GO Enrichment Analysis of Co-expressed Genes with
AT5G01090
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0070979: protein K11-linked ubiquitination | 0.00E+00 |
| 5 | GO:0010081: regulation of inflorescence meristem growth | 0.00E+00 |
| 6 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 7 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 8 | GO:0016123: xanthophyll biosynthetic process | 3.89E-05 |
| 9 | GO:0016117: carotenoid biosynthetic process | 8.16E-05 |
| 10 | GO:0070509: calcium ion import | 1.77E-04 |
| 11 | GO:0043266: regulation of potassium ion transport | 1.77E-04 |
| 12 | GO:0010080: regulation of floral meristem growth | 1.77E-04 |
| 13 | GO:2000021: regulation of ion homeostasis | 1.77E-04 |
| 14 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.77E-04 |
| 15 | GO:0000066: mitochondrial ornithine transport | 1.77E-04 |
| 16 | GO:0000373: Group II intron splicing | 2.09E-04 |
| 17 | GO:0048255: mRNA stabilization | 4.01E-04 |
| 18 | GO:0070588: calcium ion transmembrane transport | 5.64E-04 |
| 19 | GO:0009793: embryo development ending in seed dormancy | 5.72E-04 |
| 20 | GO:0031145: anaphase-promoting complex-dependent catabolic process | 6.55E-04 |
| 21 | GO:0080055: low-affinity nitrate transport | 6.55E-04 |
| 22 | GO:0006696: ergosterol biosynthetic process | 6.55E-04 |
| 23 | GO:0010022: meristem determinacy | 6.55E-04 |
| 24 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 6.55E-04 |
| 25 | GO:2001141: regulation of RNA biosynthetic process | 9.34E-04 |
| 26 | GO:0007231: osmosensory signaling pathway | 9.34E-04 |
| 27 | GO:0030071: regulation of mitotic metaphase/anaphase transition | 9.34E-04 |
| 28 | GO:0051639: actin filament network formation | 9.34E-04 |
| 29 | GO:0042989: sequestering of actin monomers | 9.34E-04 |
| 30 | GO:0033500: carbohydrate homeostasis | 1.24E-03 |
| 31 | GO:0051781: positive regulation of cell division | 1.24E-03 |
| 32 | GO:0051764: actin crosslink formation | 1.24E-03 |
| 33 | GO:0051322: anaphase | 1.24E-03 |
| 34 | GO:0006661: phosphatidylinositol biosynthetic process | 1.24E-03 |
| 35 | GO:0030041: actin filament polymerization | 1.57E-03 |
| 36 | GO:0010236: plastoquinone biosynthetic process | 1.57E-03 |
| 37 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.57E-03 |
| 38 | GO:0009107: lipoate biosynthetic process | 1.57E-03 |
| 39 | GO:1902183: regulation of shoot apical meristem development | 1.57E-03 |
| 40 | GO:0010158: abaxial cell fate specification | 1.57E-03 |
| 41 | GO:0032876: negative regulation of DNA endoreduplication | 1.57E-03 |
| 42 | GO:0080110: sporopollenin biosynthetic process | 1.57E-03 |
| 43 | GO:0051510: regulation of unidimensional cell growth | 2.74E-03 |
| 44 | GO:0015693: magnesium ion transport | 2.74E-03 |
| 45 | GO:0048528: post-embryonic root development | 2.74E-03 |
| 46 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.74E-03 |
| 47 | GO:0032875: regulation of DNA endoreduplication | 3.17E-03 |
| 48 | GO:0010492: maintenance of shoot apical meristem identity | 3.17E-03 |
| 49 | GO:0000105: histidine biosynthetic process | 3.17E-03 |
| 50 | GO:0048564: photosystem I assembly | 3.17E-03 |
| 51 | GO:0042255: ribosome assembly | 3.17E-03 |
| 52 | GO:0006353: DNA-templated transcription, termination | 3.17E-03 |
| 53 | GO:0032544: plastid translation | 3.63E-03 |
| 54 | GO:0071482: cellular response to light stimulus | 3.63E-03 |
| 55 | GO:0022900: electron transport chain | 3.63E-03 |
| 56 | GO:0009657: plastid organization | 3.63E-03 |
| 57 | GO:0010206: photosystem II repair | 4.10E-03 |
