co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G39890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
2	GO:0002764: immune response-regulating signaling pathway	0.00E+00
3	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
4	GO:0009697: salicylic acid biosynthetic process	5.04E-07
5	GO:0006952: defense response	6.30E-07
6	GO:0010200: response to chitin	7.20E-07
7	GO:0009816: defense response to bacterium, incompatible interaction	3.22E-05
8	GO:0060548: negative regulation of cell death	3.85E-05
9	GO:0045088: regulation of innate immune response	3.85E-05
10	GO:0080142: regulation of salicylic acid biosynthetic process	3.85E-05
11	GO:0070588: calcium ion transmembrane transport	4.59E-05
12	GO:0046470: phosphatidylcholine metabolic process	1.64E-04
13	GO:0010365: positive regulation of ethylene biosynthetic process	2.34E-04
14	GO:0051938: L-glutamate import	2.34E-04
15	GO:0051245: negative regulation of cellular defense response	2.34E-04
16	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.34E-04
17	GO:0010421: hydrogen peroxide-mediated programmed cell death	2.34E-04
18	GO:0006643: membrane lipid metabolic process	2.34E-04
19	GO:0007229: integrin-mediated signaling pathway	2.34E-04
20	GO:0009270: response to humidity	2.34E-04
21	GO:0080157: regulation of plant-type cell wall organization or biogenesis	2.34E-04
22	GO:0006468: protein phosphorylation	2.52E-04
23	GO:0009626: plant-type hypersensitive response	3.00E-04
24	GO:0090333: regulation of stomatal closure	3.13E-04
25	GO:0007064: mitotic sister chromatid cohesion	4.36E-04
26	GO:0043069: negative regulation of programmed cell death	4.36E-04
27	GO:0015802: basic amino acid transport	5.20E-04
28	GO:0019725: cellular homeostasis	5.20E-04
29	GO:0002221: pattern recognition receptor signaling pathway	5.20E-04
30	GO:0043091: L-arginine import	5.20E-04
31	GO:0046777: protein autophosphorylation	5.22E-04
32	GO:0010186: positive regulation of cellular defense response	8.44E-04
33	GO:0048281: inflorescence morphogenesis	8.44E-04
34	GO:0016045: detection of bacterium	8.44E-04
35	GO:0009062: fatty acid catabolic process	8.44E-04
36	GO:1900140: regulation of seedling development	8.44E-04
37	GO:0010359: regulation of anion channel activity	8.44E-04
38	GO:0051176: positive regulation of sulfur metabolic process	8.44E-04
39	GO:0045793: positive regulation of cell size	8.44E-04
40	GO:0046713: borate transport	1.20E-03
41	GO:0002679: respiratory burst involved in defense response	1.20E-03
42	GO:0010306: rhamnogalacturonan II biosynthetic process	1.20E-03
43	GO:0006612: protein targeting to membrane	1.20E-03
44	GO:0046836: glycolipid transport	1.20E-03
45	GO:0000187: activation of MAPK activity	1.20E-03
46	GO:0009814: defense response, incompatible interaction	1.33E-03
47	GO:0016226: iron-sulfur cluster assembly	1.33E-03
48	GO:0031348: negative regulation of defense response	1.33E-03
49	GO:0006486: protein glycosylation	1.49E-03
50	GO:0046345: abscisic acid catabolic process	1.61E-03
51	GO:0010483: pollen tube reception	1.61E-03
52	GO:0010363: regulation of plant-type hypersensitive response	1.61E-03
53	GO:0010508: positive regulation of autophagy	1.61E-03
54	GO:0010225: response to UV-C	2.05E-03
55	GO:0002229: defense response to oomycetes	2.43E-03
56	GO:0010405: arabinogalactan protein metabolic process	2.52E-03
57	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.52E-03
58	GO:1900425: negative regulation of defense response to bacterium	2.52E-03
59	GO:0009742: brassinosteroid mediated signaling pathway	2.52E-03
60	GO:2000037: regulation of stomatal complex patterning	3.03E-03
61	GO:0042372: phylloquinone biosynthetic process	3.03E-03
62	GO:0010044: response to aluminum ion	3.58E-03
63	GO:0010161: red light signaling pathway	3.58E-03
64	GO:1900056: negative regulation of leaf senescence	3.58E-03
65	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.58E-03
66	GO:0007165: signal transduction	3.58E-03
67	GO:0008219: cell death	4.57E-03
68	GO:0010150: leaf senescence	4.68E-03
69	GO:0043562: cellular response to nitrogen levels	4.74E-03
70	GO:0010099: regulation of photomorphogenesis	4.74E-03
71	GO:0010204: defense response signaling pathway, resistance gene-independent	4.74E-03
72	GO:0030968: endoplasmic reticulum unfolded protein response	4.74E-03
73	GO:0009051: pentose-phosphate shunt, oxidative branch	5.37E-03