| 58 | GO:2000024: regulation of leaf development | 4.10E-03 |
| 59 | GO:0048507: meristem development | 4.10E-03 |
| 60 | GO:0006839: mitochondrial transport | 4.45E-03 |
| 61 | GO:0009658: chloroplast organization | 4.93E-03 |
| 62 | GO:0006535: cysteine biosynthetic process from serine | 5.11E-03 |
| 63 | GO:1903507: negative regulation of nucleic acid-templated transcription | 5.65E-03 |
| 64 | GO:0006352: DNA-templated transcription, initiation | 5.65E-03 |
| 65 | GO:0006816: calcium ion transport | 5.65E-03 |
| 66 | GO:0006415: translational termination | 5.65E-03 |
| 67 | GO:0045037: protein import into chloroplast stroma | 6.20E-03 |
| 68 | GO:0010582: floral meristem determinacy | 6.20E-03 |
| 69 | GO:0006094: gluconeogenesis | 6.78E-03 |
| 70 | GO:0010207: photosystem II assembly | 7.37E-03 |
| 71 | GO:0090351: seedling development | 7.98E-03 |
| 72 | GO:0048316: seed development | 8.28E-03 |
| 73 | GO:0009944: polarity specification of adaxial/abaxial axis | 9.26E-03 |
| 74 | GO:0051017: actin filament bundle assembly | 9.26E-03 |
| 75 | GO:0006289: nucleotide-excision repair | 9.26E-03 |
| 76 | GO:0019344: cysteine biosynthetic process | 9.26E-03 |
| 77 | GO:0007010: cytoskeleton organization | 9.26E-03 |
| 78 | GO:0006418: tRNA aminoacylation for protein translation | 9.92E-03 |
| 79 | GO:0015992: proton transport | 1.06E-02 |
| 80 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.13E-02 |
| 81 | GO:0035428: hexose transmembrane transport | 1.13E-02 |
| 82 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.20E-02 |
| 83 | GO:0010584: pollen exine formation | 1.27E-02 |
| 84 | GO:0019722: calcium-mediated signaling | 1.27E-02 |
| 85 | GO:0008033: tRNA processing | 1.43E-02 |
| 86 | GO:0034220: ion transmembrane transport | 1.43E-02 |
| 87 | GO:0010087: phloem or xylem histogenesis | 1.43E-02 |
| 88 | GO:0046323: glucose import | 1.50E-02 |
| 89 | GO:0010268: brassinosteroid homeostasis | 1.50E-02 |
| 90 | GO:0010154: fruit development | 1.50E-02 |
| 91 | GO:0008654: phospholipid biosynthetic process | 1.66E-02 |
| 92 | GO:0009451: RNA modification | 1.71E-02 |
| 93 | GO:0016132: brassinosteroid biosynthetic process | 1.75E-02 |
| 94 | GO:0032502: developmental process | 1.83E-02 |
| 95 | GO:0007264: small GTPase mediated signal transduction | 1.83E-02 |
| 96 | GO:0006914: autophagy | 2.00E-02 |
| 97 | GO:0009828: plant-type cell wall loosening | 2.00E-02 |
| 98 | GO:0016125: sterol metabolic process | 2.00E-02 |
| 99 | GO:0007267: cell-cell signaling | 2.09E-02 |
| 100 | GO:0000910: cytokinesis | 2.18E-02 |
| 101 | GO:0016126: sterol biosynthetic process | 2.27E-02 |
| 102 | GO:0016311: dephosphorylation | 2.64E-02 |
| 103 | GO:0048481: plant ovule development | 2.74E-02 |
| 104 | GO:0018298: protein-chromophore linkage | 2.74E-02 |
| 105 | GO:0009817: defense response to fungus, incompatible interaction | 2.74E-02 |
| 106 | GO:0007568: aging | 3.04E-02 |
| 107 | GO:0048527: lateral root development | 3.04E-02 |
| 108 | GO:0080167: response to karrikin | 3.22E-02 |
| 109 | GO:0009637: response to blue light | 3.24E-02 |
| 110 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.33E-02 |
| 111 | GO:0006631: fatty acid metabolic process | 3.67E-02 |
| 112 | GO:0008283: cell proliferation | 3.88E-02 |
| 113 | GO:0010114: response to red light | 3.88E-02 |
| 114 | GO:0031347: regulation of defense response | 4.45E-02 |
| 115 | GO:0009664: plant-type cell wall organization | 4.56E-02 |
| 116 | GO:0042538: hyperosmotic salinity response | 4.56E-02 |