74	GO:0051865: protein autoubiquitination	5.37E-03
75	GO:0010112: regulation of systemic acquired resistance	5.37E-03
76	GO:0007166: cell surface receptor signaling pathway	5.55E-03
77	GO:0010468: regulation of gene expression	5.86E-03
78	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.03E-03
79	GO:0006032: chitin catabolic process	6.71E-03
80	GO:0000272: polysaccharide catabolic process	7.43E-03
81	GO:0008361: regulation of cell size	8.17E-03
82	GO:0012501: programmed cell death	8.17E-03
83	GO:0042742: defense response to bacterium	8.64E-03
84	GO:0006855: drug transmembrane transport	8.71E-03
85	GO:0055046: microgametogenesis	8.93E-03
86	GO:0009785: blue light signaling pathway	8.93E-03
87	GO:0006006: glucose metabolic process	8.93E-03
88	GO:0010229: inflorescence development	8.93E-03
89	GO:0010540: basipetal auxin transport	9.72E-03
90	GO:0009266: response to temperature stimulus	9.72E-03
91	GO:0002237: response to molecule of bacterial origin	9.72E-03
92	GO:0007034: vacuolar transport	9.72E-03
93	GO:0009969: xyloglucan biosynthetic process	1.05E-02
94	GO:0009909: regulation of flower development	1.12E-02
95	GO:0006487: protein N-linked glycosylation	1.22E-02
96	GO:0009863: salicylic acid mediated signaling pathway	1.22E-02
97	GO:0009620: response to fungus	1.31E-02
98	GO:0009269: response to desiccation	1.40E-02
99	GO:0048278: vesicle docking	1.40E-02
100	GO:0003333: amino acid transmembrane transport	1.40E-02
101	GO:0016998: cell wall macromolecule catabolic process	1.40E-02
102	GO:0071456: cellular response to hypoxia	1.50E-02
103	GO:0010017: red or far-red light signaling pathway	1.50E-02
104	GO:0009625: response to insect	1.59E-02
105	GO:0010227: floral organ abscission	1.59E-02
106	GO:0010584: pollen exine formation	1.69E-02
107	GO:0009751: response to salicylic acid	1.73E-02
108	GO:0010118: stomatal movement	1.89E-02
109	GO:0042631: cellular response to water deprivation	1.89E-02
110	GO:0042391: regulation of membrane potential	1.89E-02
111	GO:0010197: polar nucleus fusion	1.99E-02
112	GO:0061025: membrane fusion	2.10E-02
113	GO:0009646: response to absence of light	2.10E-02
114	GO:0050832: defense response to fungus	2.10E-02
115	GO:0008654: phospholipid biosynthetic process	2.20E-02
116	GO:0000302: response to reactive oxygen species	2.31E-02
117	GO:0006635: fatty acid beta-oxidation	2.31E-02
118	GO:0009630: gravitropism	2.42E-02
119	GO:0016032: viral process	2.42E-02
120	GO:0006979: response to oxidative stress	2.85E-02
121	GO:0006470: protein dephosphorylation	2.85E-02
122	GO:0009617: response to bacterium	2.97E-02
123	GO:0009911: positive regulation of flower development	3.01E-02
124	GO:0001666: response to hypoxia	3.01E-02
125	GO:0009737: response to abscisic acid	3.14E-02
126	GO:0009627: systemic acquired resistance	3.25E-02
127	GO:0006906: vesicle fusion	3.25E-02
128	GO:0048573: photoperiodism, flowering	3.38E-02
129	GO:0006950: response to stress	3.38E-02
130	GO:0016049: cell growth	3.50E-02
131	GO:0010311: lateral root formation	3.76E-02
132	GO:0009832: plant-type cell wall biogenesis	3.76E-02
133	GO:0035556: intracellular signal transduction	3.85E-02
134	GO:0048527: lateral root development	4.03E-02
135	GO:0010119: regulation of stomatal movement	4.03E-02
136	GO:0009867: jasmonic acid mediated signaling pathway	4.30E-02
137	GO:0045087: innate immune response	4.30E-02
138	GO:0080167: response to karrikin	4.76E-02
139	GO:0006887: exocytosis	4.85E-02
140	GO:0042542: response to hydrogen peroxide	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0004168: dolichol kinase activity	0.00E+00
2	GO:0016301: kinase activity	3.04E-05
3	GO:0005388: calcium-transporting ATPase activity	3.12E-05
4	GO:0004674: protein serine/threonine kinase activity	1.47E-04
5	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.09E-04
6	GO:0008809: carnitine racemase activity	2.34E-04
7	GO:0015085: calcium ion transmembrane transporter activity	2.34E-04
8	GO:0008909: isochorismate synthase activity	2.34E-04
9	GO:0031127: alpha-(1,2)-fucosyltransferase activity	2.34E-04
10	GO:0004630: phospholipase D activity	2.59E-04
11	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.59E-04
12	GO:0005516: calmodulin binding	3.68E-04
13	GO:0043531: ADP binding	3.69E-04
14	GO:0022821: potassium ion antiporter activity	5.20E-04
15	GO:0001671: ATPase activator activity	5.20E-04
16	GO:0005509: calcium ion binding	6.03E-04
17	GO:0005524: ATP binding	7.22E-04
18	GO:0016595: glutamate binding	8.44E-04
19	GO:0043424: protein histidine kinase binding	1.11E-03
20	GO:0015189: L-lysine transmembrane transporter activity	1.20E-03
21	GO:0017089: glycolipid transporter activity	1.20E-03
22	GO:0015181: arginine transmembrane transporter activity	1.20E-03
23	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.20E-03
24	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.20E-03
25	GO:0033612: receptor serine/threonine kinase binding	1.21E-03
26	GO:0004345: glucose-6-phosphate dehydrogenase activity	1.61E-03
27	GO:0051861: glycolipid binding	1.61E-03
28	GO:0005313: L-glutamate transmembrane transporter activity	1.61E-03
29	GO:0019199: transmembrane receptor protein kinase activity	1.61E-03
30	GO:0008234: cysteine-type peptidase activity	1.70E-03
31	GO:0010294: abscisic acid glucosyltransferase activity	2.05E-03
32	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	2.05E-03
33	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.05E-03
34	GO:0004605: phosphatidate cytidylyltransferase activity	2.52E-03
35	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.52E-03
36	GO:0035252: UDP-xylosyltransferase activity	2.52E-03
37	GO:0004012: phospholipid-translocating ATPase activity	3.03E-03
38	GO:0004143: diacylglycerol kinase activity	3.58E-03
39	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	3.58E-03
40	GO:0005544: calcium-dependent phospholipid binding	4.15E-03
41	GO:0004708: MAP kinase kinase activity	4.15E-03
42	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.28E-03
43	GO:0003951: NAD+ kinase activity	4.74E-03
44	GO:0015238: drug transmembrane transporter activity	4.80E-03
45	GO:0008417: fucosyltransferase activity	5.37E-03
46	GO:0015174: basic amino acid transmembrane transporter activity	6.03E-03
47	GO:0004568: chitinase activity	6.71E-03
48	GO:0008171: O-methyltransferase activity	6.71E-03
49	GO:0008047: enzyme activator activity	6.71E-03
50	GO:0008378: galactosyltransferase activity	8.17E-03
51	GO:0004521: endoribonuclease activity	8.17E-03
52	GO:0015095: magnesium ion transmembrane transporter activity	8.93E-03
53	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.93E-03
54	GO:0030552: cAMP binding	1.05E-02
55	GO:0030553: cGMP binding	1.05E-02
56	GO:0008061: chitin binding	1.05E-02
57	GO:0051087: chaperone binding	1.31E-02
58	GO:0005216: ion channel activity	1.31E-02
59	GO:0004707: MAP kinase activity	1.40E-02
60	GO:0004672: protein kinase activity	1.68E-02
61	GO:0005249: voltage-gated potassium channel activity	1.89E-02
62	GO:0030551: cyclic nucleotide binding	1.89E-02
63	GO:0010181: FMN binding	2.10E-02
64	GO:0015297: antiporter activity	2.38E-02
65	GO:0004197: cysteine-type endopeptidase activity	2.42E-02
66	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.77E-02
67	GO:0008375: acetylglucosaminyltransferase activity	3.25E-02
68	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.25E-02
69	GO:0005215: transporter activity	3.26E-02
70	GO:0004683: calmodulin-dependent protein kinase activity	3.38E-02
71	GO:0004806: triglyceride lipase activity	3.38E-02
72	GO:0004721: phosphoprotein phosphatase activity	3.38E-02
73	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.50E-02
74	GO:0004222: metalloendopeptidase activity	3.89E-02
75	GO:0003682: chromatin binding	4.07E-02
76	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.43E-02
77	GO:0004842: ubiquitin-protein transferase activity	4.49E-02
78	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.57E-02
79	GO:0000149: SNARE binding	4.57E-02
80	GO:0050661: NADP binding	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.01E-05
2	GO:0005901: caveola	5.20E-04
3	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.44E-04
4	GO:0016021: integral component of membrane	1.13E-03
5	GO:0005887: integral component of plasma membrane	6.52E-03
6	GO:0031012: extracellular matrix	8.93E-03
7	GO:0030176: integral component of endoplasmic reticulum membrane	1.05E-02
8	GO:0043234: protein complex	1.14E-02
9	GO:0005769: early endosome	1.14E-02
10	GO:0005758: mitochondrial intermembrane space	1.22E-02
11	GO:0012505: endomembrane system	1.40E-02
12	GO:0043231: intracellular membrane-bounded organelle	1.99E-02
13	GO:0032580: Golgi cisterna membrane	2.65E-02
14	GO:0031201: SNARE complex	4.85E-02