| 117 | GO:0006364: rRNA processing | 4.80E-02 |
| 118 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.92E-02 |
| 119 | GO:0006397: mRNA processing | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010357: homogentisate solanesyltransferase activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0010355: homogentisate farnesyltransferase activity | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0005048: signal sequence binding | 0.00E+00 |
| 6 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 7 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 8 | GO:0010356: homogentisate geranylgeranyltransferase activity | 0.00E+00 |
| 9 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 10 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 11 | GO:0004612: phosphoenolpyruvate carboxykinase (ATP) activity | 1.77E-04 |
| 12 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.77E-04 |
| 13 | GO:0004830: tryptophan-tRNA ligase activity | 1.77E-04 |
| 14 | GO:0003879: ATP phosphoribosyltransferase activity | 1.77E-04 |
| 15 | GO:0003881: CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity | 1.77E-04 |
| 16 | GO:0005290: L-histidine transmembrane transporter activity | 1.77E-04 |
| 17 | GO:0051996: squalene synthase activity | 1.77E-04 |
| 18 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.01E-04 |
| 19 | GO:0050017: L-3-cyanoalanine synthase activity | 4.01E-04 |
| 20 | GO:0010291: carotene beta-ring hydroxylase activity | 4.01E-04 |
| 21 | GO:0000064: L-ornithine transmembrane transporter activity | 4.01E-04 |
| 22 | GO:0031072: heat shock protein binding | 4.47E-04 |
| 23 | GO:0005262: calcium channel activity | 4.47E-04 |
| 24 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 6.55E-04 |
| 25 | GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups | 6.55E-04 |
| 26 | GO:0016992: lipoate synthase activity | 6.55E-04 |
| 27 | GO:0003913: DNA photolyase activity | 6.55E-04 |
| 28 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 9.34E-04 |
| 29 | GO:0016149: translation release factor activity, codon specific | 9.34E-04 |
| 30 | GO:0004300: enoyl-CoA hydratase activity | 9.34E-04 |
| 31 | GO:0015189: L-lysine transmembrane transporter activity | 9.34E-04 |
| 32 | GO:0015181: arginine transmembrane transporter activity | 9.34E-04 |
| 33 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 9.34E-04 |
| 34 | GO:0070628: proteasome binding | 1.24E-03 |
| 35 | GO:0001053: plastid sigma factor activity | 1.24E-03 |
| 36 | GO:0016987: sigma factor activity | 1.24E-03 |
| 37 | GO:0070696: transmembrane receptor protein serine/threonine kinase binding | 1.57E-03 |
| 38 | GO:0003785: actin monomer binding | 1.57E-03 |
| 39 | GO:0031593: polyubiquitin binding | 1.94E-03 |
| 40 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.32E-03 |
| 41 | GO:0004124: cysteine synthase activity | 2.32E-03 |
| 42 | GO:0004427: inorganic diphosphatase activity | 2.74E-03 |
| 43 | GO:0009881: photoreceptor activity | 2.74E-03 |
| 44 | GO:0043022: ribosome binding | 3.17E-03 |
| 45 | GO:0008312: 7S RNA binding | 3.17E-03 |
| 46 | GO:0003723: RNA binding | 3.95E-03 |
| 47 | GO:0003747: translation release factor activity | 4.10E-03 |
| 48 | GO:0004161: dimethylallyltranstransferase activity | 5.65E-03 |
| 49 | GO:0015095: magnesium ion transmembrane transporter activity | 6.78E-03 |
| 50 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 7.37E-03 |
| 51 | GO:0031418: L-ascorbic acid binding | 9.26E-03 |
| 52 | GO:0043130: ubiquitin binding | 9.26E-03 |
| 53 | GO:0003714: transcription corepressor activity | 9.26E-03 |
| 54 | GO:0051082: unfolded protein binding | 9.66E-03 |
| 55 | GO:0030570: pectate lyase activity | 1.20E-02 |
| 56 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.24E-02 |
| 57 | GO:0003727: single-stranded RNA binding | 1.27E-02 |
| 58 | GO:0003756: protein disulfide isomerase activity | 1.27E-02 |
| 59 | GO:0004812: aminoacyl-tRNA ligase activity | 1.35E-02 |
| 60 | GO:0008536: Ran GTPase binding | 1.50E-02 |
| 61 | GO:0005506: iron ion binding | 1.52E-02 |
| 62 | GO:0005355: glucose transmembrane transporter activity | 1.58E-02 |
| 63 | GO:0050662: coenzyme binding | 1.58E-02 |
| 64 | GO:0010181: FMN binding | 1.58E-02 |
| 65 | GO:0051015: actin filament binding | 1.91E-02 |
| 66 | GO:0003684: damaged DNA binding | 2.00E-02 |
| 67 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.09E-02 |
| 68 | GO:0015250: water channel activity | 2.27E-02 |
| 69 | GO:0008236: serine-type peptidase activity | 2.64E-02 |
| 70 | GO:0003746: translation elongation factor activity | 3.24E-02 |
| 71 | GO:0004185: serine-type carboxypeptidase activity | 3.88E-02 |
| 72 | GO:0004871: signal transducer activity | 4.03E-02 |
| 73 | GO:0005525: GTP binding | 4.08E-02 |
| 74 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.11E-02 |
| 75 | GO:0003924: GTPase activity | 4.73E-02 |
| 76 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.80E-02 |
| 77 | GO:0003690: double-stranded DNA binding | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.75E-16 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 1.38E-04 |
| 3 | GO:0009570: chloroplast stroma | 3.16E-04 |
| 4 | GO:0009941: chloroplast envelope | 3.56E-04 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 4.01E-04 |
| 6 | GO:0009508: plastid chromosome | 4.47E-04 |
| 7 | GO:0032432: actin filament bundle | 9.34E-04 |
| 8 | GO:0030663: COPI-coated vesicle membrane | 1.24E-03 |
| 9 | GO:0031969: chloroplast membrane | 1.24E-03 |
| 10 | GO:0009295: nucleoid | 2.12E-03 |
| 11 | GO:0030529: intracellular ribonucleoprotein complex | 2.38E-03 |
| 12 | GO:0042807: central vacuole | 2.74E-03 |
| 13 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.63E-03 |
| 14 | GO:0000326: protein storage vacuole | 3.63E-03 |
| 15 | GO:0005680: anaphase-promoting complex | 4.10E-03 |
| 16 | GO:0016604: nuclear body | 4.60E-03 |
| 17 | GO:0030125: clathrin vesicle coat | 5.11E-03 |
| 18 | GO:0005884: actin filament | 5.65E-03 |
| 19 | GO:0000311: plastid large ribosomal subunit | 6.20E-03 |
| 20 | GO:0009574: preprophase band | 6.78E-03 |
| 21 | GO:0005578: proteinaceous extracellular matrix | 6.78E-03 |
| 22 | GO:0005938: cell cortex | 6.78E-03 |
| 23 | GO:0009579: thylakoid | 7.04E-03 |
| 24 | GO:0030176: integral component of endoplasmic reticulum membrane | 7.98E-03 |
| 25 | GO:0042651: thylakoid membrane | 9.92E-03 |
| 26 | GO:0009654: photosystem II oxygen evolving complex | 9.92E-03 |
| 27 | GO:0009532: plastid stroma | 1.06E-02 |
| 28 | GO:0015629: actin cytoskeleton | 1.20E-02 |
| 29 | GO:0009543: chloroplast thylakoid lumen | 1.21E-02 |
| 30 | GO:0019898: extrinsic component of membrane | 1.66E-02 |
| 31 | GO:0009705: plant-type vacuole membrane | 1.68E-02 |
| 32 | GO:0009536: plastid | 2.12E-02 |
| 33 | GO:0015934: large ribosomal subunit | 3.04E-02 |
| 34 | GO:0005874: microtubule | 3.11E-02 |
| 35 | GO:0031977: thylakoid lumen | 3.67E-02 |
| 36 | GO:0031225: anchored component of membrane | 3.83E-02 |
| 37 | GO:0005856: cytoskeleton | 4.22E-02 |
| 38 | GO:0005743: mitochondrial inner membrane | 4.40E-02 |